Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_G16
         (612 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   5.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.4  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   5.4  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              21   7.2  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   9.5  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 120 YYCSLAGYANPKRHWD 73
           Y  S+AGY + +RH D
Sbjct: 21  YVVSVAGYKHSRRHRD 36


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 147 HHY*KILHHYYCSLAGYANP 88
           H Y ++ +H   S AGY NP
Sbjct: 181 HDY-RVWNHQLISYAGYKNP 199


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = -3

Query: 574 ACLETPDDQXKPELMWSLREVRSIICSFLHQIFI 473
           AC + P++  +PE  W++  +       L  +F+
Sbjct: 641 ACRDIPEEFLRPESGWAIGAMSFSATGILITLFV 674


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 275 SNVNSQTMCEYSFNTIICI 219
           SNV+S   CE SF  + C+
Sbjct: 114 SNVDSSDKCEKSFMFMKCM 132


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 13/56 (23%), Positives = 24/56 (42%)
 Frame = -3

Query: 448 VHFQGYPRELLPVTVQGIPSMHICLDFIPELLSQASLEKQIFAVDLVSHLSIQYAL 281
           VHF  Y   ++   V G+  +  CL     +L   ++++   AV    ++   Y L
Sbjct: 194 VHFHDYTGSVVIHVVGGLTGLIGCLTLGRRILRLDAIDEASIAVGASGNVFAGYLL 249


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,355
Number of Sequences: 438
Number of extensions: 3569
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)