Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_F18
         (609 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CB3FB Cluster: hypothetical protein TTHERM_0047...    36   0.75 
UniRef50_O96216 Cluster: Putative uncharacterized protein PFB061...    35   1.3  

>UniRef50_UPI00006CB3FB Cluster: hypothetical protein
           TTHERM_00474800; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00474800 - Tetrahymena
           thermophila SB210
          Length = 1271

 Score = 35.9 bits (79), Expect = 0.75
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = -1

Query: 180 FESAGQCSNNYETKICQLRKLGGGLE*LHKYGTEMFQYEMESQPKDDCLQGTERHDDK 7
           +E   QC NN   KI  L K     + L  Y   + Q   +SQ  D+  Q  ++H +K
Sbjct: 695 YEEVSQCQNNLYNKIASLNKHNNANQ-LQNYRNNLGQESQQSQQNDNLSQNFKKHKEK 751


>UniRef50_O96216 Cluster: Putative uncharacterized protein PFB0615c;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFB0615c - Plasmodium falciparum
            (isolate 3D7)
          Length = 2385

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = +2

Query: 194  DIYKRDKVLGYVAILKVITNTVQGKYCN*QINHNCFKNKYLVHN-IF*IFT*FEMTLNK* 370
            ++ K DK+   +    VIT   + K  N +I +N   N    +N +F   + +E+ LNK 
Sbjct: 1162 NMIKEDKLEEKINEDFVITEEGEKK-SNKKIKNNTQHNDNNNNNDVFICNSLYELLLNKE 1220

Query: 371  TLFGLNI*HDKLKYINKFKH 430
              F LNI H KLKYIN+  H
Sbjct: 1221 KSFFLNIKHGKLKYINERMH 1240


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,256,679
Number of Sequences: 1657284
Number of extensions: 9588533
Number of successful extensions: 18483
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 17561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18426
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43562448615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)