Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_G15
(862 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39655| Best HMM Match : NUDIX (HMM E-Value=1e-22) 135 4e-32
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 5e-28
SB_44012| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_43830| Best HMM Match : NUDIX (HMM E-Value=2.8e-09) 40 0.003
SB_27016| Best HMM Match : NUDIX (HMM E-Value=1.4e-16) 40 0.003
SB_56731| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.074
SB_18314| Best HMM Match : NUDIX (HMM E-Value=2e-05) 35 0.074
SB_14414| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_34205| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_48435| Best HMM Match : Ion_trans (HMM E-Value=1.7e-11) 31 1.2
SB_17457| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.26) 30 2.1
SB_49919| Best HMM Match : zf-CCHC (HMM E-Value=0.19) 29 4.9
SB_14923| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
>SB_39655| Best HMM Match : NUDIX (HMM E-Value=1e-22)
Length = 322
Score = 135 bits (327), Expect = 4e-32
Identities = 68/174 (39%), Positives = 100/174 (57%), Gaps = 9/174 (5%)
Frame = -1
Query: 853 RCIWFKVNIKHADWVPILAQAGFDFHHSRDSFVMMYKWLPTNSKANLPPACHTNLGVGGM 674
R +W KV + + +P++ + GF +HH+ + M+ KWLP N + +PP +GV G+
Sbjct: 80 RAMWVKVPVDKSYLIPVVFKHGFTYHHAEGNHAMLLKWLPDNVECKVPPYASHQIGVAGI 139
Query: 673 VFN-SQNQILVVVEQHTDIVH------WKLPGGYVERGEDIKDAVIREVMEETGIEASFD 515
V N +N++LVV ++ + WK PGG + GEDI REV EETGI++ F
Sbjct: 140 VVNEEENKVLVVQDRQKYKMGVLKKPIWKFPGGLSDEGEDIGHTAEREVFEETGIKSEFQ 199
Query: 514 SIVTLRHSH--NSMFGNSDIYIVVMLKAISDTINKSEIEIAACQWMDVDEYLNH 359
SIV R H S F SDI++V +K ++ I + EIAACQWM ++E L H
Sbjct: 200 SIVLFRQQHKMRSAFNKSDIFVVCRMKPLTSDIILCDDEIAACQWMPINELLVH 253
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 122 bits (293), Expect = 5e-28
Identities = 58/140 (41%), Positives = 82/140 (58%)
Frame = -1
Query: 790 GFDFHHSRDSFVMMYKWLPTNSKANLPPACHTNLGVGGMVFNSQNQILVVVEQHTDIVHW 611
GF +HH +F+++ +WLP + +LP T +GV G V Q+LVV E+ HW
Sbjct: 17 GFVYHHCYPTFIVVTQWLPKDEPNSLPTFATTYIGVAGFVVRDDGQLLVVKERFRTQDHW 76
Query: 610 KLPGGYVERGEDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVMLKAIS 431
KLPGG + EDI++ REV+EETGIEA F S+V +RH + FG SD+Y V ++ S
Sbjct: 77 KLPGGMADYNEDIRETARREVLEETGIEAEFVSLVCIRHIPDFRFGCSDLYFVCLMTPKS 136
Query: 430 DTINKSEIEIAACQWMDVDE 371
I EIA +WM+ +
Sbjct: 137 TEIKFDAKEIADAKWMETSQ 156
>SB_44012| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 176
Score = 53.2 bits (122), Expect = 3e-07
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = -1
Query: 580 EDIKDAVIREVMEETGIEASFDSIVTLRHSHNSMFGNSDIYIVVML 443
EDI++ REV+EETGIEA F S+V +RH + FG SD+Y V ++
Sbjct: 2 EDIRETARREVLEETGIEAEFVSLVCIRHIPDFRFGCSDLYFVCLM 47
>SB_43830| Best HMM Match : NUDIX (HMM E-Value=2.8e-09)
Length = 416
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -1
Query: 685 VGGMVFNSQNQILVVVE-QHTDIVHWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSI 509
V ++ +IL++ E + + + W LP G +E+ E + REV+EETG+E ++
Sbjct: 311 VAAVIIREDGKILMMREAKESCLGKWYLPAGRLEKNESLVQGAKREVIEETGLEFEPSTM 370
Query: 508 VTLRHSHNSMFGN 470
+ + +++FGN
Sbjct: 371 ICI----DTVFGN 379
>SB_27016| Best HMM Match : NUDIX (HMM E-Value=1.4e-16)
Length = 454
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -1
Query: 685 VGGMVFNSQNQILVVVE-QHTDIVHWKLPGGYVERGEDIKDAVIREVMEETGIEASFDSI 509
V ++ +IL++ E + + + W LP G +E+ E + REV+EETG+E ++
Sbjct: 185 VAAVIIREDGKILMMREAKESCLGKWYLPAGRLEKNESLVQGAKREVIEETGLEFEPSTM 244
Query: 508 VTLRHSHNSMFGN 470
+ + +++FGN
Sbjct: 245 ICI----DTVFGN 253
>SB_56731| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 35.1 bits (77), Expect = 0.074
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -1
Query: 652 ILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVMEE 539
+LV +H D W +P G +E GE+ K+ IREV EE
Sbjct: 117 LLVSSSKHPD--KWVVPAGGIEPGEEPKETAIREVQEE 152
>SB_18314| Best HMM Match : NUDIX (HMM E-Value=2e-05)
Length = 169
Score = 35.1 bits (77), Expect = 0.074
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -1
Query: 652 ILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVMEE 539
+LV +H D W +P G +E GE+ K+ IREV EE
Sbjct: 82 LLVSSSKHPD--KWVVPAGGIEPGEEPKETAIREVQEE 117
>SB_14414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 462
Score = 33.1 bits (72), Expect = 0.30
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -1
Query: 601 GGYVERGEDIKDAVIREVMEETG 533
GG+V+ GED++ AV REV EE G
Sbjct: 344 GGFVDDGEDLETAVNREVQEEMG 366
>SB_34205| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = -1
Query: 754 MMYKWLPTNSKANLPPACHTNLGVGGMVFNSQNQILVVVE-QHTDIVHWKLPGGYVERGE 578
++ +W P ++ + N G + + ++L V Q +D W +PGG +E G+
Sbjct: 515 LLGRWGPNHAADPIVTRWKRNPDTGQPLVLAGKRVLEFVAIQRSDTKEWAIPGGMMEVGD 574
Query: 577 DIKDAVIREVMEE 539
I + +E EE
Sbjct: 575 TISKTLKKEFFEE 587
>SB_48435| Best HMM Match : Ion_trans (HMM E-Value=1.7e-11)
Length = 1496
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = -1
Query: 724 KANLPPACHTNLGVGGMVFNSQNQILVVVEQHTDIVHWKLPGGYVERGEDIKDAVIREVM 545
K LP T+ GV M+ + + V Q D W +PGG VE G+ + A+ E
Sbjct: 1137 KDGLPLWKRTSAGV--MLQGGKKVLEFVAIQRKDNNQWAIPGGMVEPGQLVTQALKAEFG 1194
Query: 544 EE 539
EE
Sbjct: 1195 EE 1196
>SB_17457| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.26)
Length = 889
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +3
Query: 75 LLNVALLKLAAYFHYLKIITILRGKIVVLWPFAFVVNIYSNEMYYSFESSKTRFVIS 245
LL+ A+LK A L + T LR + ++ AFV ++SN Y +E S F+ S
Sbjct: 184 LLSAAVLKAAKSTQKLFVGTSLRDLMGIMVFLAFVAGVFSNS-YIVYEDSGLTFLTS 239
>SB_49919| Best HMM Match : zf-CCHC (HMM E-Value=0.19)
Length = 523
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +3
Query: 777 WKSNPAWASMGTQSA-CFIFTLNHMQR 854
W S +WA+MG Q CFI H QR
Sbjct: 459 WMSGNSWANMGQQCVKCFINVYPHKQR 485
>SB_14923| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 354
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Frame = +3
Query: 30 CASCQLISSFCF*KTLLNVALLKLAAYFHYLKIITIL----------RGKIVVLWPFAFV 179
C + L F T+L++ ++ L Y HY+ + I+ G V LW F+ +
Sbjct: 106 CLAMDLGQRFLAISTILHLLVVTLERY-HYIVVSRIVYAPKASRASAAGVFVFLWGFSLL 164
Query: 180 VNIYSNEMYYSFESSKTRFVISFD 251
V+ + ES+KT+F ++D
Sbjct: 165 VSFIQLVWTHEDESTKTKFDRTYD 188
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,030,418
Number of Sequences: 59808
Number of extensions: 468547
Number of successful extensions: 1062
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2455286845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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