Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_G01
         (780 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   6.3  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   6.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   8.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.4  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   8.4  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   8.4  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 575 IQRPFCRWTHQIFLIRIVCL 634
           ++R +  W+  + + RIVCL
Sbjct: 315 LERLYFYWSFALLITRIVCL 334


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 327 FSTLAKAASLILGSG*GPMLATVQTLL 407
           +STLA A +   G    P +++ +TLL
Sbjct: 268 YSTLASAVASANGPSQDPSISSTETLL 294


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +1

Query: 55  RNSFSSWPL*FREENVKIILENFSE 129
           RN+   + + FR  N  I+++NF++
Sbjct: 395 RNNRDEYNVCFRPRNNSILIKNFND 419


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +2

Query: 608 IFLIRIVCLLPEIRINISQPFSVLNXVM 691
           +FL ++    PE+R+NI      +N V+
Sbjct: 370 LFLTQLKDECPEVRLNIISNLDCVNEVI 397


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 641 EIRINISQPFSVLNXVMP 694
           E R+ +S P +VLN  MP
Sbjct: 132 ESRVMMSPPGNVLNLTMP 149


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 641 EIRINISQPFSVLNXVMP 694
           E R+ +S P +VLN  MP
Sbjct: 132 ESRVMMSPPGNVLNLTMP 149


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,124
Number of Sequences: 336
Number of extensions: 2903
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)