Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F21
(656 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g51840.1 68416.m05685 short-chain acyl-CoA oxidase identical ... 124 5e-29
At3g45300.1 68416.m04891 isovaleryl-CoA-dehydrogenase (IVD) iden... 83 1e-16
At3g06810.1 68416.m00808 acyl-CoA dehydrogenase-related low simi... 42 5e-04
At1g06310.1 68414.m00667 acyl-CoA oxidase, putative strong simil... 36 0.018
At1g06290.1 68414.m00665 acyl-CoA oxidase (ACX3) identical to ac... 36 0.024
At5g65110.1 68418.m08191 acyl-CoA oxidase (ACX2) identical to ac... 30 1.2
At4g34350.1 68417.m04881 LytB family protein contains Pfam profi... 28 4.8
At4g25980.1 68417.m03739 cationic peroxidase, putative similar t... 28 6.3
At1g20640.2 68414.m02584 RWP-RK domain-containing protein simila... 28 6.3
At1g20640.1 68414.m02583 RWP-RK domain-containing protein simila... 28 6.3
At5g67470.1 68418.m08507 formin homology 2 domain-containing pro... 27 8.3
At5g25330.1 68418.m03005 hypothetical protein contains Pfam prof... 27 8.3
At1g56300.1 68414.m06472 DNAJ heat shock N-terminal domain-conta... 27 8.3
>At3g51840.1 68416.m05685 short-chain acyl-CoA oxidase identical to
Short-chain acyl CoA oxidase [Arabidopsis thaliana]
GI:5478795; contains InterPro entry IPR006089: Acyl-CoA
dehydrogenase
Length = 436
Score = 124 bits (299), Expect = 5e-29
Identities = 73/201 (36%), Positives = 108/201 (53%)
Frame = -1
Query: 641 KVXGFIVERAEVKKGLDTPKINGKFSLRASATGMILLDEVVIPEENLLPNVVGLKGPFGC 462
++ GFIV++ GL KI K LR G ILL V +P+E+ LP V +
Sbjct: 226 QINGFIVKKDA--PGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVNSFQDTSKV 283
Query: 461 LNNARYGIAWGALGSAETCLRIARQYTLDRKQFGRPLASNQLVQKKLADMLTEINIGYQA 282
L +R +AW +G + + +Y +RKQFG PLA+ QL Q+KL ML + +
Sbjct: 284 LAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLM 343
Query: 281 CLRVGRLKDEDKAAPEMISLIKRNSCGKALEIARVARDMLGGNGISDEYHIIRHVMNLEA 102
R+ +L + + P SL K KA E A + R++LGGNGI ++ + + +LE
Sbjct: 344 GWRLCKLYETGQMTPGQASLGKAWISSKARETASLGRELLGGNGILADFLVAKAFCDLEP 403
Query: 101 VNTYEGTHDIHALXLGRAMTG 39
+ TYEGT+DI+ L GR +TG
Sbjct: 404 IYTYEGTYDINTLVTGREVTG 424
>At3g45300.1 68416.m04891 isovaleryl-CoA-dehydrogenase (IVD)
identical to isovaleryl-CoA-dehydrogenase precursor
[Arabidopsis thaliana] GI:5596622
Length = 409
Score = 83.4 bits (197), Expect = 1e-16
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 1/199 (0%)
Frame = -1
Query: 638 VXGFIVERAEVKKGLDTPKINGKFSLRASATGMILLDEVVIPEENLLPNV-VGLKGPFGC 462
+ FI+E+ G T + K +R S T ++ + +PEEN+L G+
Sbjct: 209 ITAFIIEKGMT--GFSTAQKLDKLGMRGSDTCELVFENCFVPEENILDKEGKGVYVLMSG 266
Query: 461 LNNARYGIAWGALGSAETCLRIARQYTLDRKQFGRPLASNQLVQKKLADMLTEINIGYQA 282
L+ R +A G LG + CL Y R+QFGRP+ Q +Q K+ADM T +
Sbjct: 267 LDLERLVLAAGPLGIMQACLDNVLPYIRQREQFGRPVGEFQFIQGKVADMYTALQSSRSY 326
Query: 281 CLRVGRLKDEDKAAPEMISLIKRNSCGKALEIARVARDMLGGNGISDEYHIIRHVMNLEA 102
V R D K P+ + + +A ++A A LGGNG +EY R + + +
Sbjct: 327 VYSVARDCDNGKVDPKDCAGTILCAAERATQVALQAIQCLGGNGYINEYATGRLLRDAKL 386
Query: 101 VNTYEGTHDIHALXLGRAM 45
GT +I + +GR +
Sbjct: 387 YEIGAGTSEIRRIVIGREL 405
>At3g06810.1 68416.m00808 acyl-CoA dehydrogenase-related low
similarity to acyl-CoA dehydrogenase [Acinetobacter sp.
NCIMB9871] GI:14587418; contains Pfam profiles PF01636:
Phosphotransferase enzyme family, PF00441: Acyl-CoA
dehydrogenase C-terminal domain, PF02770: Acyl-CoA
dehydrogenase middle domain
Length = 824
Score = 41.5 bits (93), Expect = 5e-04
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 3/166 (1%)
Frame = -1
Query: 539 ILLDEVVIPEEN-LLPNVVGLKGPFGCLNNARYGIAWGALGSAETCLRIARQYTLDRKQF 363
I + VV+P +N LL G + G L R +G+AE + + Q L RK F
Sbjct: 650 ISFENVVVPAKNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMELMAQRALSRKTF 709
Query: 362 GRPLASNQLVQKKLADMLTEINIGYQACLRVGRLKDE--DKAAPEMISLIKRNSCGKALE 189
G+ +A + LA + E+ L D+ +K A ++++ K + AL+
Sbjct: 710 GKFIAQHGSFVSDLAKLRVELEGTRLLVLEAADHLDKFGNKKARGILAMAKVAAPNMALK 769
Query: 188 IARVARDMLGGNGISDEYHIIRHVMNLEAVNTYEGTHDIHALXLGR 51
+ A + G G+S + + + +G ++H +G+
Sbjct: 770 VLDTAIQVHGAAGVSSDTVLAHLWATARTLRIADGPDEVHLGTIGK 815
>At1g06310.1 68414.m00667 acyl-CoA oxidase, putative strong
similarity to acyl-CoA oxidase ACX3 GI:8163758 from
[Arabidopsis thaliana]
Length = 675
Score = 36.3 bits (80), Expect = 0.018
Identities = 49/217 (22%), Positives = 86/217 (39%), Gaps = 29/217 (13%)
Frame = -1
Query: 572 KFSLRASATGMILLDEVVIPEENLLPNVV----------GLKGP---FGC----LNNARY 444
K L G I D + IP ENLL +V +K P FG L + R
Sbjct: 278 KIGLNGVDNGRIWFDNLRIPRENLLNSVADVLADGKYVSSIKDPDQRFGAFLAPLTSGRV 337
Query: 443 GIAWGALGSAETCLRIARQYTLDRKQFGRPLASNQLV-------QKKLADMLTE-----I 300
IA A+ SA+ L +A +Y+L R+ F +++ Q++L +L +
Sbjct: 338 TIASSAIYSAKLGLAVAIRYSLSRRAFSVAANGPEVLLLDYPSHQRRLLPLLAKTYAMSF 397
Query: 299 NIGYQACLRVGRLKDEDKAAPEMISLIKRNSCGKALEIARVARDMLGGNGISDEYHIIRH 120
+ + V R + +KA + S K + + R+ +GG G+ E +
Sbjct: 398 AVNDLKMIYVKRTPETNKAIHVVSSGFKAVLTWHNMRTLQECREAVGGQGLKTENRVGHL 457
Query: 119 VMNLEAVNTYEGTHDIHALXLGRAMTGRQAXAEKTAK 9
+ T+EG +++ + +A+ +K K
Sbjct: 458 KGEYDVQTTFEGDNNVLMQLVSKALFAEYVSCKKRNK 494
>At1g06290.1 68414.m00665 acyl-CoA oxidase (ACX3) identical to
acyl-CoA oxidase ACX3 [Arabidopsis thaliana] GI:8163758,
GI:8515709
Length = 675
Score = 35.9 bits (79), Expect = 0.024
Identities = 51/217 (23%), Positives = 88/217 (40%), Gaps = 29/217 (13%)
Frame = -1
Query: 572 KFSLRASATGMILLDEVVIPEENLLPNVV----------GLKGP---FGC----LNNARY 444
K L G I D + IP ENLL V +K P FG L + R
Sbjct: 278 KIGLNGVDNGRIWFDNLRIPRENLLNAVADVSSDGKYVSSIKDPDQRFGAFMAPLTSGRV 337
Query: 443 GIAWGALGSAETCLRIARQYTLDRKQFGRPLASNQLV-------QKKLADMLTEIN-IGY 288
IA A+ SA+ L IA +Y+L R+ F +++ Q++L +L + + +
Sbjct: 338 TIASSAIYSAKVGLSIAIRYSLSRRAFSVTANGPEVLLLDYPSHQRRLLPLLAKTYAMSF 397
Query: 287 QA----CLRVGRLKDEDKAAPEMISLIKRNSCGKALEIARVARDMLGGNGISDEYHIIRH 120
A + V R + +KA + S K + + R+ +GG G+ E + +
Sbjct: 398 AANELKMIYVKRTPETNKAIHVVSSGFKAVLTWHNMHTLQECREAVGGQGVKTENLVGQL 457
Query: 119 VMNLEAVNTYEGTHDIHALXLGRAMTGRQAXAEKTAK 9
+ T+EG +++ + +A+ +K K
Sbjct: 458 KGEFDVQTTFEGDNNVLMQQVSKALFAEYVSCKKRNK 494
>At5g65110.1 68418.m08191 acyl-CoA oxidase (ACX2) identical to
acyl-CoA oxidase [Arabidopsis thaliana] GI:3044212
Length = 692
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = -1
Query: 467 GCLNNARYGIAWGALGSAETCLRIARQYTLDRKQFGRP 354
G L R G+A+ ++G + IA +Y+L R+QFG P
Sbjct: 334 GELVGGRVGLAYASVGVLKISATIAIRYSLLRQQFGPP 371
>At4g34350.1 68417.m04881 LytB family protein contains Pfam profile:
PF02401 LytB protein
Length = 466
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = -1
Query: 446 YGIAWGALGSAETCLRIARQYTLDRKQFGRPLASNQLVQKKLADMLTEI 300
YG WG + + +Q+ +R + N V K+L DM +I
Sbjct: 119 YGFCWGVERAVQIAYEARKQFPEERLWITNEIIHNPTVNKRLEDMDVKI 167
>At4g25980.1 68417.m03739 cationic peroxidase, putative similar to
cationic peroxidase [Arachis hypogaea]
gi|166475|gb|AAA32676
Length = 371
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = +1
Query: 166 MSLATLAI---SNALPQLFLLIKDIISGAALS 252
+SLA L + SN PQ ++K ++SGAALS
Sbjct: 66 ISLANLEVGFYSNTCPQAESIVKRVVSGAALS 97
>At1g20640.2 68414.m02584 RWP-RK domain-containing protein similar
to nodule inception protein GI:6448579 from (Lotus
japonicus); contains Pfam profile: PF02042 RWP-RK domain
Length = 844
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 139 SSEIPLPPSMSLATLAISNALPQLFLLIK 225
S+E+P+PPS+ L+ ALP++ L++
Sbjct: 266 STELPIPPSLKGCDLSYKAALPEIRNLLR 294
>At1g20640.1 68414.m02583 RWP-RK domain-containing protein similar
to nodule inception protein GI:6448579 from (Lotus
japonicus); contains Pfam profile: PF02042 RWP-RK domain
Length = 844
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 139 SSEIPLPPSMSLATLAISNALPQLFLLIK 225
S+E+P+PPS+ L+ ALP++ L++
Sbjct: 266 STELPIPPSLKGCDLSYKAALPEIRNLLR 294
>At5g67470.1 68418.m08507 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 899
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 151 PLPPSMSLATLAISNALPQLFLLIKDIISGAALSSSFKRPTRKQAW 288
P PP LA P+ F +++ + + A ++S P+RKQA+
Sbjct: 381 PPPPPPPLAPPPPPQKRPRDFQMLRKVTNSEATTNSTTSPSRKQAF 426
>At5g25330.1 68418.m03005 hypothetical protein contains Pfam profile
PF03267: Arabidopsis protein of unknown function, DUF266
Length = 366
Score = 27.5 bits (58), Expect = 8.3
Identities = 8/33 (24%), Positives = 19/33 (57%)
Frame = -1
Query: 530 DEVVIPEENLLPNVVGLKGPFGCLNNARYGIAW 432
+++ PEE+ P ++ ++ P GC++ + W
Sbjct: 263 EDICYPEEHYFPTLLNMRDPQGCVSATVTHVDW 295
>At1g56300.1 68414.m06472 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI7 DnaJ
homolog subfamily B member 8 Mus musculus; contains Pfam
profile: PF00226: DnaJ domain
Length = 156
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Frame = -1
Query: 236 EMISLIKR-NSCGKALE-IARVARDMLGGNGIS 144
EMIS++ G++LE + R+ DM+GG+G+S
Sbjct: 99 EMISMMNNVKDAGESLEDLQRMFTDMVGGDGVS 131
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,743,985
Number of Sequences: 28952
Number of extensions: 248642
Number of successful extensions: 593
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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