Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_F18
         (609 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL590095-1|CAH73318.1|  894|Homo sapiens Scm-like with four mbt ...    32   1.8  
AL158046-3|CAI19142.1|  894|Homo sapiens Scm-like with four mbt ...    32   1.8  
AL139125-3|CAI18944.1|  894|Homo sapiens Scm-like with four mbt ...    32   1.8  
AL138771-1|CAI21746.1|  894|Homo sapiens Scm-like with four mbt ...    32   1.8  
AB046837-1|BAB13443.1|  904|Homo sapiens KIAA1617 protein protein.     32   1.8  
BC068491-1|AAH68491.1|  873|Homo sapiens KIAA1622 protein.             29   9.7  
AB046842-1|BAB13448.1|  892|Homo sapiens KIAA1622 protein protein.     29   9.7  

>AL590095-1|CAH73318.1|  894|Homo sapiens Scm-like with four mbt
           domains 2 protein.
          Length = 894

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +2

Query: 248 TNTVQGKYCN*Q--INHNCFKNKYL 316
           T TV GKYC  Q  INH CF   YL
Sbjct: 519 TGTVNGKYCCPQLFINHRCFSGPYL 543


>AL158046-3|CAI19142.1|  894|Homo sapiens Scm-like with four mbt
           domains 2 protein.
          Length = 894

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +2

Query: 248 TNTVQGKYCN*Q--INHNCFKNKYL 316
           T TV GKYC  Q  INH CF   YL
Sbjct: 519 TGTVNGKYCCPQLFINHRCFSGPYL 543


>AL139125-3|CAI18944.1|  894|Homo sapiens Scm-like with four mbt
           domains 2 protein.
          Length = 894

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +2

Query: 248 TNTVQGKYCN*Q--INHNCFKNKYL 316
           T TV GKYC  Q  INH CF   YL
Sbjct: 519 TGTVNGKYCCPQLFINHRCFSGPYL 543


>AL138771-1|CAI21746.1|  894|Homo sapiens Scm-like with four mbt
           domains 2 protein.
          Length = 894

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +2

Query: 248 TNTVQGKYCN*Q--INHNCFKNKYL 316
           T TV GKYC  Q  INH CF   YL
Sbjct: 519 TGTVNGKYCCPQLFINHRCFSGPYL 543


>AB046837-1|BAB13443.1|  904|Homo sapiens KIAA1617 protein protein.
          Length = 904

 Score = 31.9 bits (69), Expect = 1.8
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +2

Query: 248 TNTVQGKYCN*Q--INHNCFKNKYL 316
           T TV GKYC  Q  INH CF   YL
Sbjct: 529 TGTVNGKYCCPQLFINHRCFSGPYL 553


>BC068491-1|AAH68491.1|  873|Homo sapiens KIAA1622 protein.
          Length = 873

 Score = 29.5 bits (63), Expect = 9.7
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = -2

Query: 239 LKWRRNQELYLVYICLDNFYSSRQDNVQTITRLKYAS*EN*VVV*NNCTSMELKCFNMKW 60
           LKWR +++L   Y CL +  SS Q   + + R+      N V+      S  L C  +++
Sbjct: 498 LKWRTHEKLLQKYACLPHVISSDQIYYRFLQRMFTIMMTNNVLPVQKAASRTL-CIFLRY 556

Query: 59  NR 54
           NR
Sbjct: 557 NR 558


>AB046842-1|BAB13448.1|  892|Homo sapiens KIAA1622 protein protein.
          Length = 892

 Score = 29.5 bits (63), Expect = 9.7
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = -2

Query: 239 LKWRRNQELYLVYICLDNFYSSRQDNVQTITRLKYAS*EN*VVV*NNCTSMELKCFNMKW 60
           LKWR +++L   Y CL +  SS Q   + + R+      N V+      S  L C  +++
Sbjct: 517 LKWRTHEKLLQKYACLPHVISSDQIYYRFLQRMFTIMMTNNVLPVQKAASRTL-CIFLRY 575

Query: 59  NR 54
           NR
Sbjct: 576 NR 577


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,162,537
Number of Sequences: 237096
Number of extensions: 1449183
Number of successful extensions: 2092
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2092
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)