Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_G08
(490 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 23 2.0
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 21 4.5
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 4.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 4.5
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 4.5
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 4.5
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 4.5
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 4.5
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 21 4.5
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 4.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.0
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 6.0
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.0
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 6.0
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 6.0
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 6.0
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 7.9
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 21 7.9
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 21 7.9
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 22.6 bits (46), Expect = 2.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 312 GVLKPRPTSLWYLNGFLLRFTPIPFLRF 395
G L P+PTS+ ++ LL+F P ++F
Sbjct: 69 GALWPQPTSVTKISSTLLKF-PYRSIKF 95
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 21.4 bits (43), Expect = 4.5
Identities = 6/13 (46%), Positives = 7/13 (53%)
Frame = +3
Query: 87 SPRPCKQGDKCTD 125
SP PC+ C D
Sbjct: 111 SPNPCRNNGSCVD 123
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 4.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 211 KMQRTIVIRRDYLHYLPKY--NRFEKRHRNMSVHLSPCLQGRGDW*YCNDRRMQ 56
K QRT R L ++ NR+ R R + + + CL R + +RRM+
Sbjct: 221 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 274
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 4.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 211 KMQRTIVIRRDYLHYLPKY--NRFEKRHRNMSVHLSPCLQGRGDW*YCNDRRMQ 56
K QRT R L ++ NR+ R R + + + CL R + +RRM+
Sbjct: 221 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 274
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.4 bits (43), Expect = 4.5
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +3
Query: 90 PRPCKQGDKCTDM 128
P PC+ G C D+
Sbjct: 228 PNPCQNGGTCHDL 240
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.4 bits (43), Expect = 4.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 211 KMQRTIVIRRDYLHYLPKY--NRFEKRHRNMSVHLSPCLQGRGDW*YCNDRRMQ 56
K QRT R L ++ NR+ R R + + + CL R + +RRM+
Sbjct: 221 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 274
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.4 bits (43), Expect = 4.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 211 KMQRTIVIRRDYLHYLPKY--NRFEKRHRNMSVHLSPCLQGRGDW*YCNDRRMQ 56
K QRT R L ++ NR+ R R + + + CL R + +RRM+
Sbjct: 177 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 230
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 4.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 211 KMQRTIVIRRDYLHYLPKY--NRFEKRHRNMSVHLSPCLQGRGDW*YCNDRRMQ 56
K QRT R L ++ NR+ R R + + + CL R + +RRM+
Sbjct: 221 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 274
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 21.4 bits (43), Expect = 4.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 211 KMQRTIVIRRDYLHYLPKY--NRFEKRHRNMSVHLSPCLQGRGDW*YCNDRRMQ 56
K QRT R L ++ NR+ R R + + + CL R + +RRM+
Sbjct: 9 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 62
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.4 bits (43), Expect = 4.5
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 211 KMQRTIVIRRDYLHYLPKY--NRFEKRHRNMSVHLSPCLQGRGDW*YCNDRRMQ 56
K QRT R L ++ NR+ R R + + + CL R + +RRM+
Sbjct: 221 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 274
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.0
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +3
Query: 336 SLWYLNGFLLRFTPIPFLR 392
SL + ++ R +PIPF++
Sbjct: 264 SLGWWENYISRHSPIPFIK 282
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.0
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +3
Query: 336 SLWYLNGFLLRFTPIPFLR 392
SL + ++ R +PIPF++
Sbjct: 264 SLGWWENYISRHSPIPFIK 282
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.0
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +3
Query: 336 SLWYLNGFLLRFTPIPFLR 392
SL + ++ R +PIPF++
Sbjct: 264 SLGWWENYISRHSPIPFIK 282
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.0
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +3
Query: 336 SLWYLNGFLLRFTPIPFLR 392
SL + ++ R +PIPF++
Sbjct: 264 SLGWWENYISRHSPIPFIK 282
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.0 bits (42), Expect = 6.0
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -1
Query: 157 YNRFEKRHRNMSVHLSPCLQGRGDW*YCNDRRMQTFXQN 41
+NR+ R R + + + CL R + +RRM+ +N
Sbjct: 263 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 301
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.0 bits (42), Expect = 6.0
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -1
Query: 157 YNRFEKRHRNMSVHLSPCLQGRGDW*YCNDRRMQTFXQN 41
+NR+ R R + + + CL R + +RRM+ +N
Sbjct: 265 FNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN 303
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +3
Query: 105 QGDKCTDMFLCRFSNL 152
+GD C D+ C S L
Sbjct: 55 EGDNCRDVIQCTSSGL 70
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 20.6 bits (41), Expect = 7.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -1
Query: 358 KPLRYHKDVGLGFKTPR 308
+P + HK + FK PR
Sbjct: 293 QPSQVHKQTAICFKAPR 309
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 20.6 bits (41), Expect = 7.9
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 104 ARRQMYGHVPVPFLEP 151
A R H PVP+L P
Sbjct: 156 ASRHHVDHQPVPYLTP 171
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,728
Number of Sequences: 336
Number of extensions: 2442
Number of successful extensions: 22
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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