Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F24
(684 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00036-4|AAK29850.1| 217|Caenorhabditis elegans Ribosomal prote... 125 3e-29
Z83102-9|CAI79156.1| 82|Caenorhabditis elegans Hypothetical pr... 31 0.77
U97404-2|AAB93309.1| 795|Caenorhabditis elegans Acid-sensing/am... 31 1.0
U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical pr... 29 2.3
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr... 29 2.3
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z50740-1|CAA90607.1| 1089|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z73976-8|CAI79223.1| 215|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 27 9.4
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 27 9.4
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 9.4
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 27 9.4
U58762-3|AAM15611.1| 331|Caenorhabditis elegans Hypothetical pr... 27 9.4
U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical pr... 27 9.4
U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical pr... 27 9.4
AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like se... 27 9.4
AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical... 27 9.4
>U00036-4|AAK29850.1| 217|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 6 protein.
Length = 217
Score = 125 bits (301), Expect = 3e-29
Identities = 70/140 (50%), Positives = 87/140 (62%), Gaps = 1/140 (0%)
Frame = -2
Query: 485 IRPNLKIGTVCILLAGRHAGKRVVLVGILP-SGLLLVTGPFAFNSCPLRRIPQRYVICTS 309
+R L GTV I+LAGRH GKRVV + LP SGLLLVTGP N PLRRI Q +VI TS
Sbjct: 67 LRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFVIATS 126
Query: 308 TRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXKEGDDIFATKKEKYVPSEQRKTDQKTVD 129
++++ K+P+H ND+YF K G +IFA+ K +Y SEQRK D KTVD
Sbjct: 127 LKVNVSGVKIPEHINDEYF------KRKSTAQKTGKNIFASGKTEYTVSEQRKKDIKTVD 180
Query: 128 EAVIKAIGARPDKKVLRGYL 69
++ AI P+ K L GYL
Sbjct: 181 APILAAIKKHPEHKFLFGYL 200
>Z83102-9|CAI79156.1| 82|Caenorhabditis elegans Hypothetical
protein C54C8.12 protein.
Length = 82
Score = 31.1 bits (67), Expect = 0.77
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -2
Query: 554 FYPTQEKIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKR 420
FYPT+ +A S G P + PN ++ V A RHAG R
Sbjct: 26 FYPTEISTKARSHGHPVNTLGESEDPNFQVDNVPGERARRHAGPR 70
>U97404-2|AAB93309.1| 795|Caenorhabditis elegans
Acid-sensing/amiloride-sensitiveion channel family
protein 1 protein.
Length = 795
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 144 SEDSRRGCDQSHRSPTRQEGAPRIPXRRPSDSAPANIP 31
+E +R C Q H S T G PR P R S + P + P
Sbjct: 594 TEGCQRSCIQKHLSKTCGCGDPRFPPYRESKNCPVDDP 631
>U00065-8|AAL02473.1| 501|Caenorhabditis elegans Hypothetical
protein D1044.2b protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 120 DQSHRSPTRQEGAPRIPXRRPSDSAPANIPI 28
D S R+P ++E +P + S +APA+ PI
Sbjct: 216 DFSIRTPLKEEATTSVPREKTSSAAPAHSPI 246
>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
protein D1044.2c protein.
Length = 1090
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 120 DQSHRSPTRQEGAPRIPXRRPSDSAPANIPI 28
D S R+P ++E +P + S +APA+ PI
Sbjct: 766 DFSIRTPLKEEATTSVPREKTSSAAPAHSPI 796
>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
protein D1044.2a protein.
Length = 1051
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 120 DQSHRSPTRQEGAPRIPXRRPSDSAPANIPI 28
D S R+P ++E +P + S +APA+ PI
Sbjct: 766 DFSIRTPLKEEATTSVPREKTSSAAPAHSPI 796
>Z50740-1|CAA90607.1| 1089|Caenorhabditis elegans Hypothetical
protein F31B12.2 protein.
Length = 1089
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -3
Query: 241 RSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPS 107
RSA +V+ +V+ + + R + HLS+++PI +S S P+
Sbjct: 364 RSAVSVEGVLLKVLAEVAELVRQSQHLSASEPITEESPSAGSPPA 408
>Z73976-8|CAI79223.1| 215|Caenorhabditis elegans Hypothetical
protein T07C12.14 protein.
Length = 215
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 108 RSPTRQEGAPRIPXRRPSDSAPA 40
R R G PR+P RRP PA
Sbjct: 10 RGGKRDRGTPRLPIRRPPSEEPA 32
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +1
Query: 340 RRSGHELNAKGPVTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNG 510
R E+NA+ RP + S L AC+ + + G + TC ++G
Sbjct: 32 RWQSSEMNAEAARRTKRPKVQFQDSDIFLSACMSGDEEEVEELLNKGANINTCTVDG 88
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +1
Query: 340 RRSGHELNAKGPVTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNG 510
R E+NA+ RP + S L AC+ + + G + TC ++G
Sbjct: 32 RWQSSEMNAEAARRTKRPKVQFQDSDIFLSACMSGDEEEVEELLNKGANINTCTVDG 88
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +1
Query: 340 RRSGHELNAKGPVTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNG 510
R E+NA+ RP + S L AC+ + + G + TC ++G
Sbjct: 32 RWQSSEMNAEAARRTKRPKVQFQDSDIFLSACMSGDEEEVEELLNKGANINTCTVDG 88
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +1
Query: 340 RRSGHELNAKGPVTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNG 510
R E+NA+ RP + S L AC+ + + G + TC ++G
Sbjct: 32 RWQSSEMNAEAARRTKRPKVQFQDSDIFLSACMSGDEEEVEELLNKGANINTCTVDG 88
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +1
Query: 340 RRSGHELNAKGPVTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNG 510
R E+NA+ RP + S L AC+ + + G + TC ++G
Sbjct: 32 RWQSSEMNAEAARRTKRPKVQFQDSDIFLSACMSGDEEEVEELLNKGANINTCTVDG 88
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +1
Query: 340 RRSGHELNAKGPVTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNG 510
R E+NA+ RP + S L AC+ + + G + TC ++G
Sbjct: 32 RWQSSEMNAEAARRTKRPKVQFQDSDIFLSACMSGDEEEVEELLNKGANINTCTVDG 88
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +1
Query: 340 RRSGHELNAKGPVTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNG 510
R E+NA+ RP + S L AC+ + + G + TC ++G
Sbjct: 32 RWQSSEMNAEAARRTKRPKVQFQDSDIFLSACMSGDEEEVEELLNKGANINTCTVDG 88
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +1
Query: 340 RRSGHELNAKGPVTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNG 510
R E+NA+ RP + S L AC+ + + G + TC ++G
Sbjct: 32 RWQSSEMNAEAARRTKRPKVQFQDSDIFLSACMSGDEEEVEELLNKGANINTCTVDG 88
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +1
Query: 340 RRSGHELNAKGPVTKSRPLGRIPTSTTLLPACLPARRMQTVPIFRLGRILRTCLLNG 510
R E+NA+ RP + S L AC+ + + G + TC ++G
Sbjct: 32 RWQSSEMNAEAARRTKRPKVQFQDSDIFLSACMSGDEEEVEELLNKGANINTCTVDG 88
>U58762-3|AAM15611.1| 331|Caenorhabditis elegans Hypothetical
protein T27F7.2c protein.
Length = 331
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = -3
Query: 238 SASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPSEPDPTRRCSADTXKAA 59
S+S N KR+ T PQ L +R ++ P EP PT C+A T +
Sbjct: 58 SSSTSSVNPKRMSTIEPQAPTREQLLQLQNQMRCAASS--PVPEEPRPTDLCAASTTTST 115
Query: 58 FGLRSS 41
+ SS
Sbjct: 116 SSVASS 121
>U58762-2|AAK39302.1| 722|Caenorhabditis elegans Hypothetical
protein T27F7.2b protein.
Length = 722
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = -3
Query: 238 SASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPSEPDPTRRCSADTXKAA 59
S+S N KR+ T PQ L +R ++ P EP PT C+A T +
Sbjct: 427 SSSTSSVNPKRMSTIEPQAPTREQLLQLQNQMRCAASS--PVPEEPRPTDLCAASTTTST 484
Query: 58 FGLRSS 41
+ SS
Sbjct: 485 SSVASS 490
>U58762-1|AAK39301.1| 732|Caenorhabditis elegans Hypothetical
protein T27F7.2a protein.
Length = 732
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = -3
Query: 238 SASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*SKPSEPDPTRRCSADTXKAA 59
S+S N KR+ T PQ L +R ++ P EP PT C+A T +
Sbjct: 437 SSSTSSVNPKRMSTIEPQAPTREQLLQLQNQMRCAASS--PVPEEPRPTDLCAASTTTST 494
Query: 58 FGLRSS 41
+ SS
Sbjct: 495 SSVASS 500
>AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like
serine/threonine kinase protein.
Length = 596
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = -3
Query: 295 SATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*S 116
+ +N TS ++ SA+N + T+ Q TF+ + I ST S
Sbjct: 7 AGNTNTTTTSSAASAAAAHSAANASTITSEYSTT--QTTTGTFNTDTLSSIGSTSTLHGS 64
Query: 115 KPSEPDP 95
+PS+P P
Sbjct: 65 QPSQPPP 71
>AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical
protein Y59A8B.23 protein.
Length = 596
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = -3
Query: 295 SATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSSAKPIRRQSTRL*S 116
+ +N TS ++ SA+N + T+ Q TF+ + I ST S
Sbjct: 7 AGNTNTTTTSSAASAAAAHSAANASTITSEYSTT--QTTTGTFNTDTLSSIGSTSTLHGS 64
Query: 115 KPSEPDP 95
+PS+P P
Sbjct: 65 QPSQPPP 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,897,864
Number of Sequences: 27780
Number of extensions: 353365
Number of successful extensions: 1079
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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