Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_G14
         (414 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr...    28   2.3  
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr...    28   2.3  
Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical pr...    28   3.1  
Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical pr...    28   3.1  
Z81568-11|CAB04593.1|  681|Caenorhabditis elegans Hypothetical p...    27   7.1  
AL132943-2|CAC14392.1|  367|Caenorhabditis elegans Hypothetical ...    27   7.1  
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr...    26   9.4  
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr...    26   9.4  
AF067624-3|AAM81100.2|  678|Caenorhabditis elegans Hypothetical ...    26   9.4  

>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
           protein M142.6 protein.
          Length = 1014

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 404 SAAHIPSTSRPGRQTGAPCEPP 339
           ++ H+P   R GRQ GAP  PP
Sbjct: 504 NSQHLPQRFRGGRQRGAPPPPP 525


>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
           protein M142.6 protein.
          Length = 1014

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -2

Query: 404 SAAHIPSTSRPGRQTGAPCEPP 339
           ++ H+P   R GRQ GAP  PP
Sbjct: 504 NSQHLPQRFRGGRQRGAPPPPP 525


>Z12018-1|CAD88219.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +1

Query: 280 GAGRPAPRQDLLEAVQAALDGGSQGAPVCRPGRLVDGICAAE 405
           G+  PAP  +   A      GGS+ AP   P     G   +E
Sbjct: 450 GSSEPAPAPEAAPASSGGYSGGSEAAPEAAPAAPSGGYSGSE 491


>Z11126-8|CAD88221.2|  774|Caenorhabditis elegans Hypothetical
           protein ZK643.8 protein.
          Length = 774

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +1

Query: 280 GAGRPAPRQDLLEAVQAALDGGSQGAPVCRPGRLVDGICAAE 405
           G+  PAP  +   A      GGS+ AP   P     G   +E
Sbjct: 450 GSSEPAPAPEAAPASSGGYSGGSEAAPEAAPAAPSGGYSGSE 491


>Z81568-11|CAB04593.1|  681|Caenorhabditis elegans Hypothetical
           protein K08E3.6 protein.
          Length = 681

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 19/53 (35%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -2

Query: 413 RSCSAAHIPSTSR-PGRQTGAPCEPPSSAAWTASRRSCRGAGRPAPTWWRATS 258
           RS S   IPS  + PG+ T       SSA  T S    R   R  P W   T+
Sbjct: 292 RSLSCGSIPSCDQTPGQTTNNIGLGMSSAILTKSTLDIRTLKRGTPAWTNGTT 344


>AL132943-2|CAC14392.1|  367|Caenorhabditis elegans Hypothetical
           protein Y116F11B.5 protein.
          Length = 367

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -1

Query: 156 LSMLCDKCWI*FILYHYEIYFQIYY*CL*FAAYS 55
           + M+C+      +LY+Y   F+I + C  FA+YS
Sbjct: 79  IHMICNIIEFCPLLYNYYFSFEISFECFPFASYS 112


>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical protein
            B0496.3a protein.
          Length = 1551

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -2

Query: 386  STSRPGRQTGAPCEPPSSAAWTASRRSCRGAGRPAPTWWRATSW 255
            +T  P   TGA    PSS   +AS R   G  RP  ++  +T++
Sbjct: 1204 NTYHPTGTTGASSYRPSSYYTSASDRPVTGLRRPEESYTSSTNY 1247


>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical protein
            B0496.3b protein.
          Length = 1592

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -2

Query: 386  STSRPGRQTGAPCEPPSSAAWTASRRSCRGAGRPAPTWWRATSW 255
            +T  P   TGA    PSS   +AS R   G  RP  ++  +T++
Sbjct: 1245 NTYHPTGTTGASSYRPSSYYTSASDRPVTGLRRPEESYTSSTNY 1288


>AF067624-3|AAM81100.2|  678|Caenorhabditis elegans Hypothetical
           protein M01B12.4c protein.
          Length = 678

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 12/54 (22%), Positives = 24/54 (44%)
 Frame = -2

Query: 410 SCSAAHIPSTSRPGRQTGAPCEPPSSAAWTASRRSCRGAGRPAPTWWRATSWRN 249
           S S   +PS+  P   + +P + PS++    + ++   +GR      R  +  N
Sbjct: 596 SASLPLLPSSPEPSSSSSSPAQQPSASTEETAEKASNESGRANDVLARVAAMTN 649


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,852,471
Number of Sequences: 27780
Number of extensions: 138631
Number of successful extensions: 478
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 673122114
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)