Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_G22
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 273 6e-74
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 273 6e-74
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 273 6e-74
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 273 6e-74
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 273 6e-74
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 273 6e-74
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 272 1e-73
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 272 1e-73
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 272 1e-73
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 266 7e-72
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 259 1e-69
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 142 3e-34
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 125 2e-29
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 118 4e-27
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 97 8e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 93 2e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 76 2e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 76 2e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 3.9
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 9.1
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 273 bits (670), Expect = 6e-74
Identities = 125/134 (93%), Positives = 130/134 (97%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVIT+G ERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
GTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 273 bits (670), Expect = 6e-74
Identities = 125/134 (93%), Positives = 130/134 (97%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVIT+G ERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
GTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 273 bits (670), Expect = 6e-74
Identities = 125/134 (93%), Positives = 130/134 (97%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVIT+G ERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
GTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 273 bits (670), Expect = 6e-74
Identities = 125/134 (93%), Positives = 130/134 (97%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVIT+G ERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SG
Sbjct: 199 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 258
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
GTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 259 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 318
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 319 YDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 273 bits (670), Expect = 6e-74
Identities = 125/134 (93%), Positives = 130/134 (97%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVIT+G ERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SG
Sbjct: 229 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 288
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
GTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 289 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 348
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 349 YDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 273 bits (670), Expect = 6e-74
Identities = 125/134 (93%), Positives = 130/134 (97%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVIT+G ERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
GTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 272 bits (668), Expect = 1e-73
Identities = 124/134 (92%), Positives = 130/134 (97%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVIT+G ERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
GTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 272 bits (668), Expect = 1e-73
Identities = 124/134 (92%), Positives = 130/134 (97%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVIT+G ERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
GTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 272 bits (668), Expect = 1e-73
Identities = 124/134 (92%), Positives = 130/134 (97%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVIT+G ERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
GTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 303 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 363 YDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 266 bits (653), Expect = 7e-72
Identities = 123/134 (91%), Positives = 129/134 (96%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVIT+G ERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SG
Sbjct: 243 LPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
GTTMYPGIADRMQKEITALAP T+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 303 GTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 362 YDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 259 bits (635), Expect = 1e-69
Identities = 118/134 (88%), Positives = 125/134 (93%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDGQVITIG ERFRCPE LFQP+F+GME GIHET Y SIMKCDVDIRKDLYANTV+SG
Sbjct: 242 LPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSG 301
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
GT+M+PGIADRMQKEI LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQMWISK+E
Sbjct: 302 GTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 361
Query: 309 YDESGPGIVHRKCF 268
YDESGP IVHRKCF
Sbjct: 362 YDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 142 bits (343), Expect = 3e-34
Identities = 65/134 (48%), Positives = 89/134 (66%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPD I I FR PE LF+P +G E G+ V SIMKCDVD+R+ LY+N V+SG
Sbjct: 241 LPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSG 300
Query: 489 GTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
GTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+E
Sbjct: 301 GTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKE 360
Query: 309 YDESGPGIVHRKCF 268
Y++ G +H++ F
Sbjct: 361 YEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 125 bits (302), Expect = 2e-29
Identities = 62/138 (44%), Positives = 86/138 (62%), Gaps = 13/138 (9%)
Frame = -2
Query: 669 LPDGQVITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSG 490
LPDG+VI +G ERF PE LFQP + +E G+ E ++ I D+D R D Y + V+SG
Sbjct: 246 LPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSG 305
Query: 489 GTTMYPGIADRMQKEITAL-----------APSTIKIKIIAPPERKYSVWIGGSILASL- 346
GTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 306 GTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLM 365
Query: 345 -STFQQMWISKEEYDESG 295
Q W+SK+EY+E G
Sbjct: 366 KDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 118 bits (284), Expect = 4e-27
Identities = 59/140 (42%), Positives = 79/140 (56%), Gaps = 8/140 (5%)
Frame = -2
Query: 666 PDGQVITIGXERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLYANT 502
P+G G ER + PE LF +L E + + S D+DIR L++N
Sbjct: 296 PNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNV 355
Query: 501 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIGGSILASLSTFQQ 331
++GG ++ G +R+ + P TIK+++ A P ERKY WIGGSIL SL TFQQ
Sbjct: 356 TVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQ 415
Query: 330 MWISKEEYDESGPGIVHRKC 271
MW+SK EYDESG IV +KC
Sbjct: 416 MWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 97.5 bits (232), Expect = 8e-21
Identities = 39/112 (34%), Positives = 74/112 (66%)
Frame = -2
Query: 645 IGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGI 466
I RF C E LF+P G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 465 ADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 310
A+++++E++ + P+TI ++ P R + ++G I+AS STF+ IS ++
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 93.1 bits (221), Expect = 2e-19
Identities = 50/139 (35%), Positives = 78/139 (56%), Gaps = 17/139 (12%)
Frame = -2
Query: 651 ITIGXERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMY 475
+ +G ERF PE F P F E + I +T+ I +C +D+R+ LY N V+SGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 474 PGIADRMQKEITALA----------------PSTIKIKIIAPPERKYSVWIGGSILASLS 343
A ++Q+++ L+ P I +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 342 TFQQMWISKEEYDESGPGI 286
F Q+ +K EY E GP I
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Frame = -2
Query: 651 ITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 472
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 471 GIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 301
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 300 SGPGI 286
G +
Sbjct: 379 RGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 76.2 bits (179), Expect = 2e-14
Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Frame = -2
Query: 651 ITIGXERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYP 472
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 471 GIADRMQKEITALAPSTIKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 301
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 300 SGPGI 286
G +
Sbjct: 379 RGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = -2
Query: 561 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 397
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 396 PERK----YSVWIGGSILASL-STFQQMWISKEEY 307
E K + W+G S+L SL T ++ ++ EE+
Sbjct: 254 SEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -1
Query: 574 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 431
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 475 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 377
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = -1
Query: 550 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMD 371
HH H G H H HH P + E H P H + H +P +
Sbjct: 432 HHHAPAHH--GHHESHGHG---HHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGE 486
Query: 370 RWIHPG 353
H G
Sbjct: 487 HGTHHG 492
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,294,918
Number of Sequences: 27780
Number of extensions: 257244
Number of successful extensions: 813
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -