Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_G14
(414 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0437 - 3347960-3349246 29 1.1
09_04_0110 + 14720800-14720932,14721015-14721144,14721231-147219... 29 1.1
12_02_0300 - 17057525-17057770 29 1.5
07_03_1055 - 23612968-23613038,23614625-23614763,23614854-236150... 29 1.5
06_01_0817 - 6185881-6187074 29 1.5
03_03_0249 + 15832086-15833261 29 1.9
06_03_0403 - 20435349-20435358,20435750-20436204,20436744-20438315 28 2.6
08_01_0178 - 1509100-1511214 28 3.4
02_03_0339 - 17909850-17910284 28 3.4
01_01_0055 - 415666-415767,416510-416602,416776-416850,416920-41... 28 3.4
08_02_0829 - 21604845-21605588 27 4.5
04_04_0786 - 28052981-28053040,28053123-28053222,28053447-280535... 27 4.5
01_06_1473 - 37619415-37619561,37619649-37619723,37619800-376199... 27 4.5
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 27 5.9
04_01_0578 + 7507204-7507436,7509588-7509618,7509634-7509774,750... 27 5.9
03_06_0519 - 34481751-34482722 27 5.9
02_05_0192 + 26602247-26602617,26602701-26603016 27 5.9
12_02_1125 - 26327433-26328239 27 7.8
08_02_0233 + 14593639-14594468,14594480-14594986,14595362-145958... 27 7.8
07_03_1151 + 24385272-24386543 27 7.8
06_03_1265 + 28847782-28849803 27 7.8
06_01_0932 + 7197418-7198893 27 7.8
05_07_0273 - 28857212-28857294,28857404-28858169 27 7.8
03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238 27 7.8
03_02_0361 - 7800879-7801484,7801614-7802513 27 7.8
>11_01_0437 - 3347960-3349246
Length = 428
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -2
Query: 353 PCEPPSSAAWTASRRSCRGAGRPAPTWWRATS 258
P P ++ A + S S A P P+WW + S
Sbjct: 2 PPSPSAAGAASPSNSSAASASDPTPSWWESVS 33
>09_04_0110 +
14720800-14720932,14721015-14721144,14721231-14721925,
14722133-14722140
Length = 321
Score = 29.5 bits (63), Expect = 1.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -2
Query: 404 SAAHIPSTSRPGRQTGAPCEPPSSAAWTASRRSCRGAGRPAPTWWRATSW 255
+A+ S S+ G A + P + T+ + GAG PAP + SW
Sbjct: 252 AASASASASQSGAAAAATAQTPECSTETSKMATGGGAGGPAPAFSMLESW 301
>12_02_0300 - 17057525-17057770
Length = 81
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 344 PPSSAAWTASRRSCRGAGRPAPTWWRATSWR 252
PPS+ W++ R+ R R +WWR R
Sbjct: 2 PPSTKMWSSQSRATRRRKRWGRSWWRRRKGR 32
>07_03_1055 -
23612968-23613038,23614625-23614763,23614854-23615021,
23615341-23616045,23616647-23616847
Length = 427
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 143 VINVGSDLFCIITKFIFKYIINVFNLQLTL-FSVYXHRAYRPQ 18
+I+ + FC +T F+YI+ V ++ L + Y R +RPQ
Sbjct: 320 IIDYSTPRFCHVTDEDFEYIVVVDRCRMNLGYVTYGSRPFRPQ 362
>06_01_0817 - 6185881-6187074
Length = 397
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = -2
Query: 380 SRPGRQTGAPCEPPSSAAWTASRRSCRGAGRPAPT 276
S P + C PP SAA CR G P T
Sbjct: 6 SNPPPPSATSCPPPGSAAHAGHAPLCRSCGAPTTT 40
>03_03_0249 + 15832086-15833261
Length = 391
Score = 28.7 bits (61), Expect = 1.9
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 401 AAHIPSTSRPGRQTGAPCEPPS-SAAWTASRRSCRGAGRPAPTW 273
AA P + RQ AP PP+ S A + +RRS A AP W
Sbjct: 199 AAEPPRGAPLRRQLSAPMPPPAPSPAPSTARRSLDSATGKAPRW 242
>06_03_0403 - 20435349-20435358,20435750-20436204,20436744-20438315
Length = 678
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -2
Query: 386 STSRPGRQTGAPCEPPSSAAWTASRRSCRGAGRPAPTWWRATS 258
S S + +P PS + TASR + + RPA + W TS
Sbjct: 613 SPSATSSLSSSPSPAPSPDSATASRSASPTSARPATSSWTCTS 655
>08_01_0178 - 1509100-1511214
Length = 704
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +1
Query: 229 VDVEGPRFRHDVARHQVGAGRPAPRQDLLEAVQAALDGGSQGAPVCRPGRLVDGICAA 402
++VE RFR + A + A + A + A +A LD + PG D CAA
Sbjct: 531 IEVERERFRVE-ATEDIAAAQEAAERGAHAAAKAILDRRQEALARSAPGLAGDARCAA 587
>02_03_0339 - 17909850-17910284
Length = 144
Score = 27.9 bits (59), Expect = 3.4
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -2
Query: 413 RSCSAAHIPSTSRPGRQTGAPCEPPSSAAWTASRRSCRGAGRPAPTWWRATS 258
R +AA R GR C A RRS G G P P W R S
Sbjct: 44 RLAAAAAASGDLRGGRIVAQVCSRGGGHARPCGRRSV-GGGLPVPAWQRGIS 94
>01_01_0055 -
415666-415767,416510-416602,416776-416850,416920-417071,
417147-417267,417567-418289,418408-418489,418575-418681,
418757-418822,418941-419057,419157-419402
Length = 627
Score = 27.9 bits (59), Expect = 3.4
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 404 SAAHIPSTSRPGRQTGAPCEPPSSAAWTAS 315
SAAH+PS + R + A C +SA+ +AS
Sbjct: 26 SAAHLPSAAASRRASSAACRCTASASASAS 55
>08_02_0829 - 21604845-21605588
Length = 247
Score = 27.5 bits (58), Expect = 4.5
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 362 TGAPCEPPSSAAWTASRRSCRGAGRPAPTW 273
TG+PC S W +S+R A A W
Sbjct: 145 TGSPCRADSVERWDSSKRPLSRASSTAERW 174
>04_04_0786 -
28052981-28053040,28053123-28053222,28053447-28053574,
28053654-28053821,28053901-28054013,28054135-28054287,
28054385-28054528,28054794-28055529
Length = 533
Score = 27.5 bits (58), Expect = 4.5
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -2
Query: 389 PSTSRPGRQTGAPCEPPSSAAWTASRRSCRGAGRPAPTWWRA 264
PS R G P SSAA SRR+ G G P RA
Sbjct: 42 PSFPRHGAPPHRPPTGSSSAAGALSRRASGGGGEMGPVLQRA 83
>01_06_1473 -
37619415-37619561,37619649-37619723,37619800-37619919,
37620074-37620127,37620204-37620426,37620506-37620585,
37620675-37620764,37620847-37620960,37621192-37621272,
37621383-37621490,37621677-37621722,37621802-37621899,
37621975-37622148,37622456-37622548,37623229-37623285,
37623399-37623438,37623567-37623685,37624179-37624298,
37624723-37624815,37624940-37625251,37625325-37625444,
37625545-37625658,37625731-37625910,37625996-37626110,
37626195-37626358,37626584-37626769,37626888-37626978,
37627089-37627153,37627223-37627297,37627410-37627493,
37627575-37627742,37628160-37629293
Length = 1579
Score = 27.5 bits (58), Expect = 4.5
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -3
Query: 244 DLRHRRARVVRLTAPAPAPAS 182
D RR RV R+ APAPAP +
Sbjct: 191 DREERRRRVGRVCAPAPAPTT 211
>12_02_0800 + 23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 27.1 bits (57), Expect = 5.9
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = -2
Query: 413 RSCSAAHIPSTSRPGRQTGA-PCEPPSSAAWTASRRSCRGAGRPAPTWWR 267
+SC I R TGA P P + W + S +G G+ P+W R
Sbjct: 1082 KSCEENKIRDKEIVERSTGAKPETAPEAKKWEGKKTS-KGHGKSHPSWRR 1130
>04_01_0578 +
7507204-7507436,7509588-7509618,7509634-7509774,
7509883-7509972,7511382-7511401,7512111-7512202,
7512790-7512858,7513400-7513560
Length = 278
Score = 27.1 bits (57), Expect = 5.9
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 386 STSRPGRQTGAPCEPPSSAAWTAS-RRSCRGAGRPAP 279
+T+R G T PC A+WT++ + GAG P
Sbjct: 194 TTTRHGHPTEIPCNLIGEASWTSTWKGKINGAGDKLP 230
>03_06_0519 - 34481751-34482722
Length = 323
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 374 PGRQTGAPCEPPSSAAWTASRRSCRGAGRP 285
P GA P+S++ TA+RRS R AG P
Sbjct: 77 PPATPGAAAAAPTSSSPTAARRSNRLAGAP 106
Score = 26.6 bits (56), Expect = 7.8
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = -2
Query: 389 PSTS-RPGRQTGAPCEPPSSA-------AWTASRRSCRGAGRP 285
P+T+ R R GAP +PP++A + T +RRS R AG P
Sbjct: 122 PTTAMRSNRLAGAPSDPPAAATAGPTSPSPTTARRSNRLAGAP 164
>02_05_0192 + 26602247-26602617,26602701-26603016
Length = 228
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = -2
Query: 332 AAWTASRRSCRGAGRP---APTWWRATSWR 252
A W RR RG+ R A WWRAT+ R
Sbjct: 63 ACWRQRRRCGRGSWRRRLLAAWWWRATAQR 92
>12_02_1125 - 26327433-26328239
Length = 268
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1
Query: 313 LEAVQAALDGGSQGAPVCRPGR 378
LEAV A GGS PV PGR
Sbjct: 63 LEAVAAGSGGGSTACPVRLPGR 84
>08_02_0233 +
14593639-14594468,14594480-14594986,14595362-14595856,
14596592-14596662,14597116-14597199,14597328-14597446,
14598029-14598109,14598397-14598411
Length = 733
Score = 26.6 bits (56), Expect = 7.8
Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 7/36 (19%)
Frame = -2
Query: 338 SSAAWTASRRSCR-------GAGRPAPTWWRATSWR 252
++A W RR C GRP WW T WR
Sbjct: 572 TAAVWRKLRRWCNINIAIPAEDGRPLADWWITTRWR 607
>07_03_1151 + 24385272-24386543
Length = 423
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 232 RRARVVRLTAPAPAPA 185
RR R +R+ APAPAPA
Sbjct: 160 RRRRSMRVAAPAPAPA 175
>06_03_1265 + 28847782-28849803
Length = 673
Score = 26.6 bits (56), Expect = 7.8
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 366 ADRRALRATIERSLDRFEEILSRRGPPGADLVARYVVAEPRTFDIDEP 223
A RRALRA +ERS L+R GP ++ AR E I P
Sbjct: 16 AARRALRAGVERS-RALSHALARAGPRLGEIRARLPPMEAAVRPIRAP 62
>06_01_0932 + 7197418-7198893
Length = 491
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +1
Query: 292 PAPRQDLLEAVQAALDGGSQGA--PVCRPGRLVDGI 393
P+ ++ LEA++ L GG G +C P RL+DG+
Sbjct: 152 PSRQEGALEALKQTLRGGENGVRRALCTP-RLLDGL 186
>05_07_0273 - 28857212-28857294,28857404-28858169
Length = 282
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 357 RALRATIERSLDRF-EEILS-RRGPPGADLVARYVVAEPRTF 238
R+LR +E D EE+ RR PP D++ RY+ R F
Sbjct: 148 RSLRLFMESPADDDGEEVAEPRRAPPSRDVIRRYLTKISRRF 189
>03_05_0918 - 28785233-28786613,28786894-28787140,28787773-28788238
Length = 697
Score = 26.6 bits (56), Expect = 7.8
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -2
Query: 389 PSTSRPGRQTGAPCEPPSSAAWTASRRSCRGAGRPA 282
P + PC PPSSAA T+S S + PA
Sbjct: 25 PPAKAAAAEAERPC-PPSSAATTSSSSSSSASAAPA 59
>03_02_0361 - 7800879-7801484,7801614-7802513
Length = 501
Score = 26.6 bits (56), Expect = 7.8
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -2
Query: 404 SAAHIPSTSRPGRQTGAPCE--PPSSAAWTASRRSC 303
SA +P +R G PPSSA W A RR C
Sbjct: 96 SARSVPDAARACGHDGFSMGMLPPSSALWRALRRVC 131
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,830,147
Number of Sequences: 37544
Number of extensions: 185814
Number of successful extensions: 1066
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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