Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_G06
         (511 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   2.6  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   6.0  
AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.          23   7.9  
AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.          23   7.9  
AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.          23   7.9  

>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -3

Query: 107 HGLWSFRLEPVRSNSLSQA-AGVDVHMAAGLGLH 9
           HG W++RL P  +  +S+   GVD  ++  L  H
Sbjct: 863 HGRWTYRLIPDVNRWISRRFGGVDFFLSQFLSSH 896


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 178 RTVPPRQQLQRTLM 219
           RT+PP +QLQ  L+
Sbjct: 324 RTIPPEEQLQTELL 337


>AY344819-1|AAR02430.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 468 LSRYMILELFLHLKFWTSNQKISVPS 391
           L RY++L  FL++ F+TS  +   PS
Sbjct: 4   LRRYILL--FLNICFYTSGAEAKAPS 27


>AY344818-1|AAR02429.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 468 LSRYMILELFLHLKFWTSNQKISVPS 391
           L RY++L  FL++ F+TS  +   PS
Sbjct: 4   LRRYILL--FLNICFYTSGAEAKAPS 27


>AY344817-1|AAR02428.1|  257|Anopheles gambiae CP5039 protein.
          Length = 257

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -2

Query: 468 LSRYMILELFLHLKFWTSNQKISVPS 391
           L RY++L  FL++ F+TS  +   PS
Sbjct: 4   LRRYILL--FLNICFYTSGAEAKAPS 27


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,060
Number of Sequences: 2352
Number of extensions: 6732
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46091631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)