Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_G06
(511 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 122 5e-27
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 111 1e-23
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 109 3e-23
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 108 6e-23
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 106 3e-22
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 95 1e-18
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 90 3e-17
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 81 1e-14
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 81 2e-14
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 70 3e-11
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 70 4e-11
UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648... 67 2e-10
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 63 4e-09
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 59 5e-08
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 59 5e-08
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 57 2e-07
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 56 6e-07
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 48 2e-04
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 38 0.17
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 35 1.2
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 34 1.6
UniRef50_A4CKK3 Cluster: Putative uncharacterized protein; n=1; ... 33 3.8
UniRef50_A3PHB5 Cluster: Secretion protein HlyD family protein; ... 33 3.8
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 33 3.8
UniRef50_A5FF29 Cluster: MATE efflux family protein; n=1; Flavob... 33 5.0
UniRef50_P10394 Cluster: Retrovirus-related Pol polyprotein from... 32 8.7
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 122 bits (294), Expect = 5e-27
Identities = 63/134 (47%), Positives = 74/134 (55%)
Frame = -1
Query: 487 FSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIA 308
F+YGL + QVYDSG++FAP ILDI +DL +F +G+ANVAA+SL IGYPT+AS PHSI
Sbjct: 183 FTYGLKIVQVYDSGSVFAPSILDITEDDLIKQFMSGLANVAAVSLQIGYPTVASVPHSIV 242
Query: 307 NGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
NGFKNLL K F+ DPS F
Sbjct: 243 NGFKNLLAVAVATDITFKEAEQAKAFVADPSAF---AALVPAAQEDKKEDDKAAAAAEES 299
Query: 127 XXXSDDDMGFGLFD 86
SDDDMGFGLFD
Sbjct: 300 EEESDDDMGFGLFD 313
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 111 bits (266), Expect = 1e-23
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Frame = -1
Query: 487 FSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIA 308
FS+GLV++QV+D+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI
Sbjct: 183 FSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSII 242
Query: 307 NGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXX-XXXXXXXXXXXXXXXXXXXXXX 131
NG+K +L +K F+ DPS F
Sbjct: 243 NGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAAAPVAAATTAAPAAAAAPAKVEAKE 302
Query: 130 XXXXSDDDMGFGLFD 86
SD+DMGFGLFD
Sbjct: 303 ESEESDEDMGFGLFD 317
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 109 bits (263), Expect = 3e-23
Identities = 50/134 (37%), Positives = 73/134 (54%)
Frame = -1
Query: 487 FSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIA 308
FSYGL+++QVYD+G++++PE+LDI + L +F GV N+A++ L IGYPT+AS PH+I
Sbjct: 186 FSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTII 245
Query: 307 NGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
NG+K +L +K ++ DP+ F
Sbjct: 246 NGYKRVLAVTVETDYTFPLAEKVKAYLADPTAFAVAAPVAAATEQKSAAPAAKEEAPKED 305
Query: 127 XXXSDDDMGFGLFD 86
SD+DMGFGLFD
Sbjct: 306 SEESDEDMGFGLFD 319
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 108 bits (260), Expect = 6e-23
Identities = 56/135 (41%), Positives = 73/135 (54%)
Frame = -1
Query: 493 RLFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHS 314
R FSYGLVV+ VYD+G++F PE+L++ +DL KF AGV+ + ALSLAI YPT+A+APH
Sbjct: 184 RPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAAPHM 243
Query: 313 IANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXX 134
N +KN+L +KEF+KDP+KF
Sbjct: 244 FLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKF--AVAVAAPVSGESGGAVVAVAVEE 301
Query: 133 XXXXXSDDDMGFGLF 89
SD DMGF LF
Sbjct: 302 EAAEESDGDMGFDLF 316
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 106 bits (255), Expect = 3e-22
Identities = 53/139 (38%), Positives = 74/139 (53%), Gaps = 3/139 (2%)
Frame = -1
Query: 493 RLFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHS 314
R FSYGLVV+ VYD+G++F+PE+LD+ + L KF +G++ V +L+LA+ YPT+A+APH
Sbjct: 183 RPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHM 242
Query: 313 IANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXX 134
N +KN L +KEF+KDPSKF
Sbjct: 243 FINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSAQAGAAAKVE 302
Query: 133 XXXXXSDD---DMGFGLFD 86
SD+ + GFGLFD
Sbjct: 303 EKKEESDEEDYEGGFGLFD 321
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 94.7 bits (225), Expect = 1e-18
Identities = 44/61 (72%), Positives = 54/61 (88%)
Frame = -1
Query: 469 VKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNL 290
++QVY G+IF+P+ILDIKPEDLRAKFQ GVAN+A +SL IGYPT+AS PH+IA GF+NL
Sbjct: 765 IEQVY--GSIFSPDILDIKPEDLRAKFQVGVANLAGVSLEIGYPTLASVPHNIAIGFRNL 822
Query: 289 L 287
L
Sbjct: 823 L 823
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 89.8 bits (213), Expect = 3e-17
Identities = 42/92 (45%), Positives = 58/92 (63%)
Frame = -1
Query: 487 FSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIA 308
FS+GL VK VYD+G++++ E+L + + L KF GV N+AA+SL +G PT ASAPHSI
Sbjct: 193 FSFGLKVKNVYDNGSVYSAEVLKLTNDILLGKFMNGVRNIAAMSLTLGIPTAASAPHSIV 252
Query: 307 NGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSK 212
+GFKNL+ + +KDPSK
Sbjct: 253 SGFKNLVSIAHVVDYTFSQAEGLLAVLKDPSK 284
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 81.0 bits (191), Expect = 1e-14
Identities = 48/134 (35%), Positives = 60/134 (44%)
Frame = -1
Query: 487 FSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIA 308
F+YGL K +YD+G ++P I + EDL KF+ G+ N+AA+SL IGYPT+AS PHS+
Sbjct: 182 FTYGLEPKIIYDAGACYSPSISE---EDLINKFKQGIFNIAAISLEIGYPTVASIPHSVM 238
Query: 307 NGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
N FKNLL K
Sbjct: 239 NAFKNLLAISFETSYTFDAAEKFK-------SAAAAAPVRAAPSAAAPRAAAKKVVVEEK 291
Query: 127 XXXSDDDMGFGLFD 86
SDDDMG GLFD
Sbjct: 292 KEESDDDMGMGLFD 305
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 80.6 bits (190), Expect = 2e-14
Identities = 44/133 (33%), Positives = 60/133 (45%)
Frame = -1
Query: 484 SYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIAN 305
SYG+ V+ VYD G I+ ++LDI ED+ KF GV+NVAALS A G T AS PH
Sbjct: 184 SYGVDVRTVYDDGVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVE 243
Query: 304 GFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXX 125
FKN++ +K+++++P F
Sbjct: 244 AFKNIVALIIDSDYTFPLMKILKKWVENPEAFAAVAAPASAAKADEPKKEEAKKVEEEEE 303
Query: 124 XXSDDDMGFGLFD 86
D MGFG+FD
Sbjct: 304 EEEDGFMGFGMFD 316
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 70.1 bits (164), Expect = 3e-11
Identities = 33/67 (49%), Positives = 45/67 (67%)
Frame = -1
Query: 487 FSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIA 308
FSY L V V+D+G ++ P +LDI E + ++ ++NVA++SL G PT ASAPHSI
Sbjct: 201 FSYKLSVAHVFDNGNVYGPGVLDITSESIIESYKRVISNVASVSLESGIPTRASAPHSIM 260
Query: 307 NGFKNLL 287
FKNLL
Sbjct: 261 RVFKNLL 267
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 69.7 bits (163), Expect = 4e-11
Identities = 32/90 (35%), Positives = 49/90 (54%)
Frame = -1
Query: 487 FSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIA 308
F Y L ++ +YD G ++ P IL I E L KF+ G+ NV L+LA+GYP ASAPH +
Sbjct: 185 FKYTLKIEALYDHGNMYDPSILAITEEVLGEKFRTGLRNVTGLALAVGYPCAASAPHLVG 244
Query: 307 NGFKNLLXXXXXXXXXXXXXXXIKEFIKDP 218
+ FK++ +++ + DP
Sbjct: 245 SAFKDIAAIAIAIEHNMKQIEDLQKLLSDP 274
>UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648;
n=12; Gnathostomata|Rep: Uncharacterized protein
ENSP00000366648 - Homo sapiens (Human)
Length = 99
Score = 67.3 bits (157), Expect = 2e-10
Identities = 36/99 (36%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Frame = -1
Query: 379 VANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXIKEFIKDPSKFXXX 200
V NVA++ L IGYPT+AS PHSI NG+K +L +K F+ DPS F
Sbjct: 1 VRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAA 60
Query: 199 X-XXXXXXXXXXXXXXXXXXXXXXXXXXSDDDMGFGLFD 86
SD+DMGFGLFD
Sbjct: 61 APVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD 99
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 62.9 bits (146), Expect = 4e-09
Identities = 29/67 (43%), Positives = 40/67 (59%)
Frame = -1
Query: 487 FSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIA 308
F YG V+ VYD+G ++ + LD+ D+ KFQ GV A+SLA PT A+ PH +
Sbjct: 190 FKYGAVIDVVYDNGIVYDAKALDLTESDIVKKFQEGVQAATAISLAANLPTEAACPHLML 249
Query: 307 NGFKNLL 287
N F+ LL
Sbjct: 250 NAFQALL 256
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 59.3 bits (137), Expect = 5e-08
Identities = 29/66 (43%), Positives = 36/66 (54%)
Frame = -1
Query: 487 FSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIA 308
FSYG+ YD+G I E+L I P + F +AA+SLA GY T S PH I
Sbjct: 201 FSYGMKCFSDYDNGEILTEEVLSISPSVILDAFAQNTLRIAAVSLATGYVTAPSVPHFIQ 260
Query: 307 NGFKNL 290
N FK+L
Sbjct: 261 NAFKDL 266
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 59.3 bits (137), Expect = 5e-08
Identities = 29/66 (43%), Positives = 42/66 (63%)
Frame = -1
Query: 487 FSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIA 308
F YG+ V YD+G+I + + + D+ AKFQ V NV+A+SL G+ ASAP+ +A
Sbjct: 201 FLYGMEVLACYDNGSILNKQQVSVNLNDIVAKFQQNVRNVSAISLQNGWVNEASAPYLLA 260
Query: 307 NGFKNL 290
N FK+L
Sbjct: 261 NAFKDL 266
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 57.2 bits (132), Expect = 2e-07
Identities = 29/67 (43%), Positives = 39/67 (58%)
Frame = -1
Query: 487 FSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIA 308
F Y + V+ V+D G +F E L I + + G++NVAALSL G PT A+ PH I
Sbjct: 190 FYYQVEVQSVWDRGMLFLREDLSITDDVVEKYLLEGISNVAALSLGAGIPTAATLPHMIM 249
Query: 307 NGFKNLL 287
+ FK LL
Sbjct: 250 DAFKTLL 256
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 55.6 bits (128), Expect = 6e-07
Identities = 24/67 (35%), Positives = 40/67 (59%)
Frame = -1
Query: 487 FSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIA 308
F Y + + Q+Y+ G I+ ++DI ED+ + ++ VAA SL G T AS P+++
Sbjct: 205 FCYKMTMHQIYEDGVIYDSSLIDIGEEDIFTSLRNAISTVAAASLGAGVITQASMPYNVR 264
Query: 307 NGFKNLL 287
N FK++L
Sbjct: 265 NAFKDIL 271
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = -1
Query: 478 GLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANG 302
GL ++ V+ G +F PE L+I ++ RA Q+ A+ LS+ YPT +AP IA G
Sbjct: 190 GLDLRGVFSEGVLFTPEELEIDVDEYRADIQSAAASARNLSVNAAYPTERTAPDLIAKG 248
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 37.5 bits (83), Expect = 0.17
Identities = 31/137 (22%), Positives = 58/137 (42%)
Frame = +2
Query: 77 QALVEKTKAHVVIAXXXXXXXXXXXXXXXXXXXXXXXXXXXNCSEL*WVLNELLDGGSFF 256
+ L+E+T+ HVVI S WVLN +L +F+
Sbjct: 11 RCLIEQTETHVVIRFFFFFSWSFFSSSFGRAGSSSNWGSR---SVSIWVLNSVLQFFNFW 67
Query: 257 KLNLCDSSDGQKVLETIGNGMRG*SNSWVSNSQRKSSYISNSSLELGTEIFWFDVQNFRC 436
+ SD Q+VL + + WV++SQ +S +S E+ + D+Q+
Sbjct: 68 VDVVSSDSDSQQVLVVVDQRVTDRWQGWVTSSQGNTSNGVDSRDEVRDQFIVSDIQDGSW 127
Query: 437 KNSSRIIYLLNNKTI*E 487
++ + ++ L + +T+ E
Sbjct: 128 EDLTVVVNLNDGQTVGE 144
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 34.7 bits (76), Expect = 1.2
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -1
Query: 478 GLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGF 299
GL ++ YD GTI+ PE+L + + N LS+ YPT A+ +A +
Sbjct: 189 GLDLRAAYDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAYPTGATIGTLLAKAY 248
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 34.3 bits (75), Expect = 1.6
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = -1
Query: 478 GLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGF 299
GL V VY+ G ++ P++L I ++ Q + L++ I YPT + I F
Sbjct: 188 GLDVLAVYEDGIVYTPDVLAIDEQEYIDMLQKAYMHAFNLAVNIAYPTPETIEAIIQKAF 247
Query: 298 KN 293
N
Sbjct: 248 LN 249
>UniRef50_A4CKK3 Cluster: Putative uncharacterized protein; n=1;
Robiginitalea biformata HTCC2501|Rep: Putative
uncharacterized protein - Robiginitalea biformata
HTCC2501
Length = 468
Score = 33.1 bits (72), Expect = 3.8
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 294 FLKPLAMECGAEAIVGYPIAKERAATLATPAWNLARRSSGLMSRISGAK 440
FL L E GAE + GY IA PAW ++ ++ L+ + GA+
Sbjct: 280 FLMRLMSEFGAEILAGYTIAIRVLMFTLMPAWGMSNAAATLVGQNLGAR 328
>UniRef50_A3PHB5 Cluster: Secretion protein HlyD family protein;
n=4; Rhodobacteraceae|Rep: Secretion protein HlyD family
protein - Rhodobacter sphaeroides (strain ATCC 17029 /
ATH 2.4.9)
Length = 396
Score = 33.1 bits (72), Expect = 3.8
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Frame = -1
Query: 493 RLFSYGLVVKQVYDSGT-----IFAPEILDI--KPEDLRAKFQAGVANVAALSLAIGYPT 335
R FS GLV + G+ I +P +L I +PEDL +F AG VA +L +G P
Sbjct: 219 RSFSDGLVTQLALSVGSPAATLILSPAMLIIPDRPEDLPLRFTAGFNQVARSTLYVGMPA 278
Query: 334 IASAPHSIANGFKN 293
+ +I F++
Sbjct: 279 EIACNTNINLSFRD 292
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 33.1 bits (72), Expect = 3.8
Identities = 18/63 (28%), Positives = 27/63 (42%)
Frame = -1
Query: 475 LVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFK 296
L +K Y G + E L + E R+ N L++ I YPT +I+ FK
Sbjct: 192 LKIKVAYHEGLVIPAESLKLDLEGYRSNITEAYRNAFTLAVEIAYPTPDVLKFTISKVFK 251
Query: 295 NLL 287
N +
Sbjct: 252 NAI 254
>UniRef50_A5FF29 Cluster: MATE efflux family protein; n=1;
Flavobacterium johnsoniae UW101|Rep: MATE efflux family
protein - Flavobacterium johnsoniae UW101
Length = 468
Score = 32.7 bits (71), Expect = 5.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 294 FLKPLAMECGAEAIVGYPIAKERAATLATPAWNLARRSSGLMSRISGAK 440
F+ + G A+ GY IA+ A+ + TPAW + + L + GA+
Sbjct: 280 FMIKIVSHFGGNALAGYIIAQRVASIVTTPAWGIGNAAGILTGQNLGAQ 328
>UniRef50_P10394 Cluster: Retrovirus-related Pol polyprotein from
transposon 412 [Includes: Protease (EC 3.4.23.-); Reverse
transcriptase (EC 2.7.7.49); Endonuclease]; n=9;
Drosophila melanogaster|Rep: Retrovirus-related Pol
polyprotein from transposon 412 [Includes: Protease (EC
3.4.23.-); Reverse transcriptase (EC 2.7.7.49);
Endonuclease] - Drosophila melanogaster (Fruit fly)
Length = 1237
Score = 31.9 bits (69), Expect = 8.7
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = -1
Query: 508 MNSAGRLFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIA 329
+N + LF +G + YD G ++ ILD+ R + QAG+ +++ + +A P
Sbjct: 799 LNDSICLFKHGKKIIARYDVGDLYTNGILDLDQFLQRLELQAGIYDISQIKMA---PWKK 855
Query: 328 SAPHSIANGFKNL 290
H + FKN+
Sbjct: 856 IFEHVSIDKFKNM 868
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 418,589,033
Number of Sequences: 1657284
Number of extensions: 6898787
Number of successful extensions: 18134
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 17763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18126
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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