Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F21
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20822| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 6e-20
SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.) 84 8e-17
SB_50052| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 6e-13
SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_15646| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=8.3e-27) 44 1e-04
SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
>SB_20822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 94.7 bits (225), Expect = 6e-20
Identities = 41/49 (83%), Positives = 45/49 (91%)
Frame = -1
Query: 176 ARDMLGGNGISDEYHIIRHVMNLEAVNTYEGTHDIHALXLGRAMTGRQA 30
ARDM GGNG+SDE+H+IRHVMNLEAVNTYEGTHD+HAL LGRA TG QA
Sbjct: 1 ARDMHGGNGVSDEFHVIRHVMNLEAVNTYEGTHDVHALILGRAQTGLQA 49
>SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 84.2 bits (199), Expect = 8e-17
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 1/197 (0%)
Frame = -1
Query: 632 GFIVERAEVKKGLDTPKINGKFSLRASATGMILLDEVVIPEENLL-PNVVGLKGPFGCLN 456
GFIV+ A+ G+ + RAS T I ++VV+P+EN+L +G K G +
Sbjct: 298 GFIVD-ADTP-GVTPGRKEQNMGQRASDTRGITFEDVVVPKENVLGAEGIGFKIAMGAFD 355
Query: 455 NARYGIAWGALGSAETCLRIARQYTLDRKQFGRPLASNQLVQKKLADMLTEINIGYQACL 276
R +A A+G A L A +Y+++RK G+ + +Q VQ LADM + A
Sbjct: 356 KTRPPVASSAVGLARRALEEATKYSMERKTMGKYICEHQAVQFLLADMAIGVETARLATQ 415
Query: 275 RVGRLKDEDKAAPEMISLIKRNSCGKALEIARVARDMLGGNGISDEYHIIRHVMNLEAVN 96
R D+ + S+ K + A + A A + GGNG + EY + + + + +
Sbjct: 416 RSAWEIDQGRRNTYYASIAKCLAGDVANKCATDAVQIFGGNGFNQEYPVEKLMRDAKIFQ 475
Query: 95 TYEGTHDIHALXLGRAM 45
YEGT I + +GR++
Sbjct: 476 IYEGTAQIQRMIIGRSL 492
>SB_50052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 71.3 bits (167), Expect = 6e-13
Identities = 57/210 (27%), Positives = 94/210 (44%), Gaps = 2/210 (0%)
Frame = -1
Query: 641 KVXGFIVERAEVKKGLDTPKINGKFSLRASATGMILLDEVVIPEENLLPNVV-GLKGPFG 465
KV FIVER G+++ K ++AS T + D V +P EN+L G K
Sbjct: 157 KVTAFIVERGF--GGVESGPPEKKMGIKASNTAEVYFDNVPVPVENVLGGEGNGFKVAMN 214
Query: 464 CLNNARYGIAWGALGSAETCLRIARQYTLDRKQFGRPLASNQLVQKKLADMLTEINIGYQ 285
LNN R+G+A G+ + + A + +R QFG + + +Q+K+A M +
Sbjct: 215 ILNNGRFGMAGALSGTMKGLIEKAVDFAANRTQFGAKIETFGAIQEKIARMAMLHYVTES 274
Query: 284 ACLRVGRLKDEDKAAPEMISLIKRNSCGKAL-EIARVARDMLGGNGISDEYHIIRHVMNL 108
+ D ++ + I + +A +A +LGG G + R + +L
Sbjct: 275 MAYMISANMDSGATDFQVEAAISKVFASEAAWFVADECIQILGGTGFMKSAGVERVMRDL 334
Query: 107 EAVNTYEGTHDIHALXLGRAMTGRQAXAEK 18
+EGT+DI L L A+TG Q ++
Sbjct: 335 RIFRIFEGTNDI--LRLMIALTGLQGAGKR 362
>SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 44.0 bits (99), Expect = 1e-04
Identities = 53/197 (26%), Positives = 85/197 (43%), Gaps = 3/197 (1%)
Frame = -1
Query: 656 KDDEGKVXGFIVERAEVKKGLDT-PKINGKFSLRASATGMILLDEVVIPEENLLPNV-VG 483
K E + F+VE+ G T PK++ K +R S T ++ D IP EN++ V G
Sbjct: 215 KKPEHAITTFLVEKG--MPGFSTSPKLD-KLGMRGSNTCELVFDNCRIPAENVMGEVNKG 271
Query: 482 LKGPFGCLNNARYGIAWGALGSAETCLRIARQYTLDRKQFGRPLASNQLVQKKLADMLTE 303
+ L+ R +A G +G + CL + Y R FG+ + Q A ++
Sbjct: 272 VYVLMSGLDIERLILAAGPVGLMQACLDVTVPYLHARTAFGQKIGEFQ----DCASIILV 327
Query: 302 INIGYQACLRVG-RLKDEDKAAPEMISLIKRNSCGKALEIARVARDMLGGNGISDEYHII 126
++ + C G K D AA +I N A ++A A LGGNG ++Y
Sbjct: 328 LSSAF-VCYSFGVNPKPRDCAA--IILYTAEN----ATQVALDAIQCLGGNGYINDYPTG 380
Query: 125 RHVMNLEAVNTYEGTHD 75
R + + + GT +
Sbjct: 381 RFLRDAKLYEIGAGTSE 397
>SB_15646| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=8.3e-27)
Length = 257
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = -1
Query: 572 KFSLRASATGMILLDEVVIPEENLLPNV-VGLKGPFGCLNNARYGIAWGALGSAETCLRI 396
K +R+S T + D V +P+ N + + G R A + E C+
Sbjct: 83 KLGMRSSETAQVFFDNVRVPQRNRIGHEGAGFMMQMLQFQEERLFGAANMIKGLEHCINA 142
Query: 395 ARQYTLDRKQFGRPLASNQLVQKKLADMLTEI 300
Y +RK FG L NQ++ ++A++ TE+
Sbjct: 143 TIDYCKERKTFGNALIDNQVIHFRMAELQTEV 174
>SB_11283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 40.3 bits (90), Expect = 0.001
Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 2/161 (1%)
Frame = -1
Query: 599 GLDTPKINGKFSLRASATGMILLDEVVIPEENLLPNVVGLKGPFGCLNNARYGIAWGA-- 426
G+ + K + S T + V +P+ + G+ + L + GA
Sbjct: 447 GIQRARNIDKLGMHCSDTAEFYFENVRVPQSYRIGEE-GMGFVYQMLQFVEERVFAGASV 505
Query: 425 LGSAETCLRIARQYTLDRKQFGRPLASNQLVQKKLADMLTEINIGYQACLRVGRLKDEDK 246
L S E ++ +Y R FG+ + NQ V +LA++ TE+ + R L + K
Sbjct: 506 LVSLERLIKETAEYCKGRTAFGKSILDNQYVHYRLAELQTEVELLRSLVYRTTDLHIKKK 565
Query: 245 AAPEMISLIKRNSCGKALEIARVARDMLGGNGISDEYHIIR 123
+ + S++K + E+ GG G + + + R
Sbjct: 566 DSNLLASMLKLKAGRLVREVTDSCLQFWGGMGFTSDVEVSR 606
>SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 32.7 bits (71), Expect = 0.27
Identities = 32/115 (27%), Positives = 51/115 (44%)
Frame = -1
Query: 599 GLDTPKINGKFSLRASATGMILLDEVVIPEENLLPNVVGLKGPFGCLNNARYGIAWGALG 420
GL K +RA++T ++ ++ IP+ENLL G G +G + IA AL
Sbjct: 207 GLTLGNKEDKLGIRATSTCYLVFEDCRIPKENLL----GEPG-YG------FKIAMAALD 255
Query: 419 SAETCLRIARQYTLDRKQFGRPLASNQLVQKKLADMLTEINIGYQACLRVGRLKD 255
A Y R F + ++ Q +Q KLAD+ T++ + +KD
Sbjct: 256 CAV-------DYADKRMAFNQKISKLQTIQMKLADIATQLEAARLLTWKAAAIKD 303
>SB_54962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2211
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = -1
Query: 434 WGALGSAETCLRIARQYTLDRK---QFGRPLASNQLVQK 327
W A G+ +TCLR+ Y DR+ + G+ L+S V +
Sbjct: 823 WKAYGAQDTCLRLLESYLSDRRNRVRMGKDLSSYSTVNR 861
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,512,904
Number of Sequences: 59808
Number of extensions: 361706
Number of successful extensions: 1150
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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