Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_G19
         (745 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    26   0.37 
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    26   0.37 
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      25   0.48 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   7.9  

>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +3

Query: 33  IHKKFIAQSFFQXKKL--ISAFCLRPSGAIKIK 125
           I KKFI ++    K +  +S   LRP G+IK+K
Sbjct: 452 ILKKFILEAVDTRKDMAFVSDLVLRPKGSIKVK 484


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +3

Query: 33  IHKKFIAQSFFQXKKL--ISAFCLRPSGAIKIK 125
           I KKFI ++    K +  +S   LRP G+IK+K
Sbjct: 452 ILKKFILEAVDTRKDMAFVSDLVLRPKGSIKVK 484


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = +3

Query: 177 SQW---WSFSPLRSKQRAYSRGMRAP 245
           SQW   W+F+P+R   + +  G+R P
Sbjct: 254 SQWLAHWAFAPIRWVAKLWDSGLRKP 279


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 712 NRQRXHDVPEGAVPV 668
           N+Q   ++P GA+PV
Sbjct: 233 NKQHNFNLPPGAIPV 247


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 316 SFMHYGRHEYILLCD 360
           S++  GR+E ILLC+
Sbjct: 251 SYVDGGRNEIILLCE 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,462
Number of Sequences: 336
Number of extensions: 3097
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)