Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_G08
(490 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65; Eukary... 192 3e-48
UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7; Eukaryo... 192 4e-48
UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73; Eukary... 163 2e-39
UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2; Dikarya... 161 8e-39
UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130, w... 159 4e-38
UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8; Eu... 148 8e-35
UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11; Eukaryo... 139 4e-32
UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16; Eu... 126 3e-28
UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomon... 117 2e-25
UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1; Encepha... 110 2e-23
UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1; Arabido... 101 9e-21
UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiell... 88 9e-17
UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24; Archa... 79 5e-14
UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5; Methan... 71 2e-11
UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environment... 70 2e-11
UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8; Euryar... 66 4e-10
UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3; Euryar... 64 1e-09
UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4; Thermoprote... 64 2e-09
UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4; Thermo... 64 2e-09
UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3; Pyroba... 61 1e-08
UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum... 55 7e-07
UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-lik... 54 1e-06
UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1; Nanoar... 52 9e-06
UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2; Thermoprote... 49 6e-05
UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal ... 48 8e-05
UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase domain-conta... 37 0.28
UniRef50_A3A906 Cluster: Putative uncharacterized protein; n=1; ... 36 0.64
UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycopla... 36 0.64
UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing... 35 0.84
UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1; ... 35 0.84
UniRef50_A1UB26 Cluster: Putative uncharacterized protein; n=3; ... 35 1.1
UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2; Bacteri... 34 2.0
UniRef50_Q14591-2 Cluster: Isoform 2 of Q14591 ; n=2; Homo sapie... 33 2.6
>UniRef50_P62280 Cluster: 40S ribosomal protein S11; n=65;
Eukaryota|Rep: 40S ribosomal protein S11 - Homo sapiens
(Human)
Length = 158
Score = 192 bits (469), Expect = 3e-48
Identities = 90/118 (76%), Positives = 104/118 (88%), Gaps = 2/118 (1%)
Frame = -1
Query: 445 MAD-QTERSFQKQPTVFLNRKKGI-GVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKC 272
MAD QTER++QKQPT+F N+K+ + G K RY+K++GLGFKTP+EAIEGTYIDKKC
Sbjct: 1 MADIQTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKC 60
Query: 271 PFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCLQ 98
PFTGNVSIRGRIL+GVV KMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC +
Sbjct: 61 PFTGNVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFR 118
Score = 60.1 bits (139), Expect = 3e-08
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = -2
Query: 102 YRDVEIGDIVTIGECRPLXKTVRXNVLKVAKGKG 1
+RDV+IGDIVT+GECRPL KTVR NVLKV K G
Sbjct: 117 FRDVQIGDIVTVGECRPLSKTVRFNVLKVTKAAG 150
>UniRef50_A6YPG5 Cluster: 40S ribosomal protein S11; n=7;
Eukaryota|Rep: 40S ribosomal protein S11 - Triatoma
infestans (Assassin bug)
Length = 194
Score = 192 bits (468), Expect = 4e-48
Identities = 93/120 (77%), Positives = 101/120 (84%)
Frame = -1
Query: 457 LSSKMADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDK 278
L K +TE++FQKQP VFL K S+KPLR +K VGLGFKTPREAIEGTYIDK
Sbjct: 40 LGFKTPRETEKAFQKQPHVFLASKVS-----SKKPLRRYKSVGLGFKTPREAIEGTYIDK 94
Query: 277 KCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCLQ 98
KCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY+ KYNRFEKRH+NMSVHLSPC +
Sbjct: 95 KCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYVRKYNRFEKRHKNMSVHLSPCFR 154
Score = 83.8 bits (198), Expect = 2e-15
Identities = 37/47 (78%), Positives = 42/47 (89%)
Frame = -1
Query: 445 MADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPRE 305
MADQTERSFQKQPT+FLNRKKG+GVK+ LRY ++VGLGFKTPRE
Sbjct: 1 MADQTERSFQKQPTIFLNRKKGLGVKKKANALRYIRNVGLGFKTPRE 47
Score = 63.3 bits (147), Expect = 3e-09
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = -2
Query: 102 YRDVEIGDIVTIGECRPLXKTVRXNVLKVAKGKG 1
+RDVEIGD+VT+GECRPL KTVR NVLKV KG G
Sbjct: 153 FRDVEIGDVVTVGECRPLSKTVRFNVLKVTKGTG 186
>UniRef50_P26781 Cluster: 40S ribosomal protein S11; n=73;
Eukaryota|Rep: 40S ribosomal protein S11 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 156
Score = 163 bits (395), Expect = 2e-39
Identities = 75/120 (62%), Positives = 96/120 (80%)
Frame = -1
Query: 457 LSSKMADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDK 278
+S+++ Q+ER+FQKQP +F N K VK S++ R++K+ GLGFKTP+ AIEG+YIDK
Sbjct: 1 MSTELTVQSERAFQKQPHIFNNPK----VKTSKRTKRWYKNAGLGFKTPKTAIEGSYIDK 56
Query: 277 KCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCLQ 98
KCPFTG VSIRG+ILTG V KM RTIVIRR YLHY+PKYNR+EKRH+N+ VH+SP +
Sbjct: 57 KCPFTGLVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFR 116
Score = 49.2 bits (112), Expect = 5e-05
Identities = 21/35 (60%), Positives = 29/35 (82%)
Frame = -2
Query: 105 AYRDVEIGDIVTIGECRPLXKTVRXNVLKVAKGKG 1
A+R V++GDIVT+G+CRP+ KTVR NV+KV+ G
Sbjct: 114 AFR-VQVGDIVTVGQCRPISKTVRFNVVKVSAAAG 147
>UniRef50_P79013 Cluster: 40S ribosomal protein S11; n=2;
Dikarya|Rep: 40S ribosomal protein S11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 152
Score = 161 bits (391), Expect = 8e-39
Identities = 74/125 (59%), Positives = 95/125 (76%), Gaps = 1/125 (0%)
Frame = -1
Query: 457 LSSKMADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDK 278
+++++ Q+ER+FQKQP +F N KKG G R++KDVGLGFKTP EAI G Y+DK
Sbjct: 1 MATELVVQSERAFQKQPHIFQNAKKGAG-------RRWYKDVGLGFKTPAEAIYGEYVDK 53
Query: 277 KCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCLQ 98
KCPF G VSIRGRILTG V KM RTI+IRR+YLH++PKYNR+EKRH+N++ H+SP +
Sbjct: 54 KCPFVGQVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFR 113
Query: 97 -GRGD 86
GD
Sbjct: 114 INEGD 118
Score = 46.0 bits (104), Expect = 5e-04
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = -2
Query: 105 AYRDVEIGDIVTIGECRPLXKTVRXNVLKVAK 10
A+R + GD+VT+G+CRPL KTVR NVL+V K
Sbjct: 111 AFR-INEGDVVTVGQCRPLSKTVRFNVLRVVK 141
>UniRef50_A0BVQ1 Cluster: Chromosome undetermined scaffold_130,
whole genome shotgun sequence; n=18; Eukaryota|Rep:
Chromosome undetermined scaffold_130, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 188
Score = 159 bits (385), Expect = 4e-38
Identities = 71/110 (64%), Positives = 89/110 (80%)
Frame = -1
Query: 436 QTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGN 257
+ +R+FQKQ +F N KK + K++ K +RY K+VGLGFK P++AIEG YIDKKCPFTGN
Sbjct: 34 KNQRAFQKQEGIFQNSKKLLA-KKTSKGVRYWKEVGLGFKVPKDAIEGNYIDKKCPFTGN 92
Query: 256 VSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 107
VS+RG IL G+V KM RTI+IRRDYLHY+ KYNR+EKRHRN+ VH+SP
Sbjct: 93 VSVRGAILKGIVISTKMTRTIIIRRDYLHYVAKYNRYEKRHRNVPVHISP 142
Score = 44.0 bits (99), Expect = 0.002
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = -2
Query: 105 AYRDVEIGDIVTIGECRPLXKTVRXNVLKV 16
A+ V+ GDIV G+CRPL KTVR NVLKV
Sbjct: 143 AFGPVKEGDIVVCGQCRPLSKTVRFNVLKV 172
>UniRef50_Q9U9A0 Cluster: Putative ribosomal protein S11; n=8;
Eukaryota|Rep: Putative ribosomal protein S11 - Physarum
polycephalum (Slime mold)
Length = 158
Score = 148 bits (358), Expect = 8e-35
Identities = 66/113 (58%), Positives = 86/113 (76%), Gaps = 1/113 (0%)
Frame = -1
Query: 436 QTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGN 257
QT +QKQ +F+ +K+ +G+K + RY + VGLG+KTP+ A+EGT++D KCPFTGN
Sbjct: 6 QTGLFYQKQKPIFVGKKRLLGLKLKKSDTRYVRQVGLGYKTPKAALEGTFVDDKCPFTGN 65
Query: 256 VSIRGRILTGVVQKM-KMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCL 101
VSIRGRIL GVV KM+RT+V+RR+YLHY+ KY R+EKRH N SVH SP L
Sbjct: 66 VSIRGRILRGVVVSAGKMKRTVVVRRNYLHYIQKYKRYEKRHTNFSVHCSPAL 118
Score = 48.0 bits (109), Expect = 1e-04
Identities = 22/31 (70%), Positives = 24/31 (77%)
Frame = -2
Query: 96 DVEIGDIVTIGECRPLXKTVRXNVLKVAKGK 4
DV+ GD VT+GECRPL KTVR NVLKV K
Sbjct: 119 DVKEGDTVTVGECRPLSKTVRFNVLKVHGSK 149
>UniRef50_Q7XLC9 Cluster: OSJNBa0070C17.20 protein; n=11;
Eukaryota|Rep: OSJNBa0070C17.20 protein - Oryza sativa
subsp. japonica (Rice)
Length = 185
Score = 139 bits (336), Expect = 4e-32
Identities = 73/141 (51%), Positives = 90/141 (63%), Gaps = 25/141 (17%)
Frame = -1
Query: 445 MADQTERSFQKQPTVFLNRKK-GIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCP 269
MA+QTE++F KQP VFL+ KK G G K + R+ K +GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 268 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN--------------------- 152
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISD 120
Query: 151 ---RFEKRHRNMSVHLSPCLQ 98
R+EKRH N+ H+SPC +
Sbjct: 121 LGCRYEKRHSNIPAHVSPCFR 141
Score = 41.1 bits (92), Expect = 0.013
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = -2
Query: 93 VEIGDIVTIGECRPLXKTVRXNVLKV 16
V+ GD V IG+CRPL KTVR NVLKV
Sbjct: 142 VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>UniRef50_Q4QCN7 Cluster: Ribosomal protein s11 homolog; n=16;
Eukaryota|Rep: Ribosomal protein s11 homolog -
Leishmania major
Length = 141
Score = 126 bits (303), Expect = 3e-28
Identities = 54/90 (60%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = -1
Query: 352 LRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYL 173
+RY K +GLGFKTP +A+ G YID+KCPFT NV IRGRIL GVV KM RTI+IRR+YL
Sbjct: 15 IRYSKKIGLGFKTPAKALNGKYIDRKCPFTSNVVIRGRILRGVVHSTKMHRTIIIRRNYL 74
Query: 172 HYLPKYNRFEKRHRNMSVHLSPCLQGR-GD 86
H++ KY R++KRH++++VH SP + GD
Sbjct: 75 HFIKKYQRYQKRHKSLAVHCSPAFDPKQGD 104
Score = 39.9 bits (89), Expect = 0.030
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = -2
Query: 114 CRLAYRDVEIGDIVTIGECRPLXKTVRXNVLKV 16
C A+ D + GD V IG+CRPL KT+R NVL+V
Sbjct: 94 CSPAF-DPKQGDEVVIGQCRPLSKTIRYNVLEV 125
>UniRef50_Q15GB4 Cluster: 60S ribosomal protein 11; n=1; Rhodomonas
salina|Rep: 60S ribosomal protein 11 - Rhodomonas salina
(Cryptomonas salina)
Length = 145
Score = 117 bits (281), Expect = 2e-25
Identities = 49/89 (55%), Positives = 64/89 (71%)
Frame = -1
Query: 364 SRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIR 185
++K K++G+G K P EAI Y DKKCPF G +SIRGRIL G V KM+R+++IR
Sbjct: 17 TKKKKNSFKNIGMGLKAPLEAINNNYFDKKCPFRGLISIRGRILRGTVISTKMKRSVIIR 76
Query: 184 RDYLHYLPKYNRFEKRHRNMSVHLSPCLQ 98
RDYLH++ KY RFEKRH+N+ H SPC +
Sbjct: 77 RDYLHWISKYKRFEKRHKNIPCHCSPCFR 105
Score = 46.8 bits (106), Expect = 3e-04
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = -2
Query: 123 PYICRLAYRDVEIGDIVTIGECRPLXKTVRXNVLKVAK 10
P C +R V+ GD+VTIG+CRPL KT+R NVL++ K
Sbjct: 97 PCHCSPCFR-VQEGDLVTIGQCRPLSKTIRFNVLRIDK 133
>UniRef50_Q8SS53 Cluster: 40S RIBOSOMAL PROTEIN S11; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S11
- Encephalitozoon cuniculi
Length = 156
Score = 110 bits (264), Expect = 2e-23
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 3/91 (3%)
Frame = -1
Query: 325 GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRF 146
GFK P A YIDKKCPFTG+V++RGR+ GVV+KMK ++TIV+ +Y+HY KY R+
Sbjct: 38 GFKAPETAYTRQYIDKKCPFTGDVNVRGRLFKGVVKKMKAEKTIVVVANYVHYSKKYKRY 97
Query: 145 EKRHRNMSVHLSPCLQGR---GDW*YCNDRR 62
+RH N SVH+SPC +G GD C + R
Sbjct: 98 SRRHTNFSVHMSPCFEGMINVGDTVICGETR 128
>UniRef50_Q42068 Cluster: Ribosomal protein 40S-S11; n=1;
Arabidopsis thaliana|Rep: Ribosomal protein 40S-S11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 103
Score = 101 bits (242), Expect = 9e-21
Identities = 50/99 (50%), Positives = 67/99 (67%)
Frame = -1
Query: 460 SLSSKMADQTERSFQKQPTVFLNRKKGIGVKRSRKPLRYHKDVGLGFKTPREAIEGTYID 281
S +S M ++ + F L R+ G KR K R+ K++GLGFKTPREAI+G Y+D
Sbjct: 6 SSTSAMGNRLRKLFLSSLRSSLARRNLEG-KRPGKVERFWKNIGLGFKTPREAIDGAYVD 64
Query: 280 KKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 164
KKCPFTG VSIRGRIL + + +MQ TI++ RDYLH++
Sbjct: 65 KKCPFTGTVSIRGRILVWYLPQCEMQSTIIVARDYLHFV 103
>UniRef50_Q3LW88 Cluster: Ribosomal protein S11; n=1; Bigelowiella
natans|Rep: Ribosomal protein S11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 119
Score = 88.2 bits (209), Expect = 9e-17
Identities = 38/62 (61%), Positives = 49/62 (79%)
Frame = -1
Query: 286 IDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP 107
IDKKCPF G +++RGRIL G V+K+KM+ T++IR DYL +L KYNRF KRH+N+ HLS
Sbjct: 23 IDKKCPFYGKINLRGRILRGKVRKIKMKSTVIIRIDYLKFLKKYNRFVKRHKNIPAHLSN 82
Query: 106 CL 101
L
Sbjct: 83 LL 84
Score = 41.9 bits (94), Expect = 0.007
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -2
Query: 90 EIGDIVTIGECRPLXKTVRXNVLKV 16
++GDIV I ECRP+ KTVR NV+KV
Sbjct: 87 KVGDIVIIAECRPISKTVRFNVIKV 111
>UniRef50_Q8TW21 Cluster: 30S ribosomal protein S17P; n=24;
Archaea|Rep: 30S ribosomal protein S17P - Methanopyrus
kandleri
Length = 118
Score = 79.0 bits (186), Expect = 5e-14
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = -1
Query: 349 RYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLH 170
R KD+GLG K PR + D CPF GN+ +RG IL GVV +M +T+++ R+Y
Sbjct: 6 RMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREYYR 61
Query: 169 YLPKYNRFEKRHRNMSVHLSPCLQGR-GD 86
Y KY R+E+R + H PC+ + GD
Sbjct: 62 YDRKYERWERRRSRIPAHNPPCIDAQEGD 90
>UniRef50_Q8PV41 Cluster: 30S ribosomal protein S17P; n=5;
Methanomicrobia|Rep: 30S ribosomal protein S17P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 109
Score = 70.5 bits (165), Expect = 2e-11
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = -1
Query: 340 KDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 161
+D+GL P E + Y CPF G + +RG+IL G V KM T+VI R Y+ +
Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58
Query: 160 KYNRFEKRHRNMSVHLSPCLQGR-GD 86
KY R+EKR + H C+ + GD
Sbjct: 59 KYQRYEKRRSKIHAHNPACISAKVGD 84
Score = 32.7 bits (71), Expect = 4.5
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = -2
Query: 90 EIGDIVTIGECRPLXKTVRXNVLK 19
++GDIVTI ECRP+ KT V+K
Sbjct: 81 KVGDIVTIVECRPISKTKSFVVVK 104
>UniRef50_Q2QAS1 Cluster: Ribosomal protein S17; n=2; environmental
samples|Rep: Ribosomal protein S17 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 111
Score = 70.1 bits (164), Expect = 2e-11
Identities = 28/81 (34%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = -1
Query: 340 KDVGLGFKT-PREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 164
+D+G+ P+ +G D+ CPF G++ +RG+I+ G + K+ MQ++I++ R+++ Y+
Sbjct: 2 RDIGIELNNQPKGEWDG---DENCPFYGSLRLRGQIIEGTIAKVGMQKSIIVEREHIRYM 58
Query: 163 PKYNRFEKRHRNMSVHLSPCL 101
K+ R+EKR R + HL C+
Sbjct: 59 QKFERYEKRTRRYAAHLPSCI 79
Score = 33.1 bits (72), Expect = 3.4
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2
Query: 96 DVEIGDIVTIGECRPLXKTVRXNVLK 19
DV +GD V I ECRPL KT+ V++
Sbjct: 81 DVNVGDSVRIMECRPLSKTITFCVIE 106
>UniRef50_P12741 Cluster: 30S ribosomal protein S17P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 112
Score = 66.1 bits (154), Expect = 4e-10
Identities = 31/78 (39%), Positives = 45/78 (57%)
Frame = -1
Query: 334 VGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKY 155
+GL + P E T D+ CPF G +S+RG+ L G V M++T+V+ R+Y +PKY
Sbjct: 3 LGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPKY 58
Query: 154 NRFEKRHRNMSVHLSPCL 101
+RF KR + H CL
Sbjct: 59 DRFMKRRSRVPAHAPDCL 76
Score = 33.5 bits (73), Expect = 2.6
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2
Query: 96 DVEIGDIVTIGECRPLXKT 40
D+ +GD VTI ECRPL KT
Sbjct: 77 DLAVGDTVTIAECRPLSKT 95
>UniRef50_Q9HIR8 Cluster: 30S ribosomal protein S17P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S17P -
Thermoplasma acidophilum
Length = 109
Score = 64.5 bits (150), Expect = 1e-09
Identities = 29/83 (34%), Positives = 47/83 (56%)
Frame = -1
Query: 346 YHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHY 167
Y +++GL K P E D CP+ G +S+RG++LTG V M ++ V+ R+Y Y
Sbjct: 2 YTRNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQY 57
Query: 166 LPKYNRFEKRHRNMSVHLSPCLQ 98
+PKY R + + VH+ C++
Sbjct: 58 IPKYERKATKIKKYHVHVPDCIK 80
>UniRef50_A3H7C0 Cluster: Ribosomal protein S17; n=4;
Thermoprotei|Rep: Ribosomal protein S17 - Caldivirga
maquilingensis IC-167
Length = 152
Score = 63.7 bits (148), Expect = 2e-09
Identities = 30/81 (37%), Positives = 51/81 (62%)
Frame = -1
Query: 340 KDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLP 161
+ +G+ + P +A+ D KCP+ G+V +RG IL G V + M + +VI+ ++LHY P
Sbjct: 32 RHIGVPWLLPPKAVCN---DDKCPWHGHVKVRGTILEGRVVSVYMGQ-VVIQHEWLHYSP 87
Query: 160 KYNRFEKRHRNMSVHLSPCLQ 98
KY R+ ++ RN+ HL C++
Sbjct: 88 KYKRYIRKRRNIHAHLPSCIK 108
>UniRef50_Q9YF81 Cluster: 30S ribosomal protein S17P; n=4;
Thermoprotei|Rep: 30S ribosomal protein S17P - Aeropyrum
pernix
Length = 114
Score = 63.7 bits (148), Expect = 2e-09
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = -1
Query: 283 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 104
D CP+ G + +RG +L GVV K + +R +V++ YL+Y KYNR+E+R + + HL C
Sbjct: 24 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDC 83
Query: 103 L 101
+
Sbjct: 84 I 84
Score = 31.9 bits (69), Expect = 7.9
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2
Query: 93 VEIGDIVTIGECRPLXKTVRXNVLKVAK 10
V+ GD+V IGE P+ KTV+ VL V +
Sbjct: 86 VKEGDVVVIGETMPISKTVKFTVLGVKR 113
>UniRef50_Q8ZWL3 Cluster: 30S ribosomal protein S17P; n=3;
Pyrobaculum|Rep: 30S ribosomal protein S17P -
Pyrobaculum aerophilum
Length = 123
Score = 60.9 bits (141), Expect = 1e-08
Identities = 22/62 (35%), Positives = 42/62 (67%)
Frame = -1
Query: 283 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 104
D CP+ G++ +R ++L V+K++M + V+ ++LHY+ KYNR+E+R + M V + C
Sbjct: 20 DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIRKYNRYERRRKRMRVRVPEC 79
Query: 103 LQ 98
++
Sbjct: 80 IE 81
>UniRef50_A1RXG3 Cluster: Ribosomal protein S17; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17 - Thermofilum
pendens (strain Hrk 5)
Length = 111
Score = 55.2 bits (127), Expect = 7e-07
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = -1
Query: 283 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 104
D CP+ G + +RG++L V+K+KM V +YL+Y KY R+E R + V + PC
Sbjct: 21 DPLCPWHGELPVRGQVLRLRVEKVKMHNVAVAVHEYLYYNEKYKRYEVRRKKKHVRVPPC 80
Query: 103 L 101
+
Sbjct: 81 I 81
>UniRef50_Q8TP90 Cluster: Putative 30S ribosomal protein S17P-like;
n=1; Methanosarcina acetivorans|Rep: Putative 30S
ribosomal protein S17P-like - Methanosarcina acetivorans
Length = 486
Score = 54.4 bits (125), Expect = 1e-06
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Frame = -1
Query: 340 KDVGL-GFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 164
+D+G+ G K P E D +CPF G +S+RG+IL G+V KM + IV++R +
Sbjct: 2 RDIGINGIKLPTEDCN----DPECPFHGKLSVRGQILKGIVISDKMTKNIVMKRYREKWS 57
Query: 163 PKYNRFEKRHRNMSVHLSPCLQGR-GD 86
KY R ++ + + PC++ + GD
Sbjct: 58 YKYQRKQRVSSKIHAYSPPCMEAKIGD 84
Score = 31.9 bits (69), Expect = 7.9
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -2
Query: 96 DVEIGDIVTIGECRPLXK 43
+ +IGDI+TI ECRPL K
Sbjct: 79 EAKIGDIITIAECRPLNK 96
>UniRef50_Q74NJ4 Cluster: 30S ribosomal protein S17P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S17P -
Nanoarchaeum equitans
Length = 113
Score = 51.6 bits (118), Expect = 9e-06
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = -1
Query: 283 DKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPC 104
DKKCP G++ +RG G V K +T+ I ++LPKY R+E R ++ +L C
Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75
Query: 103 LQ 98
L+
Sbjct: 76 LK 77
Score = 32.3 bits (70), Expect = 6.0
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = -2
Query: 99 RDVEIGDIVTIGECRPLXKTVRXNVL-KVAKG 7
+D++ GD V IGE RPL KT VL K+ KG
Sbjct: 77 KDIKEGDYVLIGETRPLSKTKHFVVLGKLKKG 108
>UniRef50_A0RVY2 Cluster: Ribosomal protein S17; n=2;
Thermoprotei|Rep: Ribosomal protein S17 - Cenarchaeum
symbiosum
Length = 109
Score = 48.8 bits (111), Expect = 6e-05
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = -1
Query: 340 KDVGLGFKTP-REAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYL 164
+++GL P REA +G DK PF G + IRG++ G + K + T+VI ++ Y
Sbjct: 3 REIGLPVPAPSREAADG---DKNNPFNGTLPIRGKLFEGTIVSAKARSTVVIEKESPVYF 59
Query: 163 PKYNRFEKRHRNMSVHL 113
K+ R+ + + H+
Sbjct: 60 TKFKRYARGRSRIHAHV 76
>UniRef50_UPI0000D9F1CD Cluster: PREDICTED: similar to ribosomal
protein S11; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S11 - Macaca mulatta
Length = 84
Score = 48.4 bits (110), Expect = 8e-05
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = -2
Query: 141 NGTGTCPYICRLAYRDVEIGDIVTIGECRPLXKTVRXNVLKVAKGKG 1
+G G +RDV IG IVT+GEC+PL KTVR + KV K G
Sbjct: 30 SGGGNMSIHFSTCFRDVHIGHIVTVGECQPLSKTVRFIMFKVTKAVG 76
>UniRef50_Q6C8W4 Cluster: Patatin-like phospholipase
domain-containing protein YALI0D16379g; n=1; Yarrowia
lipolytica|Rep: Patatin-like phospholipase
domain-containing protein YALI0D16379g - Yarrowia
lipolytica (Candida lipolytica)
Length = 818
Score = 36.7 bits (81), Expect = 0.28
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = -1
Query: 373 VKRSRKPLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTI 194
+K P+ V P E ++ YI K +T S+ V K KM T
Sbjct: 82 LKEEEVPVESSTPVSSEEMLPLEPVQKEYITSKHDWTPVFSVLKN--NNSVNKRKMSHT- 138
Query: 193 VIRRDYLHYLPKYNRFEKRHRNMS 122
++ D+ HYL Y++ EKR R S
Sbjct: 139 ALKSDFKHYLDMYDKEEKRRRGKS 162
>UniRef50_A3A906 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 74
Score = 35.5 bits (78), Expect = 0.64
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = -1
Query: 154 NRFEKRHRNMSVHLS-PCLQGRGDW*YCNDRRMQTFXQNSEXQCFE 20
+R+EKRH N++ +++ P L G C+ R +Q Q+ E QCFE
Sbjct: 4 HRYEKRHPNINANINFPMLSCEGTR-SCDHRAVQATVQDCEAQCFE 48
>UniRef50_Q601K5 Cluster: 30S ribosomal protein S17; n=4; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S17 -
Mycoplasma hyopneumoniae (strain 232)
Length = 98
Score = 35.5 bits (78), Expect = 0.64
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -2
Query: 90 EIGDIVTIGECRPLXKTVRXNVLKVAKGKG 1
E+GD V I ECRP+ KT +++V + KG
Sbjct: 67 EVGDFVKIAECRPISKTKHFRLVEVLQKKG 96
>UniRef50_UPI00006CFC97 Cluster: ribosomal protein S17 containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
ribosomal protein S17 containing protein - Tetrahymena
thermophila SB210
Length = 205
Score = 35.1 bits (77), Expect = 0.84
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -1
Query: 244 GRILTG-VVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSP--CLQG 95
GR L G V+Q KM +T+ ++ DY ++ PK F+ + VH S C+ G
Sbjct: 24 GRELFGTVIQHGKMDKTVTVKVDYRYWYPKTKEFKSKTSKYQVHDSENFCVTG 76
>UniRef50_Q59NQ3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 162
Score = 35.1 bits (77), Expect = 0.84
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +2
Query: 110 RQMYGHVPVPFLEPIVFG*VVKVIXXXXXXXXXXXXXXXXGEDAAADRNVASEGTLLVNV 289
R + ++ V F ++F V++VI G+D +D N SE T VNV
Sbjct: 91 RDVGSNILVSFFVSVIFWNVMQVISSDNDGTVHFGGNNSTGQDFTSDGNSTSEWTFFVNV 150
Query: 290 GTLNRLTGSLET 325
T N ET
Sbjct: 151 RTFNGSFWGFET 162
>UniRef50_A1UB26 Cluster: Putative uncharacterized protein; n=3;
Mycobacterium|Rep: Putative uncharacterized protein -
Mycobacterium sp. (strain KMS)
Length = 2125
Score = 34.7 bits (76), Expect = 1.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -1
Query: 355 PLRYHKDVGLGFKTPREAIEGTYIDKKCPFTGN 257
P Y +D G GF PRE GT++ +CP G+
Sbjct: 2015 PAEYKRDDGEGFYWPREIDPGTWLSVRCPVEGS 2047
>UniRef50_A4M9T1 Cluster: 30S ribosomal protein S17; n=2;
Bacteria|Rep: 30S ribosomal protein S17 - Petrotoga
mobilis SJ95
Length = 110
Score = 33.9 bits (74), Expect = 2.0
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -1
Query: 241 RILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVH 116
+I+TG V M +TI + D L PKY++F ++ R H
Sbjct: 4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAH 45
>UniRef50_Q14591-2 Cluster: Isoform 2 of Q14591 ; n=2; Homo
sapiens|Rep: Isoform 2 of Q14591 - Homo sapiens (Human)
Length = 423
Score = 33.5 bits (73), Expect = 2.6
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 246 RIETL-PVKGHFLSM*VPSIASRGVLKPRPTSLWYLNGFLLRFTPIPFLRFRK 401
RI+TL ++G L ++ S G L R SL+Y+ GF+L PIP + K
Sbjct: 37 RIQTLLNIEGSTLERNPINVMSVGKLLIRAQSLFYIRGFILERNPIPVINVAK 89
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 475,028,843
Number of Sequences: 1657284
Number of extensions: 9288400
Number of successful extensions: 24257
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 23406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24248
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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