Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_G16
         (612 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    24   1.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    24   1.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   2.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.5  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   4.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.7  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   4.7  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 246 ILFQHYYLYYL 214
           +LFQ YYLYY+
Sbjct: 266 VLFQAYYLYYV 276


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 246 ILFQHYYLYYL 214
           +LFQ YYLYY+
Sbjct: 266 VLFQAYYLYYV 276


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -1

Query: 246 ILFQHYYLYYLVICVWNYSNRFSSL 172
           + FQ YY Y+L + V  +  ++ ++
Sbjct: 152 LYFQFYYTYFLCVIVCIFRGKYRNI 176


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/30 (26%), Positives = 12/30 (40%)
 Frame = +3

Query: 72  CPSDAWDSHILPSCNSNDVISSSNDGKAMH 161
           CP D +DS I+      +V+         H
Sbjct: 108 CPGDLYDSDIIQDIVPQNVLDEEEKSSTKH 137


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 192 NNSRRKSLGNTDNSVERVFTHSL 260
           NN +RKS G  D   E +   SL
Sbjct: 329 NNDKRKSRGEVDGLGENMMDMSL 351


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 153 AMHILSRDLRTGW 191
           A+H++S DLR  W
Sbjct: 208 AIHVMSYDLRGNW 220


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 192 NNSRRKSLGNTDNSVERVFTHSL 260
           NN +RKS G  D   E +   SL
Sbjct: 329 NNDKRKSRGEVDGLGENMMDMSL 351


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,479
Number of Sequences: 336
Number of extensions: 3415
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)