Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_G16
(612 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical pr... 71 9e-13
Z75543-1|CAA99867.1| 314|Caenorhabditis elegans Hypothetical pr... 30 1.5
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 29 3.5
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF039046-12|AAB94215.1| 299|Caenorhabditis elegans Hydroxy-acyl... 29 3.5
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 4.6
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 4.6
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 4.6
Z82051-6|CAB04821.1| 354|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z81097-2|CAB03166.1| 295|Caenorhabditis elegans Hypothetical pr... 28 6.0
U00048-7|AAB53831.2| 752|Caenorhabditis elegans Hypothetical pr... 28 6.0
AL031634-1|CAA21034.1| 256|Caenorhabditis elegans Hypothetical ... 28 6.0
Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z74037-2|CAD36492.1| 441|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z74037-1|CAA98492.1| 510|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z77136-5|CAB00882.1| 1152|Caenorhabditis elegans Hypothetical protein
ZC376.6 protein.
Length = 1152
Score = 70.5 bits (165), Expect = 9e-13
Identities = 45/181 (24%), Positives = 91/181 (50%), Gaps = 4/181 (2%)
Frame = -3
Query: 607 QESXALQILLEAC--LETPDDQXKPELMWSLREVRSIICSFLHQIFISEPSLAKLVHFQG 434
Q S + L+E C DD L+ R++R I C ++H+ F+ L ++V Q
Sbjct: 941 QHSVLIHALIEVCDSKRMKDDPSDFSLLEKRRQIRRIACEYIHRTFLDYEGLIRVVLHQR 1000
Query: 433 YPRELLPVTVQGIPSMHICLDFIPELLSQASLEKQIFAVDLVSHLSIQYALPKAMSIARL 254
+P + V+GIP++ I E+L+ +++ FAV + + +Y + +++ AR+
Sbjct: 1001 FPLRQVRDLVEGIPALFAGNGLILEMLTLPEQQRRFFAVVFAAEICRKYRVRESLETARV 1060
Query: 253 CVNTLSTL--LSVLPSDLRLELFQPVLKSLERICIAFPSLLEDITSLLLQLGRICESQAS 80
+ + +L LPS + L++ V +L + + FPSL + I LL ++ +++ +
Sbjct: 1061 VCDIVHSLHKHGELPSSYK--LWKHVAPALMLLAVEFPSLADSINRLLTRVATAAKNRLA 1118
Query: 79 L 77
+
Sbjct: 1119 V 1119
>Z75543-1|CAA99867.1| 314|Caenorhabditis elegans Hypothetical
protein K01D12.1 protein.
Length = 314
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -3
Query: 190 QPVLKSLERICIAFPSLLEDITSLLLQLGRICESQASLGHCWNDTPILG 44
QPV + E +AFP E+IT + L +G +++ L W T G
Sbjct: 103 QPVANTDEVKYVAFPKRDENITMVTLGIGHDVDAEMRLKKLWPKTEFFG 151
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 306 DTRSTANICFSREAWLNSSGIKSKQMCIDGMPCTVTGKSS 425
D + NIC + + S S+ C +G+ C +GK S
Sbjct: 760 DYKQMHNICVKKNIGIEGSPCSSRDDCGEGLMCGASGKCS 799
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
protein F48E3.8b protein.
Length = 1299
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 306 DTRSTANICFSREAWLNSSGIKSKQMCIDGMPCTVTGKSS 425
D + NIC + + S S+ C +G+ C +GK S
Sbjct: 760 DYKQMHNICVKKNIGIEGSPCSSRDDCGEGLMCGASGKCS 799
>AF039046-12|AAB94215.1| 299|Caenorhabditis elegans
Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
Length = 299
Score = 28.7 bits (61), Expect = 3.5
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 4/103 (3%)
Frame = -3
Query: 301 LSIQYALPKAMSIARLCVNTLSTLLSVLPSDLRLELFQPVLKSLERICIAFPSLLEDITS 122
L I +P A A + + ++ L DL+L++FQ + K+ + C+ L+ + +S
Sbjct: 86 LQIHTDIPSAAEDAAMAIEAVAENL-----DLKLDIFQTIQKTCPQNCM----LITNTSS 136
Query: 121 L-LLQLGRICESQASLG--HCWNDTPILGETAYVDS-ERQPET 5
L L Q+ + ++ A H +N P++ V + E PET
Sbjct: 137 LKLSQMLPVIQNPALFAGLHFFNPVPVMKLVEVVSTDETSPET 179
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 45 PN-MGVSFQQCPSDAWDSHILPSCNSNDVISSSNDG 149
PN +G + C ++AWD H L C D +DG
Sbjct: 1155 PNTVGEMCENCTTNAWDYHPLNGCKLCDCSDIGSDG 1190
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 45 PN-MGVSFQQCPSDAWDSHILPSCNSNDVISSSNDG 149
PN +G + C ++AWD H L C D +DG
Sbjct: 1155 PNTVGEMCENCTTNAWDYHPLNGCKLCDCSDIGSDG 1190
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = +3
Query: 45 PN-MGVSFQQCPSDAWDSHILPSCNSNDVISSSNDG 149
PN +G + C ++AWD H L C D +DG
Sbjct: 1155 PNTVGEMCENCTTNAWDYHPLNGCKLCDCSDIGSDG 1190
>Z82051-6|CAB04821.1| 354|Caenorhabditis elegans Hypothetical
protein T23D5.9 protein.
Length = 354
Score = 27.9 bits (59), Expect = 6.0
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 246 ILFQHYYLYYLVICVWNYSNRFSSLWK-GYASPFHHY*KILHHYYCSLAG 100
+L+ +Y+ L I ++ R+S+L+K A F Y I+ YC G
Sbjct: 94 LLYASFYIVILAIIAVQFAFRYSTLYKPNIAKNFGGYGVIVWMLYCIFCG 143
>Z81097-2|CAB03166.1| 295|Caenorhabditis elegans Hypothetical
protein K07A1.4 protein.
Length = 295
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +3
Query: 114 NSNDVISSSNDGKAMHILSRDLRTGWNNS 200
N ND I+S GKA LSR GW S
Sbjct: 201 NGNDAITSQKIGKAHPGLSRFTMEGWQRS 229
>U00048-7|AAB53831.2| 752|Caenorhabditis elegans Hypothetical
protein C05D11.9 protein.
Length = 752
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 117 SNDVISSSNDGKAMHILSRDLRTGWN 194
S+ V SS DG+ +++L D RT W+
Sbjct: 300 SDSVFQSSRDGEVINLLIEDPRTTWD 325
>AL031634-1|CAA21034.1| 256|Caenorhabditis elegans Hypothetical
protein Y32B12C.1 protein.
Length = 256
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/57 (21%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = -3
Query: 481 IFISEPSLAKLVHFQGYPRELLPVTVQGIPSM-HICLDFIPELLSQASLEKQIFAVD 314
++++E + ++ ++ E L + +P++ H C + +P+L+ + LEK+ + V+
Sbjct: 15 LWMTEEGVEQMSSYRNTNWEALKTELGKLPTLRHSCKNHVPQLVKEFCLEKRRYGVN 71
>Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical
protein C10C6.6 protein.
Length = 1178
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = -3
Query: 328 IFAVDLVSHLSIQYALPKAMSIARLCVNTLSTLLSVLPSDLRLELFQPVLKSL 170
IFA+ ++L I+ ++ + S +L + L SV+P +L +EL V SL
Sbjct: 403 IFAIAAAAYLWIKGSVDETRSKYKLFLECTLILTSVIPPELPIELSLAVNSSL 455
>Z74037-2|CAD36492.1| 441|Caenorhabditis elegans Hypothetical
protein F57B7.1b protein.
Length = 441
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 382 CALMECLVLLLVKVLGDNLENAQVLLK 462
CAL+ V LL+++L + EN Q LLK
Sbjct: 234 CALLSLFVWLLLRILREVRENRQRLLK 260
>Z74037-1|CAA98492.1| 510|Caenorhabditis elegans Hypothetical
protein F57B7.1a protein.
Length = 510
Score = 27.5 bits (58), Expect = 8.0
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 382 CALMECLVLLLVKVLGDNLENAQVLLK 462
CAL+ V LL+++L + EN Q LLK
Sbjct: 234 CALLSLFVWLLLRILREVRENRQRLLK 260
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,152,253
Number of Sequences: 27780
Number of extensions: 307861
Number of successful extensions: 767
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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