Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_G15
(862 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0848 - 25334701-25334949,25335076-25335184,25335667-253357... 129 3e-30
04_04_0703 + 27398358-27398466,27398549-27398859,27399044-273991... 124 7e-29
02_02_0139 + 7122880-7122979,7123328-7123560,7123961-7124032,712... 85 5e-17
04_04_1653 + 35070026-35070064,35070358-35070408,35070490-350705... 41 0.001
02_05_1142 - 34391144-34391590,34391715-34391904,34392058-343921... 39 0.004
01_01_0406 + 3059996-3060047,3060804-3060867,3060979-3061054,306... 38 0.008
06_01_0296 - 2156895-2157160,2157435-2157527,2157932-2158031,215... 36 0.031
05_02_0108 + 6681656-6681944,6682041-6682183,6682548-6682610 34 0.17
05_01_0458 + 3630218-3630274,3630383-3630507,3630635-3630710,363... 33 0.29
02_05_1236 + 35141404-35142731,35142753-35143089,35143228-351433... 33 0.29
09_06_0215 - 21621889-21621949,21622275-21622333,21622442-216225... 31 0.89
06_02_0265 - 13586552-13587985 31 1.6
01_06_1839 - 40245862-40246022,40246872-40246977,40247868-402479... 31 1.6
04_03_0797 + 19744815-19745030,19745190-19745273,19745375-197454... 30 2.1
11_01_0467 + 3621266-3621401,3621531-3622699,3622815-3623128,362... 30 2.7
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 30 2.7
07_03_0987 - 23155134-23155693,23155781-23157023 29 3.6
12_01_1112 - 11866376-11866447,11866528-11866662,11866772-118669... 29 6.3
06_01_0206 - 1573796-1574071,1574580-1574678,1574859-1574951,157... 29 6.3
04_03_0933 + 20906482-20906660,20907770-20907832,20910028-209101... 29 6.3
03_06_0517 + 34466743-34466879,34468478-34468588,34468997-344690... 29 6.3
10_08_0373 - 17286104-17288839 28 8.3
07_01_0985 - 8297560-8297610,8297728-8297939,8298327-8298449,829... 28 8.3
03_05_0583 - 25838016-25838684 28 8.3
02_04_0300 + 21784634-21784691,21784784-21784893,21787486-217877... 28 8.3
>06_03_0848 -
25334701-25334949,25335076-25335184,25335667-25335701,
25335793-25335843,25335941-25336018,25336214-25336351,
25336664-25336729,25337387-25337572
Length = 303
Score = 129 bits (311), Expect = 3e-30
Identities = 66/181 (36%), Positives = 100/181 (55%), Gaps = 5/181 (2%)
Frame = -1
Query: 853 RCIWFKVNIKHADWVPILAQAGFDFHHSRDSFVMMYKWLPTNSKANLPPACHTNLGVGGM 674
R +W K+ I A+ + + GF +HH+ ++++M+ WLP + LP +GVG
Sbjct: 65 RGVWIKLPISLANLIQYAVEEGFWYHHAEETYLMLAYWLPATTHT-LPVNATHRVGVGAF 123
Query: 673 VFNSQNQILVVVEQH---TDIVHWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVT 503
V N + ++L V E+ + WK P G VE GEDI +REV EETGI+ F ++
Sbjct: 124 VMNDKREVLAVQEKSGVLRGLGVWKFPTGVVEPGEDINLGAVREVKEETGIDTEFVEVLA 183
Query: 502 LRHSHNSMFGNSDIYIVVMLKAISDTINKSEIEIAACQWMDVDEYLNHPNV--HEFNRSI 329
R SH + F SD++ V +L+ +S I K + EI A QWM V+E+ P V HE + I
Sbjct: 184 FRQSHKAFFDKSDLFFVCILRPLSFDITKQDSEIEAAQWMPVEEFAAQPFVQKHELVKYI 243
Query: 328 V 326
+
Sbjct: 244 L 244
>04_04_0703 +
27398358-27398466,27398549-27398859,27399044-27399109,
27399196-27399258,27399304-27399444,27399535-27399612,
27399688-27399738,27399829-27399863,27399982-27400090,
27400235-27400441
Length = 389
Score = 124 bits (300), Expect = 7e-29
Identities = 56/148 (37%), Positives = 85/148 (57%), Gaps = 3/148 (2%)
Frame = -1
Query: 790 GFDFHHSRDSFVMMYKWLPTNSKANLPPACHTNLGVGGMVFNSQNQILVVVEQHTDIV-- 617
GF +HH+ +++VM+ W+P LP +GVGG V N Q ++LVV E++
Sbjct: 185 GFKYHHAEEAYVMLTYWIPHEEPCMLPANASHQVGVGGFVINDQMEVLVVQEKYCGSSLD 244
Query: 616 -HWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLK 440
WKLP G++ E+I REV EETG++ F +V RH+HN F SD++ + ML+
Sbjct: 245 GAWKLPTGFILASEEIFTGATREVKEETGVDTEFVDVVAFRHAHNVAFQKSDLFFICMLR 304
Query: 439 AISDTINKSEIEIAACQWMDVDEYLNHP 356
S+ I E EI A +WM ++E++ P
Sbjct: 305 PTSNNIKIDETEIQAAKWMPLEEFVKQP 332
>02_02_0139 +
7122880-7122979,7123328-7123560,7123961-7124032,
7124257-7124334,7124529-7124579,7124654-7124703,
7124807-7124915,7125023-7125223
Length = 297
Score = 85.4 bits (202), Expect = 5e-17
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 9/130 (6%)
Frame = -1
Query: 718 NLPPACHTNLGVGGMVFNSQNQILVVVEQHTDIVH----WKLPGGYVERGEDIKDAVIRE 551
NL C T + +GG+ +S ++VV++ H WK+P G++++ ED+ IRE
Sbjct: 114 NLNFICFT-IFLGGLCLSSCRARVLVVKEGKCPSHCSDIWKIPTGFIDKFEDLFSGAIRE 172
Query: 550 VMEETG-----IEASFDSIVTLRHSHNSMFGNSDIYIVVMLKAISDTINKSEIEIAACQW 386
V EETG IE+ F +V RH+H +F SDI + LK +S I+ E EI A +W
Sbjct: 173 VREETGNSTFQIESCFLDVVAFRHAHQVLFDKSDILFICTLKPLSSDISIDESEIEAARW 232
Query: 385 MDVDEYLNHP 356
M V+E+++ P
Sbjct: 233 MPVEEFVSQP 242
>04_04_1653 +
35070026-35070064,35070358-35070408,35070490-35070582,
35070758-35070855,35072437-35072551,35072628-35072720
Length = 162
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -1
Query: 652 ILVVVEQHTDIVH-WKLPGGYVERGEDIKDAVIREVMEETGIEAS 521
IL+ DI + W++P G ++ GED ++A RE+ EETG+ ++
Sbjct: 12 ILIFTASRIDIANTWQMPQGGIDAGEDPREAAFRELREETGVTSA 56
>02_05_1142 -
34391144-34391590,34391715-34391904,34392058-34392128,
34392403-34392515,34392656-34392749,34392843-34392908,
34393120-34393282,34393441-34393547,34393918-34394115,
34394204-34394329,34394800-34394904,34395056-34395098,
34395334-34395391,34395479-34395659,34395751-34395917,
34396010-34396249,34396341-34396781,34397147-34397272,
34397457-34397561,34397935-34398002,34398169-34398272,
34398856-34399008,34399472-34399570,34399919-34400046,
34400149-34400300,34400423-34400502
Length = 1274
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = -1
Query: 682 GGMVFNSQNQILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVT 503
G ++ + + ++V+ W P G + E+ +REV+EETG + S ++
Sbjct: 110 GAIILDDTYEKCLLVKGWKSSASWSFPRGKRSKDEEDHTCAVREVLEETGCDVS--KLLK 167
Query: 502 LR-HSHNSMFGNS-DIYIVVMLKAISDTINKSEIEIAACQWMDVDEYL 365
L + SM+ +YI+ +K + +++ EI+ W ++DE L
Sbjct: 168 LEDYIEVSMWQQRVRLYIITGVKGDTVFAPQTKKEISEISWHNIDELL 215
>01_01_0406 +
3059996-3060047,3060804-3060867,3060979-3061054,
3061142-3061243,3061327-3061542,3061615-3061695,
3062219-3062287,3062789-3062961,3063098-3063182,
3063290-3063491,3063577-3063646,3063956-3064025,
3064138-3064227,3064321-3064389,3064566-3064664,
3064814-3064924
Length = 542
Score = 38.3 bits (85), Expect = 0.008
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 847 IWFKVNIKHADWVPILAQAGFDFH-HSRDSFVMMYKWLPTNSKANLPPACHTNLGV 683
+W+++N++ A+W+ + G H H + M WLP + P A H G+
Sbjct: 277 LWYRLNVEKAEWIIYVTDVGQQRHFHMLFTAAKMAGWLPEQNGKKYPKASHVGFGL 332
>06_01_0296 -
2156895-2157160,2157435-2157527,2157932-2158031,
2158634-2158738,2158832-2158972,2159056-2159568
Length = 405
Score = 36.3 bits (80), Expect = 0.031
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = -1
Query: 676 MVFNSQNQILVVVEQHTDIVH-WKLPGGYVERGEDIKDAVIREVMEETGIE 527
+V + +N ++ Q + W G++E GE +++AV RE EETGI+
Sbjct: 223 LVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIQ 273
>05_02_0108 + 6681656-6681944,6682041-6682183,6682548-6682610
Length = 164
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 607 LPGGYVERGE-DIKDAVIREVMEETGIEASFDSIVTL 500
LPGG VE G+ D +RE EE G++ + SIVT+
Sbjct: 101 LPGGKVEEGDADATATALREAKEEIGLDPALVSIVTV 137
>05_01_0458 +
3630218-3630274,3630383-3630507,3630635-3630710,
3630884-3630985,3631075-3631290,3632217-3632297,
3633152-3633235,3633405-3633509,3634338-3634516,
3634681-3634765,3634889-3635090,3635165-3635234,
3635353-3635422,3635745-3635834,3636020-3636088,
3636520-3636618,3636804-3636914
Length = 606
Score = 33.1 bits (72), Expect = 0.29
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 847 IWFKVNIKHADWVPILAQAGFDFHHSR-DSFVMMYKWLPTNSKANLPPACHTNLGV 683
+W+++N++ A+W+ + G H + M WLP + P H G+
Sbjct: 341 LWYRLNVEKAEWIIYVTDVGQQQHFDMFFNAARMAGWLPDPKEKKYPKTNHVGFGL 396
>02_05_1236 +
35141404-35142731,35142753-35143089,35143228-35143305,
35143395-35143703,35144449-35144572,35144620-35144789
Length = 781
Score = 33.1 bits (72), Expect = 0.29
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1
Query: 625 DIVHWK-LPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDI 461
D V W L GG+V G + V+ E MEE G EA +IVT+ S +GN D+
Sbjct: 299 DTVAWTALIGGFVRAGRYKEAVVLFEEMEEAGFEADEATIVTVL-SACVGYGNIDL 353
>09_06_0215 -
21621889-21621949,21622275-21622333,21622442-21622582,
21622669-21622804,21623266-21623342,21623594-21623725,
21624915-21624938,21626147-21626365,21626401-21626718
Length = 388
Score = 31.5 bits (68), Expect = 0.89
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 613 WKLPGGYVERGEDIKDAVIREVMEE 539
W LP GY+E GE + RE +EE
Sbjct: 257 WTLPAGYLEVGESAAEGASRETLEE 281
>06_02_0265 - 13586552-13587985
Length = 477
Score = 30.7 bits (66), Expect = 1.6
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Frame = -1
Query: 820 ADWVPILAQAGFDFHHSRDSFVMMYKWLPTNSK--ANLPPACHTNLGVGGMVFNSQNQIL 647
A WVP +A H S +FV W T A +P C M N++
Sbjct: 338 ASWVPQVAVLQ---HASTGAFVTHCGWNSTLEAVAAGVPMVCWPLDAEQWM-----NKVF 389
Query: 646 VVVEQHTDI-VHWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHS 491
+V E I V PG V+ DI DA++R +ME + + ++ ++ S
Sbjct: 390 IVEEMKIGIEVRGYKPGALVQA--DIVDAILRRIMESDAQQGVLERVMAMKES 440
>01_06_1839 -
40245862-40246022,40246872-40246977,40247868-40247949,
40248337-40248437,40248531-40248568,40248624-40248675
Length = 179
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = -1
Query: 538 TGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKAISDTINKSEIEIAACQWMDVDEYLNH 359
TG EA D + T R S ++ +Y+ + + + + ++ AAC W+ V +N
Sbjct: 56 TGAEAETDRVST-RESSEKWSASAYVYLQWLGRTAATVCCRQKLASAACAWLTVFVLIND 114
Query: 358 PNVHEFN 338
E N
Sbjct: 115 AKARESN 121
>04_03_0797 +
19744815-19745030,19745190-19745273,19745375-19745473,
19745588-19745695,19747332-19747700
Length = 291
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -1
Query: 652 ILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHS 491
++V D+V K GG+ E ED+ +A RE MEE G++ + + + R++
Sbjct: 58 LMVSTPNRADLVFPK--GGW-EDDEDVYEAACREAMEEAGVKGNINVMSLYRNN 108
>11_01_0467 +
3621266-3621401,3621531-3622699,3622815-3623128,
3623276-3623937,3624040-3624401
Length = 880
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = -1
Query: 832 NIKHADWVPILAQAGFDFHHSRDSFVMMYKWLPTNSKANL--PPACHTNL 689
N++H + VPIL + D ++Y+++P NL P C +NL
Sbjct: 624 NVRHRNLVPILTACSSIDPNGNDFKALVYEFMPMGDLYNLLYAPQCDSNL 673
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = -1
Query: 631 HTDIVHWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIV 452
+++I+H G +ER E++ +RE MEE GI+A D ++ H + + + +V
Sbjct: 405 YSNIIHAHCQSGNMERAEEL----VRE-MEEDGIDAPIDVYHSMMHGYTIIQNENKCLVV 459
>07_03_0987 - 23155134-23155693,23155781-23157023
Length = 600
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 535 GIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKAISDTINKSEIEIA 398
G+ S S+VTLR HN G+ V M+++ + + N + EI+
Sbjct: 136 GLRVSLPSLVTLRAEHNGFHGDLRALSVPMVRSFNVSRNMLDGEIS 181
>12_01_1112 -
11866376-11866447,11866528-11866662,11866772-11866921,
11867263-11867338,11867426-11867559,11867655-11867747,
11868456-11868589,11868696-11868744,11869271-11869441,
11870291-11870452
Length = 391
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 313 PELDSLLNG*IHVHLDD*DTHQHPSTD 393
P+L + L I++HL + +T +HPSTD
Sbjct: 154 PQLCATLASDIYMHLREAETRKHPSTD 180
>06_01_0206 -
1573796-1574071,1574580-1574678,1574859-1574951,
1575036-1575128,1575638-1575715,1575833-1576051
Length = 285
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 2/39 (5%)
Frame = -1
Query: 610 KLPGGYV--ERGEDIKDAVIREVMEETGIEASFDSIVTL 500
+LP G + E+G+ + AV REV EETGI+ + + ++ L
Sbjct: 141 ELPAGMLDDEKGDFVGTAV-REVEEETGIKLNLEDMIDL 178
>04_03_0933 +
20906482-20906660,20907770-20907832,20910028-20910144,
20910433-20910688,20910788-20910946,20911052-20911203,
20911310-20911454
Length = 356
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = -1
Query: 742 WLPTNSKANLPPACHTNLGVGGMVFNSQNQILVVVEQHTDIVHWKL 605
WL +K + CH ++ +F + ++ + H D+ HW+L
Sbjct: 201 WLVIQAKVSKVYPCHYSIAAMVCLFGALQSTVMALCVHRDMEHWRL 246
>03_06_0517 +
34466743-34466879,34468478-34468588,34468997-34469079,
34469287-34469404,34469503-34469714,34470167-34470651,
34470731-34470801,34470898-34470955,34471161-34471192,
34471193-34471449,34471820-34471974,34472353-34472636,
34472725-34472842,34473574-34473756,34473848-34474162
Length = 872
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/46 (23%), Positives = 24/46 (52%)
Frame = +3
Query: 105 AYFHYLKIITILRGKIVVLWPFAFVVNIYSNEMYYSFESSKTRFVI 242
++ HYL+++ G + WP N++S+ + Y + TR ++
Sbjct: 93 SFVHYLEVLEGSDGDKLPGWPAFHQSNVHSSPLLYDIDKDGTREIV 138
>10_08_0373 - 17286104-17288839
Length = 911
Score = 28.3 bits (60), Expect = 8.3
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = -1
Query: 625 DIVHWK-LPGGYVERGEDIKDAVIREVMEETGIE---ASFDSIVTLRHSHNSMFGNSDIY 458
D+V W L G Y + GE + + E M+E+G+ S++++V+ + + ++
Sbjct: 151 DVVAWTALVGAYADAGELGEAFELFETMQESGVRPDVISWNTLVSGFARNGDLRAALHLF 210
Query: 457 IVVMLKAISDTINKSEIEIAAC-QWMDVDEYLN 362
+ L+ + +N I+ C Q DE LN
Sbjct: 211 DEMRLRGVKPGVNSWNCIISGCVQNARYDEALN 243
>07_01_0985 -
8297560-8297610,8297728-8297939,8298327-8298449,
8298763-8298817,8299940-8300077,8300187-8300261,
8300339-8300398,8301335-8301392,8301948-8302054,
8302484-8302558,8302643-8302838,8304222-8304301,
8308887-8309757,8310672-8310679
Length = 702
Score = 28.3 bits (60), Expect = 8.3
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = -1
Query: 688 GVGGMVFNSQNQILVVVEQHTDIVHW 611
G GG+V N++L +V++H+ ++ W
Sbjct: 311 GPGGVVSKPTNELLTMVKKHSHLIGW 336
>03_05_0583 - 25838016-25838684
Length = 222
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 766 PWSDGNQIQPGQVWA 810
P DGNQ+ PGQ WA
Sbjct: 43 PSGDGNQLDPGQSWA 57
>02_04_0300 +
21784634-21784691,21784784-21784893,21787486-21787771,
21788292-21788472,21788978-21789195,21789511-21789631,
21789703-21789800,21789894-21790105,21790199-21790311,
21790404-21790499,21790626-21790841,21790958-21791099,
21791280-21791525,21792078-21792389
Length = 802
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = -1
Query: 565 AVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIY---IVVMLKAISDTINKSEIEIAA 395
AVI ++ + G+E ++++ L G + Y + ++ +A+ +T+N+ + +A
Sbjct: 546 AVIDDLFDVGGLEQEQENLLALMEKWEEP-GEDEYYSEDVKIVFQALYNTVNEIGAKASA 604
Query: 394 CQWMDVDEYL 365
Q DV +YL
Sbjct: 605 LQGHDVTKYL 614
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,233,141
Number of Sequences: 37544
Number of extensions: 388313
Number of successful extensions: 863
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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