Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_G10
(760 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 224 9e-60
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 98 1e-21
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 97 3e-21
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 84 2e-17
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 81 2e-16
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 81 2e-16
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 79 9e-16
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 77 3e-15
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 44 3e-05
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces... 28 1.7
SPBC36.08c |cog2||Golgi transport complex subunit Cog2 |Schizosa... 27 2.2
SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr 2... 27 2.9
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.8
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 26 6.7
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 26 6.7
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 25 8.9
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 224 bits (548), Expect = 9e-60
Identities = 114/196 (58%), Positives = 142/196 (72%), Gaps = 2/196 (1%)
Frame = -3
Query: 758 DDLTEDALGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLR 579
DDL + LG+AG VYE LGE+K+TFVE K+P+S TILI GPN +T+ QI+DA RDGLR
Sbjct: 336 DDLNPEVLGWAGSVYERTLGEEKYTFVEDVKDPKSATILIHGPNTYTIQQIQDATRDGLR 395
Query: 578 AINNAIEDKCVIPGAAAFEIKANTELL-KY-KDTVKGKARLGIQAYAEALLVIPKTLAVN 405
A+ NA+ED C+I GA AFE+ L K+ VKGKA++G+ AYA+ALL+IPKTLA N
Sbjct: 396 AVKNAVEDNCLIVGAGAFEVACAAHLRNKFAAKEVKGKAKMGVYAYADALLIIPKTLAAN 455
Query: 404 SGYDAQDTIVKLQEESRLNSEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASN 225
S YD QD IV LQEE+ +GLDL TG F P GI DNY V + +L+S +VIASN
Sbjct: 456 SSYDTQDAIVALQEEAS-EGYKVGLDLKTGMPFDPEVEGIYDNYRVIRHMLHSATVIASN 514
Query: 224 LLLVDEIMRAGMSSLK 177
L+ VD+I+RAG SSLK
Sbjct: 515 LISVDQILRAGRSSLK 530
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 98.3 bits (234), Expect = 1e-21
Identities = 54/187 (28%), Positives = 98/187 (52%), Gaps = 1/187 (0%)
Frame = -3
Query: 758 DDLTEDALGFA-GLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGL 582
+DL E +G GL Y LG++ +TF+ CKNP++ TIL++GP+K + +++ ++D +
Sbjct: 334 EDLREKDVGTGCGLFYIDKLGDEYYTFLTGCKNPKACTILLRGPSKDIINEVERNLQDAM 393
Query: 581 RAINNAIEDKCVIPGAAAFEIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNS 402
N + PG A E+ + L + +++G A+ +A A+A+ +IP+TL N
Sbjct: 394 AVARNVFFHPKLSPGGGATEMAVSVRLAEKARSIEGVAQWPYRAVADAIEIIPRTLVQNC 453
Query: 401 GYDAQDTIVKLQEESRLNSEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNL 222
G + + +L+ + G+D TG + G+ + VK Q + + A L
Sbjct: 454 GANPIKALTELRAKHAEGQHSFGIDGETGRVVDMHEYGVWEPEAVKLQSIKTAIESACLL 513
Query: 221 LLVDEIM 201
L VD+I+
Sbjct: 514 LRVDDIV 520
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 96.7 bits (230), Expect = 3e-21
Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 4/193 (2%)
Frame = -3
Query: 758 DDLTEDALGFAGLVYEHVLG--EDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDG 585
+DL+ D LG AG+V E G DK +E+C N ++VT+ ++G NK + + K A+ D
Sbjct: 348 EDLSSDKLGSAGIVREVSFGTTRDKILVIEKCANSRAVTVFVRGSNKMIVDEAKRALHDA 407
Query: 584 LRAINNAIEDKCVIPGAAAFEIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVN 405
L + N I D V+ G A EI + + K + + G + + A+A+AL IP LA N
Sbjct: 408 LCVVRNLIRDNRVVYGGGAAEISCSLAVTKEAEKIPGIDQYSMGAFADALDTIPLALAEN 467
Query: 404 SGYDAQDTIVKLQ-EESRLNSEPIGLD-LSTGEAFKPTDLGILDNYIVKKQILNSCSVIA 231
SG + + + ++ + N +G+D L TG ++D I KKQ L + +
Sbjct: 468 SGLSSIEALTAVKARHVKENKAYLGIDCLQTGSNDMRKQF-VIDPLIGKKQQLLLATQLC 526
Query: 230 SNLLLVDEIMRAG 192
+L V++I+ AG
Sbjct: 527 RMVLKVNDIIVAG 539
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 83.8 bits (198), Expect = 2e-17
Identities = 45/186 (24%), Positives = 95/186 (51%)
Frame = -3
Query: 755 DLTEDALGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRA 576
++ E LG E +G D+F E C ++ T++++G + +++ ++ D +
Sbjct: 341 NIEEKHLGTCDTFEERQIGGDRFNLFEGCPKAKTCTLILRGGADQFIAEVERSLHDAIMI 400
Query: 575 INNAIEDKCVIPGAAAFEIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGY 396
+ +A+++ V+ G A E++ + L Y T+ GK + I A+A +L VIP+ L N+G+
Sbjct: 401 VKHALKNNLVVAGGGACEMELSKYLRDYSLTISGKQQNFIAAFARSLEVIPRQLCDNAGF 460
Query: 395 DAQDTIVKLQEESRLNSEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLL 216
D+ + + KL+ + G+D+ + + + + VK + S + A+ +L
Sbjct: 461 DSTNILNKLRMQHAKGEMWAGVDMDSEGVANNFEKFVWEPSTVKSNAILSATEAATLILS 520
Query: 215 VDEIMR 198
VDE ++
Sbjct: 521 VDETIK 526
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 81.0 bits (191), Expect = 2e-16
Identities = 48/181 (26%), Positives = 91/181 (50%)
Frame = -3
Query: 737 LGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIE 558
LG + E ++GEDK + ++ TI+++G L + + A+ D L ++ +
Sbjct: 339 LGHCKKIEEIIIGEDKMIKFSGVEAGEACTIVLRGATHQLLDESERAIHDALAVLSQTVA 398
Query: 557 DKCVIPGAAAFEIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTI 378
+ V G E+ + + GK + + A+A+AL +P LA N+G+D+ + +
Sbjct: 399 ESRVTLGGGCAEMLMAKAVEEAATHEPGKKAVAVSAFAKALSQLPTILADNAGFDSSELV 458
Query: 377 VKLQEESRLNSEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLLVDEIMR 198
+L+ ++ +GLD+ GE GIL+ +K+ +++S S A LL VD I++
Sbjct: 459 AQLKAAHYDGNDTMGLDMDEGEIADMRAKGILEALKLKQAVVSSGSEGAQLLLRVDTILK 518
Query: 197 A 195
A
Sbjct: 519 A 519
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 80.6 bits (190), Expect = 2e-16
Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 1/189 (0%)
Frame = -3
Query: 758 DDLTEDALGFAGLVYEHVLGEDKFTFVEQCKNP-QSVTILIKGPNKHTLTQIKDAVRDGL 582
+ ED LG A LV E +K KN ++V+IL +G N TL + + ++ D L
Sbjct: 338 ESFAEDKLGHADLVEETSSSGEKIVKFSGVKNAGKTVSILCRGANLLTLEEAERSLHDAL 397
Query: 581 RAINNAIEDKCVIPGAAAFEIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNS 402
I ++ + +I G + EI+A LL++ ++G+ + I+A++EAL +IP TLA N+
Sbjct: 398 CVIRCLVKQRALIAGGGSPEIEAAQRLLEHARQLEGREAICIRAFSEALEIIPVTLAENA 457
Query: 401 GYDAQDTIVKLQEESRLNSEPIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVIASNL 222
G +A + +L+ + G+++ G + +L +V + + +
Sbjct: 458 GLNAIQVVTELRSRHANGEKTAGINVRKGIVTNILEENVLQPLLVNISAIQLAAETTKMI 517
Query: 221 LLVDEIMRA 195
+ +D+I A
Sbjct: 518 MKIDDITLA 526
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 78.6 bits (185), Expect = 9e-16
Identities = 52/188 (27%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Frame = -3
Query: 737 LGFAGLVYEHVLGEDKFTFVEQCKNPQSVTILIKGPNKHTLTQIKDAVRDGLRAINNAIE 558
LG A V + +D+ V+ K S +I+++GPN+++L +++ ++ D L + +E
Sbjct: 350 LGSAEEVVQEKFSDDECILVKGTKAYSSASIVLRGPNEYSLDEMERSMHDSLSVVKRTLE 409
Query: 557 DKCVIPGAAAFEIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQDTI 378
V+PG A E + L + ++ + +L I +A+ALL+IP+TLAVN+ D+ +
Sbjct: 410 SGKVVPGGGAVETALSIYLENFATSLGSREQLAIAEFAQALLIIPRTLAVNAAKDSTELT 469
Query: 377 VKLQ--EESRLNSE----------PIGLDLSTGEAFKPTDLGILDNYIVKKQILNSCSVI 234
KL+ + N+E GLDL G G+L+ + K + L S
Sbjct: 470 AKLRAYHAASQNAEVTDVKKRGYKNYGLDLLNGVIRDNVKAGVLEPSMSKLKSLKSAVEA 529
Query: 233 ASNLLLVD 210
+L +D
Sbjct: 530 CIAILRID 537
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 77.0 bits (181), Expect = 3e-15
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 4/185 (2%)
Frame = -3
Query: 743 DALGFAGLVYEHVLGEDKFTFVEQCKN-PQSVTILIKGPNKHTLTQIKDAVRDGLRAINN 567
+ +G +V +G D+ T Q ++ ++ TI+++G K L ++ A+ DG+ +
Sbjct: 342 EEMGSVDVVETIEIGGDRVTVFRQVEDITRTATIVLRGATKTYLDDLERAIDDGVNIVKA 401
Query: 566 AIEDKCVIPGAAAFEIKANTELLKYKDTVKGKARLGIQAYAEALLVIPKTLAVNSGYDAQ 387
++D +I GA A +++ L+ + G + I+ Y EA V+P+T++ N+G D
Sbjct: 402 LVKDNRLIFGAGASDMQLCIRLISVGEKTPGIYQHAIKQYGEAFEVVPRTISENAGLDPT 461
Query: 386 DTIVKL-QEESRLNSEPIGLDL--STGEAFKPTDLGILDNYIVKKQILNSCSVIASNLLL 216
D I KL + N E IG+D+ + GI D + KK + + +L
Sbjct: 462 DVISKLYAAHHKENGESIGVDVECENDGTLDAKEAGIFDVLLAKKSAIRLATETVLTVLN 521
Query: 215 VDEIM 201
VD+++
Sbjct: 522 VDQVV 526
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 43.6 bits (98), Expect = 3e-05
Identities = 36/140 (25%), Positives = 66/140 (47%)
Frame = -3
Query: 647 ILIKGPNKHTLTQIKDAVRDGLRAINNAIEDKCVIPGAAAFEIKANTELLKYKDTVKGKA 468
I + G ++ + + KD + D L A+ A+ + V+PGA +KA+ L T
Sbjct: 411 IKVGGSSEVEVNEKKDRIVDALNAVKAAVSEG-VLPGAGTSFVKASLRLGDIP-TNNFDQ 468
Query: 467 RLGIQAYAEALLVIPKTLAVNSGYDAQDTIVKLQEESRLNSEPIGLDLSTGEAFKPTDLG 288
+LG++ +A+ +T+ N+G + + KL+E IG D++ ++G
Sbjct: 469 KLGVEIVRKAITRPAQTILENAGLEGNLIVGKLKELYGKEFN-IGYDIAKDRFVDLNEIG 527
Query: 287 ILDNYIVKKQILNSCSVIAS 228
+LD V + L S +AS
Sbjct: 528 VLDPLKVVRTGLVDASGVAS 547
>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1154
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/70 (27%), Positives = 27/70 (38%)
Frame = +1
Query: 31 PPPGAVRVSGHXPXLHQNAXXVASKMLNACKSSQXLEXPQNKTFFYYYPLRLLIPALIIS 210
PP VR + P SK + Q E P N + YP ++ P +
Sbjct: 349 PPSAPVREKRNRPAHSAQISRSISKTSRMYR--QTAEEPLNSYSLHVYPQKITAPTSPYA 406
Query: 211 STRRRLLAIT 240
+T+ LLA T
Sbjct: 407 ATQEELLAFT 416
>SPBC36.08c |cog2||Golgi transport complex subunit Cog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 191
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -3
Query: 284 LDNYIVKKQILNSCSVIASNLLLVDEIMR 198
+ N + KQ + + +IASNLLL+D+I++
Sbjct: 118 IQNNLKHKQDVENEKLIASNLLLLDQILK 146
>SPBC1604.06c |||CBF/Mak21 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 27.1 bits (57), Expect = 2.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 433 KRASA*AWIPRRALPLTVSLYFSSSVLALISKAAAP 540
KRA +W+ +LPL+V+LY VL +I K P
Sbjct: 227 KRAFQESWLSALSLPLSVNLY--KQVLNVIHKRVIP 260
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1379
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +1
Query: 7 SNCSASPGPPPGAVRVSGHXPXLHQNAXXVASKMLNACKSSQXLEXPQNKTFFYYY 174
S+ S S A++ P +H+N + +K A S L PQ K +Y+
Sbjct: 1147 SDVSGSSSAVRAAMKADKIFPAVHENPPPLKTKQSIAKPSPHTLRVPQKKHKHFYH 1202
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 686 TFVEQCKNPQSVTILIKGPNKH 621
++ E P S+T L K PNKH
Sbjct: 562 SYRESVSEPSSMTALSKSPNKH 583
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 686 TFVEQCKNPQSVTILIKGPNKH 621
++ E P S+T L K PNKH
Sbjct: 562 SYRESVSEPSSMTALSKSPNKH 583
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +3
Query: 594 NCIFDLCQGMLVGSLDEDGNRLWILALFNKGK 689
N ++D+ Q +L +D+D N + +F +GK
Sbjct: 544 NVVYDVVQQVLNAPMDKDQNYALAVDMFKQGK 575
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,822,430
Number of Sequences: 5004
Number of extensions: 55180
Number of successful extensions: 182
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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