Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_G19
(745 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 3.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 3.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 3.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 3.0
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 4.0
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 4.0
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 4.0
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 4.0
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 4.0
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 4.0
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 4.0
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 4.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 4.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 4.0
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 512 CLKTSLRLTSAKFLYMSAIFVLGCGSMTS 598
CLK L T + Y + +F+ G +TS
Sbjct: 289 CLKVDLIFTRDRAFYFTTVFIPGIILVTS 317
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 512 CLKTSLRLTSAKFLYMSAIFVLGCGSMTS 598
CLK L T + Y + +F+ G +TS
Sbjct: 258 CLKVDLIFTRDRAFYFTTVFIPGIILVTS 286
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 512 CLKTSLRLTSAKFLYMSAIFVLGCGSMTS 598
CLK L T + Y + +F+ G +TS
Sbjct: 309 CLKVDLIFTRDRAFYFTTVFIPGIILVTS 337
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 512 CLKTSLRLTSAKFLYMSAIFVLGCGSMTS 598
CLK L T + Y + +F+ G +TS
Sbjct: 258 CLKVDLIFTRDRAFYFTTVFIPGIILVTS 286
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 611 ESTRCWSYSRTRERRSQ 561
E T C YSR+RER +
Sbjct: 32 ERTSCKRYSRSREREQK 48
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 611 ESTRCWSYSRTRERRSQ 561
E T C YSR+RER +
Sbjct: 32 ERTSCKRYSRSREREQK 48
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 611 ESTRCWSYSRTRERRSQ 561
E T C YSR+RER +
Sbjct: 32 ERTSCKRYSRSREREQK 48
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 611 ESTRCWSYSRTRERRSQ 561
E T C YSR+RER +
Sbjct: 32 ERTSCKRYSRSREREQK 48
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 611 ESTRCWSYSRTRERRSQ 561
E T C YSR+RER +
Sbjct: 265 ERTSCKRYSRSREREQK 281
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 611 ESTRCWSYSRTRERRSQ 561
E T C YSR+RER +
Sbjct: 265 ERTSCKRYSRSREREQK 281
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 611 ESTRCWSYSRTRERRSQ 561
E T C YSR+RER +
Sbjct: 265 ERTSCKRYSRSREREQK 281
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 611 ESTRCWSYSRTRERRSQ 561
E T C YSR+RER +
Sbjct: 265 ERTSCKRYSRSREREQK 281
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 611 ESTRCWSYSRTRERRSQ 561
E T C YSR+RER +
Sbjct: 265 ERTSCKRYSRSREREQK 281
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3
Query: 611 ESTRCWSYSRTRERRSQ 561
E T C YSR+RER +
Sbjct: 254 ERTSCKRYSRSREREQK 270
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,460
Number of Sequences: 438
Number of extensions: 3930
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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