Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_F21
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   1.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   6.7  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   6.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.9  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 439 IPYRALLRHPNGPFRPTTFGNKF 507
           +P+R L   P   FRP T+ N+F
Sbjct: 494 LPFRFLFYKPEDIFRPNTY-NRF 515


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -1

Query: 620 ERAEVKKGLDTPKINGKFSLRASATGMILLDEVVIPEENL 501
           + A +  G   P  +GK     S   +  +D+V   EENL
Sbjct: 429 KNARLSFGRAEPVFDGKVPSNGSLNQISDIDDVNFQEENL 468


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = -1

Query: 620 ERAEVKKGLDTPKINGKFSLRASATGMILLDEVVIPEENL 501
           + A +  G   P  +GK     S   +  +D+V   EENL
Sbjct: 254 KNARLSFGRAEPVFDGKVPSNGSLNQISDIDDVNFQEENL 293


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -1

Query: 137 YHIIRHVMNLEAVNTYEGT 81
           YHI  H++  + ++ Y+ T
Sbjct: 59  YHIFMHIVPTKLISFYKST 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,205
Number of Sequences: 336
Number of extensions: 2684
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)