Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F21
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310... 118 5e-27
05_01_0464 - 3670397-3670525,3671152-3671244,3671366-3671537,367... 117 7e-27
06_02_0285 + 13789900-13790071,13790407-13790525,13790642-137907... 109 2e-24
06_02_0283 + 13726047-13726090,13726160-13726266,13726515-137266... 85 5e-17
05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828,141... 65 4e-11
07_03_1669 + 28499143-28499409,28499915-28500055,28500528-285006... 36 0.028
07_03_0075 - 13096386-13096554,13096642-13096766,13096851-130971... 32 0.35
11_06_0340 - 22500411-22500566,22500660-22500783,22500914-225010... 32 0.46
06_03_1336 - 29424470-29424897,29425243-29429653 31 0.61
09_06_0370 - 22610441-22610569,22610659-22611060,22611141-226111... 29 3.3
10_08_0096 - 14765789-14766994 29 4.3
03_05_1021 - 29750155-29750220,29750342-29750428,29750614-297507... 29 4.3
03_05_0545 + 25419031-25420758 29 4.3
01_01_0127 + 1164871-1165346,1165835-1165934,1166007-1166102,116... 27 9.9
>01_01_0413 -
3107668-3107796,3107879-3107971,3108082-3108253,
3108341-3108417,3108514-3108673,3108766-3108875,
3109384-3109443,3109545-3109618,3109748-3109871,
3110795-3110872,3111169-3111275,3112572-3112673,
3112800-3112815
Length = 433
Score = 118 bits (283), Expect = 5e-27
Identities = 70/201 (34%), Positives = 107/201 (53%)
Frame = -1
Query: 641 KVXGFIVERAEVKKGLDTPKINGKFSLRASATGMILLDEVVIPEENLLPNVVGLKGPFGC 462
++ GFIV + GL KI K LR G I+ ++V +PEE+ LP V +
Sbjct: 221 QLNGFIVRKGA--PGLKATKIENKIGLRMVQNGDIVFNKVFVPEEDRLPGVNSFQDISKV 278
Query: 461 LNNARYGIAWGALGSAETCLRIARQYTLDRKQFGRPLASNQLVQKKLADMLTEINIGYQA 282
L +R +AW +G + + +Y +RKQFG PL + QL Q+KL ML I
Sbjct: 279 LAISRVMVAWQPIGISMGVFDVCHRYLKERKQFGVPLVAFQLNQEKLVRMLGNIQAMLLV 338
Query: 281 CLRVGRLKDEDKAAPEMISLIKRNSCGKALEIARVARDMLGGNGISDEYHIIRHVMNLEA 102
R+ +L + K P SL K + A E+ + R++LGGNGI ++ + + +LE
Sbjct: 339 GWRLCKLYESGKMTPGHASLGKGWTSRMAREVVSLGRELLGGNGILADFLVAKAFCDLEP 398
Query: 101 VNTYEGTHDIHALXLGRAMTG 39
+ +YEGT+DI++L GR +TG
Sbjct: 399 IYSYEGTYDINSLVTGREITG 419
>05_01_0464 -
3670397-3670525,3671152-3671244,3671366-3671537,
3671626-3671702,3671819-3671978,3672104-3672213,
3672321-3672380,3672492-3672629,3672922-3672999,
3673227-3673333,3674506-3674598,3674708-3674723
Length = 410
Score = 117 bits (282), Expect = 7e-27
Identities = 70/204 (34%), Positives = 110/204 (53%)
Frame = -1
Query: 650 DEGKVXGFIVERAEVKKGLDTPKINGKFSLRASATGMILLDEVVIPEENLLPNVVGLKGP 471
D ++ GFIV++ GL KI K LR I+L++V +P+E+ L + +
Sbjct: 195 DTNQLNGFIVKKGA--PGLKCTKIENKIGLRMVQNADIVLNKVFVPDEDRLTGINSFQDI 252
Query: 470 FGCLNNARYGIAWGALGSAETCLRIARQYTLDRKQFGRPLASNQLVQKKLADMLTEINIG 291
L +R +AW +G + + +Y +RKQFG PLA+ QL Q+KL ML I
Sbjct: 253 NKVLAMSRIMVAWQPIGISMGVFDMCHRYLKERKQFGVPLAAFQLNQEKLVRMLGNIQAM 312
Query: 290 YQACLRVGRLKDEDKAAPEMISLIKRNSCGKALEIARVARDMLGGNGISDEYHIIRHVMN 111
R+ +L + K P SL K + KA E+ + R++LGGNGI ++ + + +
Sbjct: 313 LLVGWRLCKLYESGKMTPGHASLGKAWTSKKAREVVSLGRELLGGNGILADFLVAKAFCD 372
Query: 110 LEAVNTYEGTHDIHALXLGRAMTG 39
LE + +YEGT+DI++L GR +TG
Sbjct: 373 LEPIFSYEGTYDINSLVTGREITG 396
>06_02_0285 +
13789900-13790071,13790407-13790525,13790642-13790751,
13790887-13791046,13791407-13791483,13792299-13792470,
13792580-13792672,13793617-13793733
Length = 339
Score = 109 bits (262), Expect = 2e-24
Identities = 66/201 (32%), Positives = 106/201 (52%)
Frame = -1
Query: 641 KVXGFIVERAEVKKGLDTPKINGKFSLRASATGMILLDEVVIPEENLLPNVVGLKGPFGC 462
++ GFIV GL KI K SLR ILL++V +P+++ LP +
Sbjct: 131 QINGFIVNGGS--PGLKISKIENKTSLRVVQNCDILLEDVFVPDDDRLPGANSFQDLVKA 188
Query: 461 LNNARYGIAWGALGSAETCLRIARQYTLDRKQFGRPLASNQLVQKKLADMLTEINIGYQA 282
L+ + +AW ++G A +Y +RKQFG PLA+ QL Q+KL ML I +
Sbjct: 189 LSFSCVIVAWISIGIAAGVYDACLRYLGERKQFGAPLAAFQLNQEKLVRMLGNIQAMWLL 248
Query: 281 CLRVGRLKDEDKAAPEMISLIKRNSCGKALEIARVARDMLGGNGISDEYHIIRHVMNLEA 102
R+ +L D + SL K +A E + R++LGGNGI ++H+ + ++E+
Sbjct: 249 GWRLCKLHDSGRMTTGQASLGKAWITKQARETVALGRELLGGNGIVTDFHVGKAFCDMES 308
Query: 101 VNTYEGTHDIHALXLGRAMTG 39
+ TYEG+++++ L R +TG
Sbjct: 309 IYTYEGSYEVNVLVAAREITG 329
>06_02_0283 +
13726047-13726090,13726160-13726266,13726515-13726621,
13726735-13726812,13734948-13735071,13735585-13735658,
13735742-13735801,13737561-13737670,13737806-13737965,
13738218-13738360,13738461-13738605,13738727-13738819,
13740070-13740186
Length = 453
Score = 85.0 bits (201), Expect = 5e-17
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 22/223 (9%)
Frame = -1
Query: 641 KVXGFIVERAEVKKGLDTPKINGKFSLRASATGMILLDEVVIPEENLLPNVVGLK----- 477
++ GFIV GL KI+ K SLR ILL++V +P+++ LP +
Sbjct: 232 QINGFIVNGGA--PGLKISKIDNKMSLRVVQNCDILLEDVFVPDDDRLPGANSFQDLVKI 289
Query: 476 ---GP--------------FGCLNNARYGIAWGALGSAETCLRIARQYTLDRKQFGRPLA 348
P L+ +R +AW ++G A +Y +RKQFG PLA
Sbjct: 290 YSISPHTIGDTDLTDYVAYIQALSFSRVIVAWISIGIAAGVYDACLRYLGERKQFGAPLA 349
Query: 347 SNQLVQKKLADMLTEINIGYQACLRVGRLKDEDKAAPEMISLIKRNSCGKALEIARVARD 168
+ QL Q+KL +L G+ R+ L D + SL K KA E + R+
Sbjct: 350 AFQLNQEKLMWLL-----GW----RLYELHDSGRMTTGQASLGKAWITKKARETVALGRE 400
Query: 167 MLGGNGISDEYHIIRHVMNLEAVNTYEGTHDIHALXLGRAMTG 39
+LGGNGI ++H+ + ++E++ TYEG+++++AL + R +TG
Sbjct: 401 LLGGNGIVTDFHVGKAFCDMESLYTYEGSYEVNALIVARDITG 443
>05_01_0195 -
1409820-1409966,1410304-1410360,1410774-1410828,
1410902-1411002,1411051-1411205,1411395-1411459,
1411545-1411595,1411817-1411893,1412153-1412262,
1412355-1412403,1412528-1412572,1412689-1412813,
1413087-1413228,1413336-1413446
Length = 429
Score = 65.3 bits (152), Expect = 4e-11
Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 21/219 (9%)
Frame = -1
Query: 638 VXGFIVERAEVKKGLDTPKINGKFSLRASATGMILLDEVVIPEENLLPNV-VGLKGPFGC 462
+ FI+E+ G T + K +R S T ++ + +P EN+L G+
Sbjct: 209 ITAFIIEKG--MPGFSTAQKLDKLGMRGSDTCELVFENCFVPHENVLGEEGKGVYVMMSG 266
Query: 461 LNNARYGIAWGALGSAETCLRIARQYTLDRKQFGRPLASNQ------------------- 339
L+ R +A G +G + CL +A Y R+QFGRP+ Q
Sbjct: 267 LDLERLVLAAGPIGLMQACLDVAVPYVRQREQFGRPIGEFQFIQVQHFVNRRLVPTITSY 326
Query: 338 -LVQKKLADMLTEINIGYQACLRVGRLKDEDKAAPEMISLIKRNSCGKALEIARVARDML 162
L+Q KLADM T + V R D K + + + + +A ++A A L
Sbjct: 327 LLMQGKLADMYTSLQSSRSFVYSVARDCDNGKVDRKDCAGVILFAAERATQVALQAIQCL 386
Query: 161 GGNGISDEYHIIRHVMNLEAVNTYEGTHDIHALXLGRAM 45
GGNG +EY R + + + GT +I + +GR +
Sbjct: 387 GGNGYINEYPTGRLLRDAKLFEIGAGTSEIRRMIIGREL 425
>07_03_1669 + 28499143-28499409,28499915-28500055,28500528-28500659,
28501185-28501373,28501503-28501580,28502267-28502386,
28502701-28502818,28503012-28503280,28503428-28503622,
28503737-28503879,28504096-28504180,28504270-28504479,
28504559-28504711,28504862-28504966,28505044-28505235
Length = 798
Score = 35.9 bits (79), Expect = 0.028
Identities = 35/160 (21%), Positives = 64/160 (40%), Gaps = 3/160 (1%)
Frame = -1
Query: 539 ILLDEVVIPEEN-LLPNVVGLKGPFGCLNNARYGIAWGALGSAETCLRIARQYTLDRKQF 363
I + V +P N LL G + G L R +G+AE + + + L R F
Sbjct: 625 ITFENVRVPATNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMNLMVERALSRTTF 684
Query: 362 GRPLASNQLVQKKLADMLTEINIGYQACLRVGRLKDE--DKAAPEMISLIKRNSCGKALE 189
G+ +A + LA E+ L D +K A ++++ K + AL+
Sbjct: 685 GKKIAQHGSFLADLAKCRVELEQARLLVLEAADQLDRHGNKKARGILAMAKVAAPNMALK 744
Query: 188 IARVARDMLGGNGISDEYHIIRHVMNLEAVNTYEGTHDIH 69
+ +A + GG G+S + + + +G ++H
Sbjct: 745 VLDMAMQVHGGAGLSSDTVLSHLWATARTLRIADGPDEVH 784
>07_03_0075 -
13096386-13096554,13096642-13096766,13096851-13097117,
13097506-13097587,13097956-13098172,13098260-13098360,
13098425-13098627,13099261-13099334,13100246-13100429
Length = 473
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1
Query: 644 GKVXGFIVERAEVKKGLDTPKINGKFSLRASATGMIL 534
G++ GF +R V KG++ PK+ GKF L S +L
Sbjct: 44 GQMGGFGAKRMLVDKGIEDPKLMGKFDLGHSGLSGVL 80
>11_06_0340 -
22500411-22500566,22500660-22500783,22500914-22501080,
22501157-22501336,22501544-22502427,22502728-22502843,
22503745-22504217
Length = 699
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -1
Query: 467 GCLNNARYGIAWGALGSAETCLRIARQYTLDRKQFGRP 354
G L R GIA+ ++G + + IA +Y L R+QFG P
Sbjct: 341 GELVGGRVGIAYSSVGILKVSVTIAVRYALLRQQFGPP 378
>06_03_1336 - 29424470-29424897,29425243-29429653
Length = 1612
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 596 LDTPKINGKFSLRASATGMILLDEVVIPEENLLPNVVGLKGPFGCLNNAR 447
LD K NG F L ++ L ++P++NL +V + G CL R
Sbjct: 744 LDVRKCNGHFGLPRDIDNLVRLRHFLVPDDNLHSDVANV-GKLKCLQELR 792
>09_06_0370 -
22610441-22610569,22610659-22611060,22611141-22611191,
22611475-22611700,22612219-22612289,22612411-22612530,
22612618-22612812,22612995-22613059,22613306-22613396,
22613611-22613672,22613796-22613846,22614326-22614427,
22614876-22614939,22615104-22615247
Length = 590
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 302 INIGYQACLRVGRLKDEDKAAPEMISLIKRNSCGKALEIARVARD 168
++IG + + G L DED A E +R C K LE+ + ARD
Sbjct: 542 VHIGKKEASQFGHLLDEDPAMLE-----RRQQCWKRLELYKSARD 581
>10_08_0096 - 14765789-14766994
Length = 401
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 600 RFRYAQNQWEIFFAGIGNRNDIARRSGYTGGEFIAECSGPEGAV 469
+F+ + W I + G+R+ I SG+ + +C G +GAV
Sbjct: 56 KFKLGGHTWHIKYCPNGDRSTI---SGFVSFHLVLDCDGGDGAV 96
>03_05_1021 -
29750155-29750220,29750342-29750428,29750614-29750799,
29750965-29751059,29751179-29751284,29751378-29751452,
29751548-29751679,29751782-29751961,29752371-29752567,
29752651-29752906
Length = 459
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -1
Query: 446 YGIAWGALGSAETCLRIARQYTLDRKQFGRPLASNQLVQKKLADM 312
YG WG + + +Q+ DR + N V K+L DM
Sbjct: 112 YGFCWGVERAVQIAYEARKQFPDDRIWLTNEIIHNPTVNKRLEDM 156
>03_05_0545 + 25419031-25420758
Length = 575
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 100 TASKFITCRMM*YSSEIPLPPSMSLAT-LAISNALPQLFLLIKDIISG 240
TAS++ + S+E+ LPP+++ T L++ N P +F + +G
Sbjct: 134 TASEYFCASLEGLSAELRLPPAIAGVTLLSLGNGAPDVFASVVSFAAG 181
>01_01_0127 +
1164871-1165346,1165835-1165934,1166007-1166102,
1166182-1166265,1166809-1166871
Length = 272
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 610 R*RKV*IRPKSMGNFLCGHRQ 548
R +KV + P SMG LCGH+Q
Sbjct: 230 RMKKV-VNPSSMGAILCGHKQ 249
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,161,707
Number of Sequences: 37544
Number of extensions: 321235
Number of successful extensions: 712
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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