Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_F19
         (771 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0407 - 24983491-24983575,24983655-24984015,24984367-249844...   101   5e-22
01_03_0217 + 13879259-13879270,13880322-13880683,13880771-13880855    101   8e-22
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420...    31   1.0  
03_06_0258 + 32706396-32706821                                         30   2.4  

>04_04_0407 -
           24983491-24983575,24983655-24984015,24984367-24984406,
           24984466-24984468
          Length = 162

 Score =  101 bits (243), Expect = 5e-22
 Identities = 50/81 (61%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
 Frame = -1

Query: 411 KVVK-GEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEA 235
           K VK G   K  +KIR SV F RPKT +  R PKYPR S P RN++D Y I+K+PLT+E+
Sbjct: 32  KAVKSGTAKKTTKKIRTSVTFHRPKTLKKSRDPKYPRVSTPGRNKLDQYQILKYPLTTES 91

Query: 234 AMKKIEDNNTLVFIVHTSANK 172
           AMKKIEDNNTLVFIV   A+K
Sbjct: 92  AMKKIEDNNTLVFIVDLKADK 112



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 28/46 (60%), Positives = 29/46 (63%)
 Frame = -2

Query: 161 KAAVKKLYDINVAKVNTLIRPDGKKKXXXXXXXXXXXXXXANKIGI 24
           KAAVKK+YDI   KVNTLIRPDGKKK              ANKIGI
Sbjct: 116 KAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGI 161


>01_03_0217 + 13879259-13879270,13880322-13880683,13880771-13880855
          Length = 152

 Score =  101 bits (241), Expect = 8e-22
 Identities = 49/81 (60%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
 Frame = -1

Query: 411 KVVK-GEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEA 235
           K VK G   ++ +KIR SV F RPKT +  R PKYPR S P RN++D Y I+K+PLT+E+
Sbjct: 22  KAVKSGSIKRKSKKIRTSVTFHRPKTLKKARDPKYPRVSAPGRNKLDQYQILKYPLTTES 81

Query: 234 AMKKIEDNNTLVFIVHTSANK 172
           AMKKIEDNNTLVFIV   A+K
Sbjct: 82  AMKKIEDNNTLVFIVDLKADK 102



 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 28/46 (60%), Positives = 29/46 (63%)
 Frame = -2

Query: 161 KAAVKKLYDINVAKVNTLIRPDGKKKXXXXXXXXXXXXXXANKIGI 24
           KAAVKK+YDI   KVNTLIRPDGKKK              ANKIGI
Sbjct: 106 KAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGI 151


>07_01_0566 +
           4207894-4207974,4208090-4208144,4208671-4208759,
           4209742-4209794,4209966-4210120,4210201-4210528,
           4210618-4210730,4211394-4211538,4211951-4212259,
           4212340-4212420,4212989-4213349
          Length = 589

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -1

Query: 405 VKGEHGKRVRKIR-NSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYN 265
           +KGE  K++R+   NS   +R KT +PP H K  +K   K    D+Y+
Sbjct: 140 LKGEKEKKLRRTEDNSAAEKRVKTQKPPTHDKQKKKR--KHYSSDSYS 185


>03_06_0258 + 32706396-32706821
          Length = 141

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 452 FFVP*SQSFWASVQSSIWKLLAWVWQ 529
           FFVP S S W    SS   L +W+W+
Sbjct: 55  FFVPSSSSSWICPSSSTRLLASWIWR 80


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,601,046
Number of Sequences: 37544
Number of extensions: 260803
Number of successful extensions: 623
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)