Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_G19
         (745 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_55238| Best HMM Match : Serpin (HMM E-Value=0)                      84   1e-16
SB_38975| Best HMM Match : Serpin (HMM E-Value=0)                      82   5e-16
SB_55237| Best HMM Match : Serpin (HMM E-Value=0)                      76   3e-14
SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.99 
SB_49709| Best HMM Match : UPAR_LY6 (HMM E-Value=1.8)                  29   4.0  
SB_22586| Best HMM Match : DUF287 (HMM E-Value=9.7)                    28   7.0  

>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 345

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 6/190 (3%)
 Frame = -2

Query: 702 VXMMYQKGQFPFSNLKKLKAFVLELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKD 523
           V MM+QK +F + +  K K  +LELPY  D + SM+++LP     +A   ++     + D
Sbjct: 159 VEMMFQKSKFKYLHSDKYKCKLLELPY-VDTQLSMVLVLPDETEGLARFEQDLTHDKMTD 217

Query: 522 VFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRIT--KE 349
           +F  +          DV+V +P+F++++   LN+ L ++G+  +F    A+F  I+   E
Sbjct: 218 IFNSVSSQRP----ADVEVYIPKFKMTSEFKLNEALQELGMKKMFDQAAADFTGISLPPE 273

Query: 348 NIFVSAIVHKADIEXXXXXXXXXXXXXXXXTDRISAP----AFHANRPFVYFVMEKTTTT 181
           ++FVSA++HKA +E                  R +       F A+ PF++ +    +  
Sbjct: 274 HLFVSAVLHKAFVEVNEEGTEAAAATAAIMMMRCAIMREPLVFRADHPFLFLIQHCKSKC 333

Query: 180 VIFSGIYSKP 151
           V+F G    P
Sbjct: 334 VLFMGRVMNP 343


>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 380

 Score = 81.8 bits (193), Expect = 5e-16
 Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 2/181 (1%)
 Frame = -2

Query: 702 VXMMYQKGQFPFSNLKKLKAFVLELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKD 523
           V  MYQ  +F +     L   ++ELPY  + K SM+V+LP+   ++  + K  + +N K+
Sbjct: 196 VQFMYQSSEFRYLESSTLGCQIVELPYAGE-KLSMVVLLPN---EVDGLGKLESSLN-KE 250

Query: 522 VFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRITKENI 343
             ++    + +   E+V+V LP+F ++    L + L  MG  D+F P  A+   I+   +
Sbjct: 251 TLQEAMTSLRNSHPEEVEVTLPKFTLTQEFSLGETLKGMGASDLFSPGKADLSGISAAPL 310

Query: 342 FVSAIVHKA--DIEXXXXXXXXXXXXXXXXTDRISAPAFHANRPFVYFVMEKTTTTVIFS 169
            VS +VHKA  ++                       P F+AN PF++ +    T  V+F 
Sbjct: 311 VVSEVVHKAFVEVNEEGTIAAAATGVGIMLMSMPMNPVFYANHPFLFLIRHNDTGAVLFM 370

Query: 168 G 166
           G
Sbjct: 371 G 371


>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
          Length = 363

 Score = 76.2 bits (179), Expect = 3e-14
 Identities = 53/188 (28%), Positives = 93/188 (49%), Gaps = 3/188 (1%)
 Frame = -2

Query: 702 VXMMYQKGQFPFSNLKKLKAFVLELPYGTDGKYSMLVILPHPRTKIADMYKNFADVNLKD 523
           V MM +K +  F     +K  V+ELPY  D   +M++ILP   + I  + K+  DV + +
Sbjct: 166 VEMMTRKMKVNFYYDADIKCRVVELPYSGDDT-AMVIILPEEPSGIFSLEKSI-DVEIME 223

Query: 522 VFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMGVYDIFQPDLANFQRIT-KEN 346
            +++L  +        V+V +P+F++S  + L   L D+GV DIF    A+   I+  + 
Sbjct: 224 KWRRLMINTT------VEVSIPKFRLSQKLELRSLLQDLGVSDIFDSRKADLSGISAAKG 277

Query: 345 IFVSAIVHKADIEXXXXXXXXXXXXXXXXTDRI--SAPAFHANRPFVYFVMEKTTTTVIF 172
           ++VS+ +HKA IE                  R       F+A+ PF++ +  K ++ ++F
Sbjct: 278 LYVSSAIHKAHIEVNERGTVAAATTGVVMAKRSLDMNEVFYADHPFLFSIHHKPSSAILF 337

Query: 171 SGIYSKPT 148
            G   +PT
Sbjct: 338 LGKVMQPT 345


>SB_53949| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1149

 Score = 31.1 bits (67), Expect = 0.99
 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
 Frame = -2

Query: 531 LKDVFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPL---NDMGVYDIFQPDLANFQR 361
           +KD +  +++   D G+ +   K       TN+   +PL   N+MG  + F P L NFQ 
Sbjct: 113 IKDAYDDIRRHQSDRGVNNRKSKALIGNSETNLKCRQPLPDTNEMGDDEAFLPSLKNFQV 172

Query: 360 ITK-ENIFVSAIV 325
             +  N +++ +V
Sbjct: 173 FLQWPNFYMNNVV 185


>SB_49709| Best HMM Match : UPAR_LY6 (HMM E-Value=1.8)
          Length = 437

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
 Frame = +2

Query: 230 WNAGAEILSVRVATVDAEATVPDSVTSISALCTMA--DTN 343
           WN  AEI S  VAT +A  T   + TS    C  A  DTN
Sbjct: 295 WNNCAEIFSNLVATPEAPCTDQHTTTSFPTACRHATDDTN 334


>SB_22586| Best HMM Match : DUF287 (HMM E-Value=9.7)
          Length = 175

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -2

Query: 561 DMYKNFADVNLKDVFKQLQKDVDDFGLEDVDVKLPRFQISTNVVLNKPLNDMG 403
           D+ K  AD  + D++      VDD+G    + K P   +++ V    PL+ MG
Sbjct: 127 DLMKRIADSYISDLY------VDDYGRLRTNKKFPDITLNSQVFTFSPLSPMG 173


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,325,622
Number of Sequences: 59808
Number of extensions: 395241
Number of successful extensions: 1035
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2010148439
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)