Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F19
(771 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 117 5e-26
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 117 5e-26
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 117 5e-26
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 117 5e-26
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 117 5e-26
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 117 5e-26
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 115 2e-25
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 107 3e-23
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 107 3e-23
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 107 3e-23
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 107 3e-23
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 94 6e-19
BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein. 92 2e-18
BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7 pro... 91 3e-18
AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibilit... 51 5e-06
AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibilit... 51 5e-06
AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibilit... 51 5e-06
AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibilit... 51 5e-06
AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibilit... 51 5e-06
AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibilit... 51 5e-06
AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibili... 51 5e-06
BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibilit... 47 7e-05
BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibilit... 47 7e-05
BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein. 47 7e-05
BC060042-1|AAH60042.1| 81|Homo sapiens LOC649946 protein protein. 43 0.001
BC017930-1|AAH17930.1| 81|Homo sapiens LOC649946 protein protein. 43 0.001
AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens ... 43 0.001
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 117 bits (281), Expect = 5e-26
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = -1
Query: 417 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSE 238
++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKFPLT+E
Sbjct: 25 KKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTE 84
Query: 237 AAMKKIEDNNTLVFIVHTSANKH 169
+AMKKIEDNNTLVFIV ANKH
Sbjct: 85 SAMKKIEDNNTLVFIVDVKANKH 107
Score = 55.6 bits (128), Expect = 2e-07
Identities = 29/46 (63%), Positives = 31/46 (67%)
Frame = -2
Query: 161 KAAVKKLYDINVAKVNTLIRPDGKKKXXXXXXXXXXXXXXANKIGI 24
K AVKKLYDI+VAKVNTLIRPDG+KK ANKIGI
Sbjct: 110 KQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 117 bits (281), Expect = 5e-26
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = -1
Query: 417 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSE 238
++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKFPLT+E
Sbjct: 25 KKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTE 84
Query: 237 AAMKKIEDNNTLVFIVHTSANKH 169
+AMKKIEDNNTLVFIV ANKH
Sbjct: 85 SAMKKIEDNNTLVFIVDVKANKH 107
Score = 55.6 bits (128), Expect = 2e-07
Identities = 29/46 (63%), Positives = 31/46 (67%)
Frame = -2
Query: 161 KAAVKKLYDINVAKVNTLIRPDGKKKXXXXXXXXXXXXXXANKIGI 24
K AVKKLYDI+VAKVNTLIRPDG+KK ANKIGI
Sbjct: 110 KQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 117 bits (281), Expect = 5e-26
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = -1
Query: 417 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSE 238
++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKFPLT+E
Sbjct: 16 KKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTE 75
Query: 237 AAMKKIEDNNTLVFIVHTSANKH 169
+AMKKIEDNNTLVFIV ANKH
Sbjct: 76 SAMKKIEDNNTLVFIVDVKANKH 98
Score = 55.6 bits (128), Expect = 2e-07
Identities = 29/46 (63%), Positives = 31/46 (67%)
Frame = -2
Query: 161 KAAVKKLYDINVAKVNTLIRPDGKKKXXXXXXXXXXXXXXANKIGI 24
K AVKKLYDI+VAKVNTLIRPDG+KK ANKIGI
Sbjct: 101 KQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 146
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 117 bits (281), Expect = 5e-26
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = -1
Query: 417 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSE 238
++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKFPLT+E
Sbjct: 25 KKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTE 84
Query: 237 AAMKKIEDNNTLVFIVHTSANKH 169
+AMKKIEDNNTLVFIV ANKH
Sbjct: 85 SAMKKIEDNNTLVFIVDVKANKH 107
Score = 55.6 bits (128), Expect = 2e-07
Identities = 29/46 (63%), Positives = 31/46 (67%)
Frame = -2
Query: 161 KAAVKKLYDINVAKVNTLIRPDGKKKXXXXXXXXXXXXXXANKIGI 24
K AVKKLYDI+VAKVNTLIRPDG+KK ANKIGI
Sbjct: 110 KQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 117 bits (281), Expect = 5e-26
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = -1
Query: 417 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSE 238
++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKFPLT+E
Sbjct: 25 KKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTE 84
Query: 237 AAMKKIEDNNTLVFIVHTSANKH 169
+AMKKIEDNNTLVFIV ANKH
Sbjct: 85 SAMKKIEDNNTLVFIVDVKANKH 107
Score = 55.6 bits (128), Expect = 2e-07
Identities = 29/46 (63%), Positives = 31/46 (67%)
Frame = -2
Query: 161 KAAVKKLYDINVAKVNTLIRPDGKKKXXXXXXXXXXXXXXANKIGI 24
K AVKKLYDI+VAKVNTLIRPDG+KK ANKIGI
Sbjct: 110 KQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 117 bits (281), Expect = 5e-26
Identities = 54/83 (65%), Positives = 64/83 (77%)
Frame = -1
Query: 417 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSE 238
++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKFPLT+E
Sbjct: 25 KKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKFPLTTE 84
Query: 237 AAMKKIEDNNTLVFIVHTSANKH 169
+AMKKIEDNNTLVFIV ANKH
Sbjct: 85 SAMKKIEDNNTLVFIVDVKANKH 107
Score = 55.6 bits (128), Expect = 2e-07
Identities = 29/46 (63%), Positives = 31/46 (67%)
Frame = -2
Query: 161 KAAVKKLYDINVAKVNTLIRPDGKKKXXXXXXXXXXXXXXANKIGI 24
K AVKKLYDI+VAKVNTLIRPDG+KK ANKIGI
Sbjct: 110 KQAVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 115 bits (276), Expect = 2e-25
Identities = 53/83 (63%), Positives = 63/83 (75%)
Frame = -1
Query: 417 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSE 238
++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y II FPLT+E
Sbjct: 25 KKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIINFPLTTE 84
Query: 237 AAMKKIEDNNTLVFIVHTSANKH 169
+AMKKIEDNNTLVFIV ANKH
Sbjct: 85 SAMKKIEDNNTLVFIVDVKANKH 107
Score = 54.0 bits (124), Expect = 6e-07
Identities = 28/44 (63%), Positives = 30/44 (68%)
Frame = -2
Query: 155 AVKKLYDINVAKVNTLIRPDGKKKXXXXXXXXXXXXXXANKIGI 24
AVKKLYDI+VAKVNTLIRPDG+KK ANKIGI
Sbjct: 112 AVKKLYDIDVAKVNTLIRPDGEKKAYVRLAPDYDALDVANKIGI 155
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 107 bits (258), Expect = 3e-23
Identities = 50/83 (60%), Positives = 63/83 (75%)
Frame = -1
Query: 417 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSE 238
++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKFPLT+E
Sbjct: 25 KKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKFPLTTE 84
Query: 237 AAMKKIEDNNTLVFIVHTSANKH 169
AMKKI+DNNTLVF V ANKH
Sbjct: 85 FAMKKIKDNNTLVFTVDVKANKH 107
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 107 bits (258), Expect = 3e-23
Identities = 50/83 (60%), Positives = 63/83 (75%)
Frame = -1
Query: 417 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSE 238
++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKFPLT+E
Sbjct: 25 KKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKFPLTTE 84
Query: 237 AAMKKIEDNNTLVFIVHTSANKH 169
AMKKI+DNNTLVF V ANKH
Sbjct: 85 FAMKKIKDNNTLVFTVDVKANKH 107
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 107 bits (258), Expect = 3e-23
Identities = 50/83 (60%), Positives = 63/83 (75%)
Frame = -1
Query: 417 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSE 238
++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKFPLT+E
Sbjct: 25 KKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKFPLTTE 84
Query: 237 AAMKKIEDNNTLVFIVHTSANKH 169
AMKKI+DNNTLVF V ANKH
Sbjct: 85 FAMKKIKDNNTLVFTVDVKANKH 107
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 107 bits (258), Expect = 3e-23
Identities = 50/83 (60%), Positives = 63/83 (75%)
Frame = -1
Query: 417 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSE 238
++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKFPLT+E
Sbjct: 25 KKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKFPLTTE 84
Query: 237 AAMKKIEDNNTLVFIVHTSANKH 169
AMKKI+DNNTLVF V ANKH
Sbjct: 85 FAMKKIKDNNTLVFTVDVKANKH 107
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 93.9 bits (223), Expect = 6e-19
Identities = 41/83 (49%), Positives = 58/83 (69%)
Frame = -1
Query: 417 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSE 238
++ +KG H +K R S+ F+RPKT R P+YP KS P+RN++ Y +IKFPLT+E
Sbjct: 25 KKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKFPLTTE 84
Query: 237 AAMKKIEDNNTLVFIVHTSANKH 169
+A+K+ E+NNTL+F V ANKH
Sbjct: 85 SAVKRTEENNTLLFTVDVKANKH 107
Score = 45.2 bits (102), Expect = 3e-04
Identities = 25/46 (54%), Positives = 28/46 (60%)
Frame = -2
Query: 161 KAAVKKLYDINVAKVNTLIRPDGKKKXXXXXXXXXXXXXXANKIGI 24
K AVKKLYD +VA+V TLI PDG+KK ANKIGI
Sbjct: 110 KQAVKKLYDGDVAEVTTLIPPDGEKKACVRLAPDYDALDVANKIGI 155
>BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein.
Length = 121
Score = 91.9 bits (218), Expect = 2e-18
Identities = 41/65 (63%), Positives = 51/65 (78%)
Frame = -1
Query: 363 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHT 184
S+ FRRPKT R P+YP+KS P+RN++ Y IIKFPLT+E+A+KKIE+NNTLVF V
Sbjct: 2 SLTFRRPKTLRLRRQPRYPQKSTPRRNKLGHYAIIKFPLTTESAVKKIEENNTLVFTVDV 61
Query: 183 SANKH 169
ANKH
Sbjct: 62 KANKH 66
Score = 37.9 bits (84), Expect = 0.040
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -2
Query: 161 KAAVKKLYDINVAKVNTLIRPDGKKK 84
+ AVKKLYD +VAKV TLI PD +KK
Sbjct: 69 RQAVKKLYDSDVAKVTTLICPDKEKK 94
>BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7
protein protein.
Length = 121
Score = 91.5 bits (217), Expect = 3e-18
Identities = 41/65 (63%), Positives = 50/65 (76%)
Frame = -1
Query: 363 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHT 184
S+ FRRPKT R P+YPRKS P+RN++ Y IIKFPL +E+A+KKIE+NNTLVF V
Sbjct: 2 SLTFRRPKTLRLRRQPRYPRKSTPRRNKLGHYAIIKFPLATESAVKKIEENNTLVFTVDV 61
Query: 183 SANKH 169
ANKH
Sbjct: 62 KANKH 66
Score = 35.9 bits (79), Expect = 0.16
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -2
Query: 161 KAAVKKLYDINVAKVNTLIRPDGKKK 84
+ AVKKLYD +VAKV TLI PD + K
Sbjct: 69 RQAVKKLYDSDVAKVTTLICPDKENK 94
>AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 5e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = +2
Query: 233 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 412
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 413 L*ALSALVTGF 445
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 5e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = +2
Query: 233 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 412
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 413 L*ALSALVTGF 445
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 5e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = +2
Query: 233 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 412
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 413 L*ALSALVTGF 445
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 5e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = +2
Query: 233 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 412
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 413 L*ALSALVTGF 445
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 5e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = +2
Query: 233 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 412
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 413 L*ALSALVTGF 445
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 5e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = +2
Query: 233 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 412
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 413 L*ALSALVTGF 445
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 5e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = +2
Query: 233 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 412
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 413 L*ALSALVTGF 445
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibility
complex class I F protein.
Length = 123
Score = 47.2 bits (107), Expect = 7e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = +2
Query: 233 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 412
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 413 L*ALSALVTGF 445
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibility
complex class I F protein.
Length = 442
Score = 47.2 bits (107), Expect = 7e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = +2
Query: 233 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 412
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 413 L*ALSALVTGF 445
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein.
Length = 460
Score = 47.2 bits (107), Expect = 7e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = +2
Query: 233 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 412
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 364 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 423
Query: 413 L*ALSALVTGF 445
AL +L GF
Sbjct: 424 FLALQSLRFGF 434
>BC060042-1|AAH60042.1| 81|Homo sapiens LOC649946 protein protein.
Length = 81
Score = 42.7 bits (96), Expect = 0.001
Identities = 24/42 (57%), Positives = 27/42 (64%)
Frame = -2
Query: 149 KKLYDINVAKVNTLIRPDGKKKXXXXXXXXXXXXXXANKIGI 24
KKLYD +VAKVNTLIRPDG+K+ ANKIGI
Sbjct: 23 KKLYDTDVAKVNTLIRPDGEKE-HVRLAPDYNALDVANKIGI 63
Score = 35.5 bits (78), Expect = 0.21
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -1
Query: 231 MKKIEDNNTLVFIVHTSANKH 169
MKK EDNN LVF V+ ANKH
Sbjct: 1 MKKTEDNNALVFTVNVKANKH 21
>BC017930-1|AAH17930.1| 81|Homo sapiens LOC649946 protein protein.
Length = 81
Score = 42.7 bits (96), Expect = 0.001
Identities = 24/42 (57%), Positives = 27/42 (64%)
Frame = -2
Query: 149 KKLYDINVAKVNTLIRPDGKKKXXXXXXXXXXXXXXANKIGI 24
KKLYD +VAKVNTLIRPDG+K+ ANKIGI
Sbjct: 23 KKLYDTDVAKVNTLIRPDGEKE-HVRLAPDYNALDVANKIGI 63
Score = 35.5 bits (78), Expect = 0.21
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -1
Query: 231 MKKIEDNNTLVFIVHTSANKH 169
MKK EDNN LVF V+ ANKH
Sbjct: 1 MKKTEDNNALVFTVNVKANKH 21
>AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens
cDNA FLJ43284 fis, clone LYMPB2000083, highly similar
to HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ALPHA CHAIN F
PRECURSOR. ).
Length = 349
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = +2
Query: 233 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 373
A S V GNLM+ S FLLG F GYLGCL +VLG RK L +
Sbjct: 260 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 306
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,572,381
Number of Sequences: 237096
Number of extensions: 1538901
Number of successful extensions: 7383
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 7243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7383
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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