Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_F19
         (771 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    24   4.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    24   4.5  
AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    24   4.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   6.0  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            23   7.9  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 203 WSLLSTQVQTSTIXKAAVKKLYDINVAKVNTLIRP 99
           W L +  V  +       K+LYD  ++  N L+RP
Sbjct: 11  WLLSALVVHGAVAGNPDAKRLYDDLLSNYNKLVRP 45


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -2

Query: 203 WSLLSTQVQTSTIXKAAVKKLYDINVAKVNTLIRP 99
           W L +  V  +       K+LYD  ++  N L+RP
Sbjct: 11  WLLSALVVHGAVAGNPDAKRLYDDLLSNYNKLVRP 45


>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = -1

Query: 372 IRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKK 223
           +R+  +F RP  F P R       S+P    ++ +  + F   S + + K
Sbjct: 416 LRDEKYFHRPTEFIPERWLNDRDASIPSAKEVNPFIFLPFGFGSRSCIGK 465


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -2

Query: 290 REIAWMPTTSLNSLSRLKQQ*RRLKITTPWSLLSTQVQ-TSTIXKAAVKKLYD 135
           RE+  +P  ++  LS LKQ    L    PW      ++  +TI +  VK  YD
Sbjct: 305 RELKSIPDPTVGPLSYLKQYLELLDEFGPWGADRGALELLTTIDQEKVKVPYD 357


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -2

Query: 365 TLCISADPRRLNLLGTLSTQGSLCLREIAWMP 270
           T CI         L     +GS+C RE  W+P
Sbjct: 18  TECIDTTTYAKKNLNYCCCRGSMCNREHKWIP 49


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,159
Number of Sequences: 2352
Number of extensions: 9870
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)