Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F24
(684 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 366 e-100
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 204 2e-51
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 174 1e-42
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 164 2e-39
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 152 9e-36
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 146 6e-34
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 145 8e-34
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 126 4e-28
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 124 3e-27
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 114 2e-24
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 110 3e-23
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 107 2e-22
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 105 1e-21
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 98 2e-19
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 97 5e-19
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 89 9e-17
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 88 2e-16
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 83 8e-15
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 77 4e-13
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 77 4e-13
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 74 3e-12
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 71 2e-11
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 67 4e-10
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 64 3e-09
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 61 3e-08
UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7... 55 2e-06
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 48 2e-04
UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillar... 44 0.005
UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5; Archae... 41 0.032
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 40 0.056
UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8; Euryar... 40 0.075
UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole ge... 39 0.099
UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14; Archa... 38 0.23
UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5; Euteleos... 36 0.70
UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep: S... 34 3.7
UniRef50_Q1LEC7 Cluster: ThiamineS; n=5; Proteobacteria|Rep: Thi... 34 3.7
UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_A6GK83 Cluster: Translation initiation factor IF-2; n=1... 33 4.9
UniRef50_A5C2Z1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_Q7SHY6 Cluster: Predicted protein; n=1; Neurospora cras... 33 4.9
UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:... 33 4.9
UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2; Lactoc... 33 6.5
UniRef50_A7AS85 Cluster: Ribosomal protein L14, putative; n=1; B... 33 8.6
UniRef50_A7E738 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 8.6
UniRef50_A1CF41 Cluster: Translation factor pelota, putative; n=... 33 8.6
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 366 bits (900), Expect = e-100
Identities = 185/217 (85%), Positives = 187/217 (86%), Gaps = 2/217 (0%)
Frame = -2
Query: 683 KYKFIGXXXXXXXXXXKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPF 504
KYKFIG KLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPF
Sbjct: 52 KYKFIGKKNPKPEKPKKLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPF 111
Query: 503 SKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRY 324
SKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRY
Sbjct: 112 SKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRY 171
Query: 323 VICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTD 144
VI TSTRISLGNFKLPKHFNDDYF KEGDDIFATKKEKYVPSEQRKTD
Sbjct: 172 VIGTSTRISLGNFKLPKHFNDDYFKKNKKCVKRTVKRKEGDDIFATKKEKYVPSEQRKTD 231
Query: 143 QKTVDEAVIKAIGARPDKKVLRGYLQG--GLRTPLQP 39
QKTVDEAVIKAIGARPDKKVLRGYL+ GLR+ P
Sbjct: 232 QKTVDEAVIKAIGARPDKKVLRGYLKAAFGLRSSQYP 268
Score = 40.7 bits (91), Expect = 0.032
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -3
Query: 97 PTRRCSADTXKAAFGLRSSQYPHRLRF 17
P ++ KAAFGLRSSQYPHRLRF
Sbjct: 247 PDKKVLRGYLKAAFGLRSSQYPHRLRF 273
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 204 bits (498), Expect = 2e-51
Identities = 104/185 (56%), Positives = 125/185 (67%)
Frame = -2
Query: 620 VKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLA 441
VK+IGG KNGG RTV LK+ K+ YPT+ ++ FS+H R R NL GTV ILLA
Sbjct: 65 VKKIGGPKNGGERTVFLKKSKASYPTKTFVKKRPSKANFSEHKRNTRRNLTPGTVLILLA 124
Query: 440 GRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFND 261
GRH GKRVVL+ +L SGLLLVTGPFA NSCPLRR+ QRYVI TS+++ LG FK+P+H ND
Sbjct: 125 GRHQGKRVVLLKVLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLND 184
Query: 260 DYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVL 81
YF DIFA KKE++VP+EQRK DQK VD A++K I A P+ K
Sbjct: 185 AYFRRLKAKKDKKTGEA---DIFAAKKERFVPNEQRKKDQKEVDAALLKVIKAHPEGKFF 241
Query: 80 RGYLQ 66
YLQ
Sbjct: 242 AKYLQ 246
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 174 bits (424), Expect = 1e-42
Identities = 93/191 (48%), Positives = 122/191 (63%), Gaps = 2/191 (1%)
Frame = -2
Query: 632 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGT 459
L V K +GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT
Sbjct: 89 LATVTKPVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGT 148
Query: 458 VCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKL 279
+ I+L GRH GKRVV + L SGLLLVTGP N PLRR Q++VI TST+I + N K+
Sbjct: 149 ILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKI 208
Query: 278 PKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGAR 99
PKH D YF +EG +IF T+KEKY +EQRK DQK VD ++ I A
Sbjct: 209 PKHLTDAYF---KKKKLRKPRHQEG-EIFDTEKEKYEITEQRKIDQKAVDSQILPKIKAI 264
Query: 98 PDKKVLRGYLQ 66
P L+GYL+
Sbjct: 265 PQ---LQGYLR 272
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 164 bits (399), Expect = 2e-39
Identities = 93/198 (46%), Positives = 124/198 (62%), Gaps = 2/198 (1%)
Frame = -2
Query: 626 VVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCIL 447
V+ K+IGG+KNGGTR V ++ FYP + + +K+ +IR +L+ GT+ IL
Sbjct: 44 VIEKKIGGDKNGGTRLVSTRKPPQFYPINSRQKRFHRRLVNNKNPPKIRKSLQPGTILIL 103
Query: 446 LAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHF 267
LAG + GKRVVL+ L SGLLLV+GP N PLRR+ Q+ VI TSTRI + N K+P+H
Sbjct: 104 LAGVNRGKRVVLLKALKSGLLLVSGPLKVNRVPLRRVHQKLVIATSTRIDISNVKVPEHI 163
Query: 266 NDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKK 87
ND YF KEG DIFA+K E+Y P+EQRK DQ VD ++KAI A+PD
Sbjct: 164 NDTYF----RRHKVKKEAKEG-DIFASKPERYTPTEQRKKDQAEVDVQLLKAIKAQPDAA 218
Query: 86 VLRGYLQG--GLRTPLQP 39
+L YL+ GL+ + P
Sbjct: 219 MLVKYLRTIFGLKNNMIP 236
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 152 bits (368), Expect = 9e-36
Identities = 87/200 (43%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
Frame = -2
Query: 626 VVVKQIGGEKNGGTRTVPLKRRKSFYPTQE--KIRASSGGRPFSKHVRRIRPNLKIGTVC 453
V VK++ GEKNGG R +PLK+ + YPT++ + + +S +P S+ +R + GTV
Sbjct: 67 VTVKRVKGEKNGGKRVLPLKKERRSYPTEDSPQHKRTSHMKPSSRTRVALRKRITPGTVL 126
Query: 452 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPK 273
ILLAG H GKRVV + L +GLL VTGP+ N CPLRRI Q YVI TST++ L KLP+
Sbjct: 127 ILLAGPHRGKRVVFLKQLKTGLLPVTGPYGVNGCPLRRINQIYVIATSTKLDLSKVKLPE 186
Query: 272 HFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 93
+D YF EG +IF K +++V SE+ K Q VD+ V++A+ A P+
Sbjct: 187 GLDDRYF--KRNKGPKRGRKDEG-EIFEAKPQEHVVSEEHKKTQAEVDKQVLEAVKAHPE 243
Query: 92 KKVLRGYLQG--GLRTPLQP 39
KK+L YL LR + P
Sbjct: 244 KKMLLHYLAATFSLRNRMYP 263
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 146 bits (353), Expect = 6e-34
Identities = 81/177 (45%), Positives = 104/177 (58%)
Frame = -2
Query: 617 KQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAG 438
K IGG+KNGG R VP++R +YPT++ +R R + ++R ++ GTV ILLAG
Sbjct: 54 KDIGGDKNGGKRVVPVQRESRYYPTED-VRRRLANRK-KPGMAKLRSSITPGTVLILLAG 111
Query: 437 RHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDD 258
H GKRVV + L SGLLLVTGPF N PLRRIPQ YVI TST I + + KLP+H
Sbjct: 112 AHRGKRVVFLKQLNSGLLLVTGPFKINGVPLRRIPQSYVIATSTHIDVSDVKLPEH---- 167
Query: 257 YFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKK 87
F K +D+F E+ PSEQR DQK VD+ ++ I A P+ K
Sbjct: 168 AFADESYFKGEPKKKKRSEDMFEEAAEEKKPSEQRIADQKAVDDQILPKISAVPNMK 224
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 145 bits (352), Expect = 8e-34
Identities = 79/173 (45%), Positives = 104/173 (60%), Gaps = 3/173 (1%)
Frame = -2
Query: 575 PLKRRKSFYPTQE---KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVG 405
P R Y TQ+ K+R + FS HVR+IR +++ GTV ILLAG H GKRV+ +
Sbjct: 55 PKTRFPRSYVTQQGKRKLRLRRA-KCFSNHVRKIRSSIQPGTVLILLAGPHKGKRVIFLK 113
Query: 404 ILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXX 225
L SGLLLVTGPF +N PLRR+ Q YVI TSTRI + F +PKH +D+YF
Sbjct: 114 ALKSGLLLVTGPFKYNGVPLRRVNQCYVIATSTRIDISKFDVPKHIDDEYF----RRVDL 169
Query: 224 XXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLQ 66
+ +F+T+ +KY S+ RK DQK VD + AI + PD K+L YL+
Sbjct: 170 KESKTDAGKLFSTETKKYTVSDIRKEDQKLVDNQIRAAIKSHPDSKILHAYLR 222
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 126 bits (305), Expect = 4e-28
Identities = 69/140 (49%), Positives = 86/140 (61%), Gaps = 1/140 (0%)
Frame = -2
Query: 485 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVICTS 309
+R L GTV I+LAGRH GKRVV + LP SGLLLVTGP N PLRRI Q +VI TS
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATS 126
Query: 308 TRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVD 129
++++ K+P+H ND+YF G +IFA+ K +Y SEQRK D KTVD
Sbjct: 127 LKVNVSGVKIPEHINDEYFKRKSTAQKT------GKNIFASGKTEYTVSEQRKKDIKTVD 180
Query: 128 EAVIKAIGARPDKKVLRGYL 69
++ AI P+ K L GYL
Sbjct: 181 APILAAIKKHPEHKFLFGYL 200
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 124 bits (298), Expect = 3e-27
Identities = 66/132 (50%), Positives = 81/132 (61%)
Frame = -2
Query: 506 FSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQR 327
F+ H RRIR ++ G V ILLAGRH KRVV + L SGLLLVTGPF +N PLRR+ QR
Sbjct: 86 FADHRRRIRKSITPGKVLILLAGRHRAKRVVFLKSLASGLLLVTGPFKYNGVPLRRVNQR 145
Query: 326 YVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKT 147
YVI T TRI + N K+P ND++F D IFA +++KY S+ RK
Sbjct: 146 YVIATKTRIKIKNIKIPSQLNDEFFRRQDLKTKKSV-----DKIFAEEEKKYTVSDDRKK 200
Query: 146 DQKTVDEAVIKA 111
QK VD A+I A
Sbjct: 201 LQKQVDTALIAA 212
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 114 bits (275), Expect = 2e-24
Identities = 70/167 (41%), Positives = 95/167 (56%)
Frame = -2
Query: 575 PLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILP 396
P+++ FYP ++ ++ R +K + +R ++ GTV I+LAGR GKRVV + L
Sbjct: 57 PVEKPPKFYPAED-VKKPLPNRRTAKPAK-LRASITPGTVLIILAGRFKGKRVVFLKQLA 114
Query: 395 SGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 216
SGLLLVTGPF N PLRR+ Q YVI TST++ + L K F+D YF
Sbjct: 115 SGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDK-FDDKYF---GKVAEKKKK 170
Query: 215 XKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRG 75
EG+ A K+EK + +K DQK VD A+IKAI A P+ K G
Sbjct: 171 KTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEAVPELKTYLG 217
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 110 bits (265), Expect = 3e-23
Identities = 73/163 (44%), Positives = 94/163 (57%), Gaps = 3/163 (1%)
Frame = -2
Query: 554 FYPTQE-KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLV 378
FYP + K R S +P + ++R ++ GTV ILLAGR GKRVV + L SGLLLV
Sbjct: 53 FYPADDVKPRQPSTRKP---NPTKLRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLV 109
Query: 377 TGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDD 198
TGPF N P+RR+ Q YVI TST++ + + K F+D YF EG +
Sbjct: 110 TGPFKINGVPIRRVNQPYVIATSTKVDISGVNVEK-FDDKYF---SRDKKQKAKKTEG-E 164
Query: 197 IFATKKE--KYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRG 75
+F T+KE K +P E +K DQK VD +IKAI A PD K G
Sbjct: 165 LFETEKEATKNLP-EFKKEDQKVVDAELIKAIEAVPDLKTYLG 206
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 107 bits (258), Expect = 2e-22
Identities = 69/189 (36%), Positives = 96/189 (50%)
Frame = -2
Query: 632 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 453
+ ++ K IGG KNGG R VP K+ +YP +K + K + +RP++K GT+
Sbjct: 20 IKMIKKPIGGAKNGGYRLVPEKKGPKWYPADDKKTPVPSRKNVHKPTK-LRPSIKSGTIV 78
Query: 452 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPK 273
ILLAG G RVV++ L SG LLVTGP+A N PL R+ QRYVI TST I + + K
Sbjct: 79 ILLAGVFRGSRVVVLKQLDSGQLLVTGPYAVNRIPLTRVDQRYVIATSTSIDVSKVDV-K 137
Query: 272 HFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPD 93
++ YF D ++K E R DQK +D ++ I P
Sbjct: 138 KIDNAYFRKPQKKKKTDVMEV---DTAKKDEQKTKAIEARIADQKAIDAVLLPVIEKEP- 193
Query: 92 KKVLRGYLQ 66
+L YL+
Sbjct: 194 --LLSSYLK 200
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 105 bits (251), Expect = 1e-21
Identities = 62/161 (38%), Positives = 86/161 (53%)
Frame = -2
Query: 590 GTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVL 411
G R + K K +IR+++ + K +R ++ GTV I+LAGR AGKRVV
Sbjct: 54 GKRVIAAKASKFAPSIPAEIRSTAAKKVQQKVA--LRKSITPGTVLIILAGRFAGKRVVA 111
Query: 410 VGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXX 231
+ L SGL+L+TGPF N PLRRI QRYVI TST+I + + K+ ND YF
Sbjct: 112 LKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKST 171
Query: 230 XXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAI 108
D+ K EK ++ R DQK+VD A++ +
Sbjct: 172 TKSEGAFFSDE---KKAEKKKIADSRVADQKSVDSAILAVL 209
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 97.9 bits (233), Expect = 2e-19
Identities = 56/145 (38%), Positives = 82/145 (56%)
Frame = -2
Query: 530 RASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSC 351
R S R S ++R +L+ G VCILLAG + GKRVV++ LPSGL++VTGP+A N
Sbjct: 20 RKYSSRRKASVVAPKLRSSLQPGVVCILLAGPYKGKRVVMLKALPSGLVVVTGPYALNGV 79
Query: 350 PLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKY 171
P+RR+ Y+I TST++ + + K F D+YF D TK +
Sbjct: 80 PVRRVNPAYIIATSTKVDVSKADVSK-FTDEYFKVDRSKLKKSKDAFM-DQGEETKVNRV 137
Query: 170 VPSEQRKTDQKTVDEAVIKAIGARP 96
V SE+RK Q+ +D ++I +I + P
Sbjct: 138 V-SEERKKTQQALDASIIPSIQSNP 161
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 96.7 bits (230), Expect = 5e-19
Identities = 66/188 (35%), Positives = 97/188 (51%), Gaps = 10/188 (5%)
Frame = -2
Query: 629 TVVVKQIGGEKN--GGTRTVPLKRRKS--FYPTQEKIRASSGGRPFSKHVRRIRPNLKIG 462
T+ K +G K G R +P +K+ +YP ++ + + + H ++RP+L+ G
Sbjct: 4 TLDSKSVGQTKKFGKGERVIPHPSQKAQKWYPADDEPQPKKARK--TAHPTKLRPSLQPG 61
Query: 461 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNF- 285
T+ ILLAGR GKRV+L+ L G+LLVTGPF N PLRR+ RYVI TS+ + L
Sbjct: 62 TILILLAGRFRGKRVILLKHLGQGVLLVTGPFKLNGVPLRRVNARYVIATSSTVDLNGVD 121
Query: 284 --KLPKHFNDDYFXXXXXXXXXXXXXKEGDDIF---ATKKEKYVPSEQRKTDQKTVDEAV 120
L K +YF K+G++ F K EK + R DQK +D+A+
Sbjct: 122 QKTLEKVSQPEYF------TREKAEQKKGEEAFFKQGEKPEKKKVASARAADQKAIDQAL 175
Query: 119 IKAIGARP 96
+ I P
Sbjct: 176 LATIKKEP 183
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 89.0 bits (211), Expect = 9e-17
Identities = 60/167 (35%), Positives = 92/167 (55%)
Frame = -2
Query: 569 KRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSG 390
++ +YP+++ + A R ++ +++R +L GTV ILLAGR GKRVV + L
Sbjct: 4 QKAPKWYPSED-VAALKKTRKAARP-QKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDN 61
Query: 389 LLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXK 210
LL++GPF N PLRR+ RYVI TST++S+ + K FN +YF
Sbjct: 62 TLLISGPFKVNGVPLRRVNARYVIATSTKVSVEGVNVEK-FNVEYFAKEKLTKKEKKEA- 119
Query: 209 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYL 69
++F ++ K + +E R DQK VD+A+I I P +L+ YL
Sbjct: 120 ---NLFPEQQNKEIKAE-RVEDQKVVDKALIAEIKKTP---LLKQYL 159
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 87.8 bits (208), Expect = 2e-16
Identities = 48/93 (51%), Positives = 61/93 (65%)
Frame = -2
Query: 578 VPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGIL 399
V L RRK+ K + GR ++ V ++R +LK G V ILL G + GKRVVL+ +L
Sbjct: 12 VKLNRRKTVVTRLGKTKVV--GRKYAS-VPKVRESLKPGAVLILLTGSYKGKRVVLLKVL 68
Query: 398 PSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRI 300
SGLLLVTGPF+FN PLRR+ RYVI TST +
Sbjct: 69 KSGLLLVTGPFSFNGVPLRRVNSRYVIATSTNV 101
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 82.6 bits (195), Expect = 8e-15
Identities = 44/108 (40%), Positives = 61/108 (56%)
Frame = -2
Query: 389 LLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXK 210
L GPF+ N P+RRI Q++V+ TST+I + K+P DDYF K
Sbjct: 10 LFTFLGPFSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYF------KRTKYFGK 63
Query: 209 EGDDIFATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLQ 66
E DIF K++Y ++ RK DQKT+D AV+ +I D K+L GYL+
Sbjct: 64 EKKDIFEQGKQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLLAGYLR 111
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 77.0 bits (181), Expect = 4e-13
Identities = 54/145 (37%), Positives = 73/145 (50%), Gaps = 3/145 (2%)
Frame = -2
Query: 533 IRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNS 354
+R RP + +R+I P G V ILL+GR GKRVV + L SGLLLVTGPF N
Sbjct: 44 VRKRKAPRPAT--LRKIVP----GQVLILLSGRFQGKRVVFLKQLKSGLLLVTGPFKING 97
Query: 353 CPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX---XKEGDDIFATK 183
PL+R+ YVI TST++ + NDDYF K G+ +
Sbjct: 98 VPLKRVNSAYVIPTSTKVDVTGVN-ANQINDDYFKRTQAQRRKNEQGFWAKRGELTVEQQ 156
Query: 182 KEKYVPSEQRKTDQKTVDEAVIKAI 108
+ + ++ QK+VD A+I AI
Sbjct: 157 TAEKTRLDGKRNTQKSVDAALITAI 181
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 77.0 bits (181), Expect = 4e-13
Identities = 41/75 (54%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Frame = -2
Query: 512 RPFSKHVRRIRPNLKI--GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRR 339
RP K +R P + GTV ILLAGR GKRVVL+ L G+LLVTGPF N PLRR
Sbjct: 24 RPVRKTIRPWSPRSTLVPGTVLILLAGRFRGKRVVLLKALDQGVLLVTGPFKINGVPLRR 83
Query: 338 IPQRYVICTSTRISL 294
+ RYVI TS ++ L
Sbjct: 84 VNARYVIATSQKVDL 98
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 74.1 bits (174), Expect = 3e-12
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Frame = -2
Query: 623 VVKQIGGEKNGGTRTVPLKRRKSFYPTQEK--IRASSGGRPFS---KHV--RRIRPNLKI 465
VV G +KN V ++K P + K I GR + K V R++R ++++
Sbjct: 17 VVPATGDKKNALKHYVIKGQKKILTPVRAKKTISKKHYGRKLASKKKFVVQRKMRSSIQV 76
Query: 464 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRI 300
G V I+L G+H GKR ++ +L SGLL V GP+ N PL+R+ RY+I TST I
Sbjct: 77 GKVAIILTGKHMGKRCIIAKVLKSGLLAVVGPYEVNGVPLKRVDPRYLIVTSTNI 131
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/70 (52%), Positives = 43/70 (61%)
Frame = -2
Query: 461 TVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFK 282
TV I+L GRH GKRVV + L SGLLLVTGP A N PL R+ Q VI T T++ + K
Sbjct: 13 TVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLALNRVPLCRMHQSVVISTFTKVDICKVK 72
Query: 281 LPKHFNDDYF 252
KH D F
Sbjct: 73 TSKHLTDASF 82
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 66.9 bits (156), Expect = 4e-10
Identities = 55/172 (31%), Positives = 83/172 (48%)
Frame = -2
Query: 632 LTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVC 453
+ V+K + G+KNGGT V L++ K + + + + S P KH + + N TV
Sbjct: 86 VATVIKTVSGDKNGGTGVVKLQKMKMYLGSCKAMAKS----PAFKHEKAVC-NSTPETVL 140
Query: 452 ILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPK 273
I++ G+H +RVV + L G LL+TGP A N L R Q+ V+ TST I+
Sbjct: 141 IIITGQH--RRVVFLKQLSRGFLLITGPLALNLVLLYRTHQKSVVITSTTINTQ------ 192
Query: 272 HFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVDEAVI 117
D YF + IF +K+KY +Q K D KT+D ++
Sbjct: 193 --TDVYF----KMKQLHKPRHQQGKIFDMEKDKY-GIKQCKADHKTLDSQIL 237
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 64.1 bits (149), Expect = 3e-09
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 11/151 (7%)
Frame = -2
Query: 485 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVICTS 309
+R + G + I+LAGR G+R V++ LP +G L+V+GP +N P+RRI RYVI TS
Sbjct: 29 LRKSCAPGAIAIILAGRFRGRRAVILKQLPHNGPLVVSGPMKYNGVPIRRIDSRYVIATS 88
Query: 308 TRISLGN----------FKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSE 159
T + + + F+ PK ++ + +K + S+
Sbjct: 89 TTVDISSVDTAPITAEVFQRPKAEKPTKSEGDFMGDKQKAKAEKAAKKTSKAGKKTLVSD 148
Query: 158 QRKTDQKTVDEAVIKAIGARPDKKVLRGYLQ 66
R QK +D A+I AI K GYL+
Sbjct: 149 ARAQLQKKIDAALIAAIKKDAQGKEKAGYLR 179
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 60.9 bits (141), Expect = 3e-08
Identities = 32/75 (42%), Positives = 41/75 (54%)
Frame = -2
Query: 425 KRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISLGNFKLPKHFNDDYFXX 246
KRVV + L SGLLL+TG F N PLRR+ Q YVI TST++ + + K F+D YF
Sbjct: 156 KRVVFLKQLSSGLLLITGSFKINGVPLRRVNQAYVIATSTKVDIPKVNVEK-FDDKYFAK 214
Query: 245 XXXXXXXXXXXKEGD 201
+GD
Sbjct: 215 KVQKKRRSWALDKGD 229
>UniRef50_A2EBD1 Cluster: 60S ribosomal protein L6, putative; n=7;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 151
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/63 (42%), Positives = 39/63 (61%)
Frame = -2
Query: 482 RPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTR 303
RP+LK+GTV I++ G H GKR V+V +G++ + GP P+ I Q Y+I TST
Sbjct: 53 RPSLKVGTVVIVVGGEHQGKRAVVVADQGAGIVKIAGPVV----PVNEISQDYLIATSTS 108
Query: 302 ISL 294
I +
Sbjct: 109 IEV 111
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 48.4 bits (110), Expect = 2e-04
Identities = 31/82 (37%), Positives = 45/82 (54%)
Frame = -2
Query: 539 EKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAF 360
EK +A + +P VRR +L G V ++L G A +RVV + L + L GP +
Sbjct: 10 EKYKARTARKP---RVRRT--DLVKGMVVVVLEGVFASRRVVYLKGLEDNIALCAGPKSI 64
Query: 359 NSCPLRRIPQRYVICTSTRISL 294
N PL RI +RY++ TST + L
Sbjct: 65 NGIPLFRIDERYLLATSTVLDL 86
>UniRef50_Q98RL7 Cluster: 60S ribosomal protein L6B; n=1; Guillardia
theta|Rep: 60S ribosomal protein L6B - Guillardia theta
(Cryptomonas phi)
Length = 169
Score = 43.6 bits (98), Expect = 0.005
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = -2
Query: 476 NLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRIS 297
+ KIG + I+ + GK+ V +G G LL++G FN +I +YV+ + +
Sbjct: 41 DFKIGDILIIKKRNNYGKKCVFLGHTDDGNLLLSGIMKFNGIGYLKIHWKYVVKSGVSLK 100
Query: 296 LGNFKLPKHFNDDY 255
NF L KH N DY
Sbjct: 101 GLNF-LTKHTNKDY 113
>UniRef50_Q8U2L5 Cluster: 50S ribosomal protein L14e; n=5;
Archaea|Rep: 50S ribosomal protein L14e - Pyrococcus
furiosus
Length = 83
Score = 40.7 bits (91), Expect = 0.032
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = -2
Query: 479 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYV 321
P + +G + +++AGR AG++VV+V I+ +LVTG N RR+ +++
Sbjct: 2 PAIDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGA-GLNKVKRRRMNIKHI 53
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 39.9 bits (89), Expect = 0.056
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -2
Query: 482 RPNLKIGTVCILLAGRHAGKRVVLVGILP 396
+P +K G VCI+L GRHAGK+ V+V LP
Sbjct: 3 QPIIKPGLVCIVLQGRHAGKKAVIVEALP 31
>UniRef50_P54054 Cluster: 50S ribosomal protein L14e; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L14e -
Methanococcus jannaschii
Length = 80
Score = 39.5 bits (88), Expect = 0.075
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -2
Query: 479 PNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRI 336
P +++G VCI AGR AGK V+V IL ++V G C ++ +
Sbjct: 2 PAIEVGRVCIKTAGREAGKVCVIVDILDKNFVIVDGLVKRRRCNIKHL 49
>UniRef50_A7QIH5 Cluster: Chromosome chr12 scaffold_103, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_103, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 345
Score = 39.1 bits (87), Expect = 0.099
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = -2
Query: 554 FYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVT 375
FYP + ++ + +K ++ +R ++ GTV I+LAGR VV + L SGLLL+T
Sbjct: 207 FYPADD-VKKPLINKHKAKPIK-LRASITPGTVLIILAGR-----VVFLKQLSSGLLLIT 259
Query: 374 GPFAFNSCP 348
G F N P
Sbjct: 260 GSFKINDVP 268
>UniRef50_Q8ZYB4 Cluster: 50S ribosomal protein L14e; n=14;
Archaea|Rep: 50S ribosomal protein L14e - Pyrobaculum
aerophilum
Length = 103
Score = 37.9 bits (84), Expect = 0.23
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = -2
Query: 473 LKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISL 294
+ IG V + + GR AG++ V+V I+ +++TGP RR+ ++ T +I +
Sbjct: 5 IDIGRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRVNINHIEPTDKKIDI 64
>UniRef50_A0EZZ8 Cluster: 60S ribosomal protein L6; n=5;
Euteleostomi|Rep: 60S ribosomal protein L6 -
Scophthalmus maximus (Turbot)
Length = 54
Score = 36.3 bits (80), Expect = 0.70
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = -2
Query: 182 KEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYLQ 66
KEKY +EQRK DQK VD ++ + P LRGYL+
Sbjct: 3 KEKYQLTEQRKEDQKAVDAQLLTLVKKTPQ---LRGYLR 38
>UniRef50_Q4ZTN3 Cluster: Sensor protein; n=5; Pseudomonas|Rep:
Sensor protein - Pseudomonas syringae pv. syringae
(strain B728a)
Length = 676
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = -2
Query: 515 GRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFN 357
GR ++ R++RP LK+ + + G +A V G L +G+ L+T PFAF+
Sbjct: 617 GRQLAEIARQLRPELKV----LFITG-YAEHAAVRGGFLDTGMQLITKPFAFD 664
>UniRef50_Q1LEC7 Cluster: ThiamineS; n=5; Proteobacteria|Rep:
ThiamineS - Ralstonia metallidurans (strain CH34 / ATCC
43123 / DSM 2839)
Length = 89
Score = 33.9 bits (74), Expect = 3.7
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Frame = -2
Query: 194 FATKKEKYVPSEQRKTDQKTVDEAVIKAIGARPDKKVLRGYL---QGGLRTPL 45
FA ++++P+ +R+ D +T+ EA ++A+ A D+ LRGY+ QG LR L
Sbjct: 6 FAASIQRHIPTPEREVDARTLGEA-LEAVFA--DRPQLRGYILDDQGALRRHL 55
>UniRef50_A7ET80 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 752
Score = 33.9 bits (74), Expect = 3.7
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -2
Query: 599 KNGGTRTVPLKRRKSFYPTQEKIRASSGGRPFSKHVRRIRPNLK 468
K R LK SF P + + ASS GRP K +R+R LK
Sbjct: 128 KEDHNREEELKAMVSFMPHRPAVDASSSGRPMKKDSKRMRNGLK 171
>UniRef50_A6GK83 Cluster: Translation initiation factor IF-2; n=1;
Plesiocystis pacifica SIR-1|Rep: Translation initiation
factor IF-2 - Plesiocystis pacifica SIR-1
Length = 936
Score = 33.5 bits (73), Expect = 4.9
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 156 AQNRSEDSRRG-CDQSHRSPTRQEGAPRIPXRRPSDS 49
A RSE RRG ++ RSP R++G+ R P R PS S
Sbjct: 118 AVRRSEVRRRGQSPEASRSPERRDGSARQPARAPSGS 154
>UniRef50_A5C2Z1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 434
Score = 33.5 bits (73), Expect = 4.9
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -2
Query: 146 DQKTVDEAVIKAIGARPDKKVLRGYLQGGLRTPLQPISPSAALLN 12
+QK DE V+ ++ PD + ++G L L P+ P++ + AL N
Sbjct: 199 EQKLFDEVVMASVFQNPDLRKIQGQLADMLGLPIAPVTVAKALKN 243
>UniRef50_Q7SHY6 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 398
Score = 33.5 bits (73), Expect = 4.9
Identities = 24/97 (24%), Positives = 44/97 (45%)
Frame = -3
Query: 298 HSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL* 119
HSA ++ +T + + + RS +N++++A TSLP T + ++P+ TR
Sbjct: 165 HSAANDSSSTIARLGNNQNRSTTNMRTSAAASSTSLP---TTTTTNAGSRPVAGTRTRAQ 221
Query: 118 SKPSEPDPTRRCSADTXKAAFGLRSSQYPHRLRF*IL 8
+ P P + S+ + S P R F +L
Sbjct: 222 TTPDTPSRSTNSSSPPPRVGLPPVPSGPPSRTDFPVL 258
>UniRef50_Q5KML3 Cluster: VpsB, putative; n=2; Basidiomycota|Rep:
VpsB, putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 686
Score = 33.5 bits (73), Expect = 4.9
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 400 RIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNGRPPDEARI 534
R+P+ L A L A R Q P ++ +++ T + NG PP+ AR+
Sbjct: 397 RVPSPNKLRLAILYALRYQKSPSAQIPQVVSTLISNGVPPERARL 441
>UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2;
Lactococcus lactis subsp. cremoris|Rep:
Cation-transporting ATPase - Lactococcus lactis subsp.
cremoris (strain MG1363)
Length = 841
Score = 33.1 bits (72), Expect = 6.5
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -2
Query: 422 RVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISL 294
+++++GI+P +L++ F F+S L IPQR T ++
Sbjct: 215 KIIVIGIIPISILVLLNQFVFSSLDLSVIPQRKTAIIGTAATI 257
>UniRef50_A7AS85 Cluster: Ribosomal protein L14, putative; n=1;
Babesia bovis|Rep: Ribosomal protein L14, putative -
Babesia bovis
Length = 133
Score = 32.7 bits (71), Expect = 8.6
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -2
Query: 464 GTVCILLAGRHAGKRVVLVGILPSGLLLVTGPFAFNSCPLRRIPQRYVICTSTRISL 294
G +C++ G AGK V+V I+ + +LV G ++IP ++ T T+I+L
Sbjct: 11 GRLCLITYGPDAGKLCVIVDIVTNTRILVDGGM-ITGVERQQIPVTWIKLTDTKITL 66
>UniRef50_A7E738 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 331
Score = 32.7 bits (71), Expect = 8.6
Identities = 25/70 (35%), Positives = 35/70 (50%)
Frame = -3
Query: 316 APPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRR 137
AP S+TS+ QN S +SR ++++S+ S AKR K T SS+ P +R
Sbjct: 15 APSSTNGSSTSSAQNASGT-SSRTVKTSSS--SPAKRGDVKESSKPSRTVTASSSSPAKR 71
Query: 136 QSTRL*SKPS 107
SKPS
Sbjct: 72 DDVNESSKPS 81
>UniRef50_A1CF41 Cluster: Translation factor pelota, putative; n=7;
Pezizomycotina|Rep: Translation factor pelota, putative
- Aspergillus clavatus
Length = 410
Score = 32.7 bits (71), Expect = 8.6
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 583 EQYPSNVGSPSTPLRRKSVPHLVAVHSASMYAGS 482
++Y +V S +TP ++ +P LV VHSAS Y S
Sbjct: 239 QKYIQSVASTTTPALKRLLPSLVVVHSASGYLHS 272
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 696,987,090
Number of Sequences: 1657284
Number of extensions: 15021780
Number of successful extensions: 46972
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 44804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46927
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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