Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_G19
(745 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0012 - 7346282-7347136,7347234-7347593 46 2e-05
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 46 2e-05
11_01_0750 - 6315126-6315896,6316371-6316784 44 1e-04
11_02_0011 - 7337618-7338496,7338596-7338991 43 3e-04
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 43 3e-04
11_01_0771 + 6453130-6454488 42 7e-04
01_06_0824 - 32243495-32244319,32244449-32244859 33 0.24
05_06_0044 - 25150322-25151260 33 0.32
01_01_1152 + 9170628-9171899 33 0.32
03_05_0001 - 19386264-19386284,19386446-19386517,19386614-193873... 31 0.73
11_03_0145 + 10738910-10738934,10739257-10739603,10739626-10740210 29 3.9
07_01_0801 - 6278119-6278304,6278382-6278474,6278576-6278636,627... 29 5.2
08_01_1064 + 10841095-10842326,10842412-10842663,10842942-108430... 28 6.8
11_01_0767 + 6438648-6438809,6439146-6440000 28 9.0
08_02_0236 + 14652034-14652225,14652311-14652527,14652561-146532... 28 9.0
07_03_0316 + 16684100-16684339,16684425-16685132,16685241-166859... 28 9.0
05_03_0470 + 14448243-14448482,14448568-14449181,14449508-144501... 28 9.0
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 46.4 bits (105), Expect = 2e-05
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Frame = -2
Query: 624 YGTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKD--VDDFGLEDVDVKLPRF 451
YG + SM + LP R + + A + +D ++ D+++PRF
Sbjct: 236 YGENVGLSMYIFLPDARDGLPALVDKMAVASSGTASSSFLRDHRPGRRRIKVGDLRVPRF 295
Query: 450 QISTNVVLNKPLNDMGV---YDIFQPDLANFQRITKENIFVSAIVHKADIEXXXXXXXXX 280
++S +N+ L MG+ +D+ + DL+ I E + V ++H+A +E
Sbjct: 296 KVSFYSEMNEVLKGMGIGAAFDVGKVDLSGM--IDGELVVVEKVMHRAVVEVNEEGTEAA 353
Query: 279 XXXXXXXTD---RISAPA-FHANRPFVYFVMEKTTTTVIFSGIYSKPT 148
+++P F A+ PF +FV+E+ + V+F+G PT
Sbjct: 354 AATACTMKFLCLTLTSPVDFVADHPFAFFVVEEKSDAVLFAGHVLDPT 401
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 46.4 bits (105), Expect = 2e-05
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
Frame = -2
Query: 639 VLELPYGTDG---KYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVD 469
VL+LPY G ++SM ++LP + + + + +N + F L+K + +
Sbjct: 299 VLKLPYQQGGDKRQFSMYILLPEAQDGLWSLAEK---LNSEPEF--LEKHIPTRQVTVGQ 353
Query: 468 VKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITK---ENIFVSAIVHKADIEXXX 298
KLP+F+IS + L +G++ F + + + +N+FVS++ HK+ +E
Sbjct: 354 FKLPKFKISFGFEASDLLKSLGLHLPFSSEADLTEMVDSPEGKNLFVSSVFHKSFVEVNE 413
Query: 297 XXXXXXXXXXXXXTDRISAPA---FHANRPFVYFVMEKTTTTVIFSG 166
T R SAP F A+ PF++ + E T V+F G
Sbjct: 414 EGTEAAAATAAVITLR-SAPIAEDFVADHPFLFLIQEDMTGVVLFVG 459
Score = 42.3 bits (95), Expect = 4e-04
Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 7/189 (3%)
Frame = -2
Query: 696 MMYQKGQFPFSNLKKLKAFVLELPY---GTDGKYSMLVILPHPRTKIADMYKNFADVNLK 526
M +K Q+ S+ LK VL+LPY G ++SM ++LP + + + + +N +
Sbjct: 535 MSTRKKQY-LSSYDSLK--VLKLPYLQGGDKRQFSMYILLPEAQDGLWSLAEK---LNSE 588
Query: 525 DVFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITK-- 352
F ++ + + KLP+F+IS + L +G+ +F ++ + +
Sbjct: 589 PEF--MENHIPMRPVHVGQFKLPKFKISFGFGASGLLKGLGLPLLFGSEVDLIEMVDSPG 646
Query: 351 -ENIFVSAIVHKADIE-XXXXXXXXXXXXXXXXTDRISAPAFHANRPFVYFVMEKTTTTV 178
+N+FVS++ HK+ IE R F A+ PF++ + E T +
Sbjct: 647 AQNLFVSSVFHKSFIEVNEEGTEATAAVMVSMEHSRPRRLNFVADHPFMFLIREDVTGVI 706
Query: 177 IFSGIYSKP 151
+F G P
Sbjct: 707 LFIGHVVNP 715
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 44.4 bits (100), Expect = 1e-04
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
Frame = -2
Query: 639 VLELPYG---TDGKYSMLVILPHPRTKIADM-YKNFADVNLKDVFKQLQKDVDDFGLEDV 472
V++LPY + K+SM + LP + ++ K F++ + +K V
Sbjct: 228 VIKLPYKQGKNERKFSMYIFLPDDHDGLFELTQKIFSEPMFLEQHLPTEKC-------HV 280
Query: 471 DVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKEN-----IFVSAIVHKADIE 307
+ +P F+IS + + L DMG+ F + A F + KE+ +F+S ++HKA +E
Sbjct: 281 GISVPNFKISFQIDVKDFLKDMGLELPFLRE-AEFSDMIKEDDSSGPLFLSDVLHKAVLE 339
Query: 306 XXXXXXXXXXXXXXXXTDRISAPAFHANRPFVYFVMEKTTTTVIFSGIYSKPT 148
+ A F A+ PF + + E+ + TVIF G P+
Sbjct: 340 VDQKGIEETSVSMGLGKP-LPAQHFKADHPFFFMIREEVSGTVIFMGHVLDPS 391
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 42.7 bits (96), Expect = 3e-04
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 8/172 (4%)
Frame = -2
Query: 639 VLELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKL 460
+LE G + SM + LP R + + A + F L+ E D+++
Sbjct: 251 ILEHYGGENVGLSMYIFLPDERDGLPALVDKMAASSSSSSF--LRDHRPTRRREVGDLRV 308
Query: 459 PRFQISTNVVLNKPLNDMGV---YDIFQPDLANFQRITKEN---IFVSAIVHKADIEXXX 298
PRF++S +N L MGV +D + DL+ + + V + H+A +E
Sbjct: 309 PRFKVSFYSQINGVLQGMGVTAAFDAGEADLSGMAEGVDQRGGGLVVEEVFHRAVVEVNE 368
Query: 297 XXXXXXXXXXXXXTD-RISAPA-FHANRPFVYFVMEKTTTTVIFSGIYSKPT 148
+S P F A+ PF +FV+E+T+ V+F+G PT
Sbjct: 369 EGTEAAASTACTIRLLSMSYPEDFVADHPFAFFVVEETSGAVLFAGHVLDPT 420
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 42.7 bits (96), Expect = 3e-04
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 9/191 (4%)
Frame = -2
Query: 696 MMYQKGQFPFSNLKKLKAFVLELPY--GTD-GKYSMLVILPHPRTKIADMYKNFADVNLK 526
M K Q+ S+ LK VL+LPY G D ++SM ++LP + ++ A +N +
Sbjct: 75 MSTSKKQY-LSSYDSLK--VLKLPYQKGRDLRQFSMYILLPEAQD---GLWSLAAKLNSE 128
Query: 525 DVFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMGVYDIF--QPDLANFQRIT- 355
F L+K + + KLP+F+IS + L +G+ F + DL
Sbjct: 129 PEF--LEKRIPTRQVTVGKFKLPKFKISFGFEASDLLKILGLQLPFSSKADLTGMVGSPE 186
Query: 354 KENIFVSAIVHKADIEXXXXXXXXXXXXXXXXTDRISAPA---FHANRPFVYFVMEKTTT 184
+ N+FVS++ HK+ ++ + R SAP F A+ PF++ + E T
Sbjct: 187 RHNLFVSSLFHKSFVQVDEEGTEAAAASAAVVSFR-SAPVTVDFVADHPFLFLIREDMTG 245
Query: 183 TVIFSGIYSKP 151
V+F G P
Sbjct: 246 VVLFIGHVVNP 256
>11_01_0771 + 6453130-6454488
Length = 452
Score = 41.5 bits (93), Expect = 7e-04
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Frame = -2
Query: 471 DVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKEN-----IFVSAIVHKADIE 307
+ ++P+F++S + L +G+ F P+LA+ + +++ +FV I HKA IE
Sbjct: 335 EFRVPKFKVSCGGSVVGALEQLGLRLPFSPELADLSDMVEDDGSGWPLFVGDIQHKAVIE 394
Query: 306 XXXXXXXXXXXXXXXXTDRISAPA---FHANRPFVYFVMEKTTTTVIFSGIYSKPT 148
P F A PF YF++E+ ++ V+F+G P+
Sbjct: 395 VNEEGTVAAAATMTRMLPSGVPPPPVDFVAEHPFAYFIVEEMSSAVVFAGHIVDPS 450
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 33.1 bits (72), Expect = 0.24
Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 22/186 (11%)
Frame = -2
Query: 639 VLELPYGTDGK---------YSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDF 487
VL LPY G+ +SM + LP R + DM + D ++
Sbjct: 227 VLRLPYARGGRGRGRDTGRLFSMYIYLPDERHGLPDMLRKLCS----DPAALIESSAALT 282
Query: 486 GLEDVDV-KLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITK-----ENIFVSAIV 325
V +PRF +S + L +G+ F+ A+ + + E I VSA+
Sbjct: 283 EKVPVGAFMVPRFTLSYKTNAAETLRQLGLRLPFEYPGADLSEMVESSPEAEKIVVSAVY 342
Query: 324 HKADIEXXXXXXXXXXXXXXXXTDRISAPA-------FHANRPFVYFVMEKTTTTVIFSG 166
H++ +E T +AP+ F A+ PF++ + E T V+F+G
Sbjct: 343 HESFVEVNEEGTEAAAATAVVMTLGCAAPSAPVHVVDFVADHPFMFLIKEDLTGVVVFAG 402
Query: 165 IYSKPT 148
+ P+
Sbjct: 403 QVTNPS 408
>05_06_0044 - 25150322-25151260
Length = 312
Score = 32.7 bits (71), Expect = 0.32
Identities = 33/165 (20%), Positives = 69/165 (41%), Gaps = 8/165 (4%)
Frame = -2
Query: 621 GTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKLPRFQIS 442
G D ++M + LP R + ++ + A N ++ + ++ K+P+F++S
Sbjct: 148 GGDKMFAMYIYLPDDRDGLPELARKLAS-NPAAFLRRTIVPAQPVAVGEL--KIPKFEVS 204
Query: 441 TNVVLNKPLNDMGVYDIFQPDLAN-FQRIT---KENIFVSAIVHKADI----EXXXXXXX 286
V ++ L + G+ F P N F + + VS+++H+ + E
Sbjct: 205 LKVEASRLLREFGLDLPFLPAADNSFSGMLLDPPQGTAVSSLLHQCFVNVNEEGTVAAAG 264
Query: 285 XXXXXXXXXTDRISAPAFHANRPFVYFVMEKTTTTVIFSGIYSKP 151
F A+ PF++F++E+ + V+F+G P
Sbjct: 265 TVGEIMGFAMPDDQIVDFVADHPFLFFIVEEVSGLVVFAGQVVNP 309
>01_01_1152 + 9170628-9171899
Length = 423
Score = 32.7 bits (71), Expect = 0.32
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = -2
Query: 462 LPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKENIFVSAIVHKADIEXXXXXXXX 283
+P+F+ S + +GV F + + +F++ + H+A IE
Sbjct: 314 VPKFKFSFKFEAKSDMRKLGVTRAFAGGDFSGMVTGGDGLFIAEVYHQATIEVDELGTVA 373
Query: 282 XXXXXXXXTDRISA--PA-FHANRPFVYFVMEKTTTTVIFSGIYSKP 151
+ S+ P F A+RPF++ V+E+ T V+F G P
Sbjct: 374 AASTAVVMMQKGSSLPPVDFVADRPFLFAVVEELTGAVLFLGHVVNP 420
>03_05_0001 -
19386264-19386284,19386446-19386517,19386614-19387357,
19387454-19388884,19388953-19389118,19392035-19392114,
19392393-19392462,19392550-19392761,19392837-19392890,
19393471-19393623,19393715-19393930,19394029-19394248,
19394332-19394399,19394510-19394643,19394755-19394854,
19394943-19395421,19395506-19395699,19396270-19396355,
19396364-19396444,19396842-19397023,19397305-19397346,
19398247-19398558,19399374-19399434,19399435-19399617,
19399744-19399863,19400380-19401051,19402597-19402668,
19402742-19402865,19403563-19403651,19405023-19405097
Length = 2170
Score = 31.5 bits (68), Expect = 0.73
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 552 CTCLRSSFSGAGV*PASSTFRRCRKEVP 635
C CL S SG G+ PA +F CR + P
Sbjct: 536 CPCLPESSSGCGILPAPPSFNPCRCDKP 563
>11_03_0145 + 10738910-10738934,10739257-10739603,10739626-10740210
Length = 318
Score = 29.1 bits (62), Expect = 3.9
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = -2
Query: 675 FPFSNLKKLKAFVLELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDV 496
+PF +LK+ L +P G G+ T IA + F D + D + ++Q V
Sbjct: 22 YPFDDLKENTPCKLHVPIGRSGR------TLEATTAIAIPGRTFNDEFIPDEYAKVQLQV 75
Query: 495 DDFGLEDVDVKLP 457
G E D+ +P
Sbjct: 76 FHEGFESYDIDIP 88
>07_01_0801 -
6278119-6278304,6278382-6278474,6278576-6278636,
6278724-6278834,6278915-6279166,6279250-6280367
Length = 606
Score = 28.7 bits (61), Expect = 5.2
Identities = 20/73 (27%), Positives = 32/73 (43%)
Frame = -2
Query: 675 FPFSNLKKLKAFVLELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDV 496
+PF +LK+ L++P G GK T IA + + + L D + ++Q V
Sbjct: 15 YPFDDLKENTPCRLDVPIGRSGK------TLEAATAIAIPGRTYNEQFLPDAYAKVQPQV 68
Query: 495 DDFGLEDVDVKLP 457
G E D+ P
Sbjct: 69 VHEGFESYDIDYP 81
>08_01_1064 +
10841095-10842326,10842412-10842663,10842942-10843020,
10843274-10843459
Length = 582
Score = 28.3 bits (60), Expect = 6.8
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = -2
Query: 678 QFPFSNLKKLKAFVLELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKD 499
++PF +LK+ L +P G GK T IA + + + + D + ++Q
Sbjct: 55 EYPFDDLKENTPCRLHVPIGRSGK------TLEAATTIAIPGRTYNEEFIPDAYAKVQPQ 108
Query: 498 VDDFGLEDVDVKLP 457
V G E D+ P
Sbjct: 109 VVHEGFESYDIDFP 122
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 27.9 bits (59), Expect = 9.0
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -2
Query: 234 FHANRPFVYFVMEKTTTTVIFSGIYSKPT 148
F A+ PF +F++E+ + ++F+G P+
Sbjct: 307 FVADHPFAFFIVEERSQAIVFAGHVLDPS 335
>08_02_0236 +
14652034-14652225,14652311-14652527,14652561-14653208,
14653374-14654364,14654532-14654703
Length = 739
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = -2
Query: 675 FPFSNLKKLKAFVLELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDV 496
+PF +LK+ L +P G GK T IA + + + + D + ++Q V
Sbjct: 358 YPFDDLKENTPCRLHVPIGRSGK------TLEAATAIAIPRRTYNEEFIPDAYAKVQPQV 411
Query: 495 DDFGLEDVDVKLP 457
G E D+ P
Sbjct: 412 VHEGFESYDIDFP 424
>07_03_0316 +
16684100-16684339,16684425-16685132,16685241-16685939,
16685992-16686053,16686096-16686368,16686622-16686873,
16686954-16687064,16687152-16687212,16687312-16687404,
16687482-16687667
Length = 894
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/73 (26%), Positives = 32/73 (43%)
Frame = -2
Query: 675 FPFSNLKKLKAFVLELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDV 496
+PF +LK+ L +P G GK T IA + + + + + D + ++Q V
Sbjct: 404 YPFDDLKENTPCRLHVPIGRFGK------TLEAATAIAILGRTYNEEFIPDAYAKVQPQV 457
Query: 495 DDFGLEDVDVKLP 457
G E D+ P
Sbjct: 458 VHEGFESYDIDFP 470
>05_03_0470 +
14448243-14448482,14448568-14449181,14449508-14450135,
14450217-14450827,14450911-14451162,14451243-14451353,
14451441-14451501,14451603-14451695,14451773-14451940
Length = 925
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = -2
Query: 675 FPFSNLKKLKAFVLELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKDVFKQLQKDV 496
+PF NLK+ L +P G GK T IA + + + + V+ ++Q V
Sbjct: 376 YPFDNLKENTPCRLHVPIGRSGK------TLEAATAIAIPGRTYNEEFIPAVYAKVQPQV 429
Query: 495 DDFGLEDVDVKLP 457
G E D+ P
Sbjct: 430 VHEGFESYDIDFP 442
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,476,375
Number of Sequences: 37544
Number of extensions: 339676
Number of successful extensions: 880
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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