Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_F18
         (609 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93378-5|CAB07584.3| 1229|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AJ811574-1|CAH18872.1| 1229|Caenorhabditis elegans putative treh...    30   1.5  
AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans trehalose-6-p...    30   1.5  
Z81078-5|CAB03078.2|  722|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z75535-4|CAA99828.2|  722|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U80024-7|AAW88409.1|  295|Caenorhabditis elegans Serpentine rece...    28   6.0  
Z22174-4|CAA80129.2|  361|Caenorhabditis elegans Hypothetical pr...    27   7.9  

>Z93378-5|CAB07584.3| 1229|Caenorhabditis elegans Hypothetical
           protein F19H8.1 protein.
          Length = 1229

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -2

Query: 596 LVLIYFGVYVLLYF*FADIFSITNRAFTC 510
           LV  YFG   ++Y    DI+SITN  +TC
Sbjct: 511 LVQHYFGTAKIVYDNKMDIYSITNEGWTC 539


>AJ811574-1|CAH18872.1| 1229|Caenorhabditis elegans putative
           trehalose 6-phosphatesynthase protein.
          Length = 1229

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -2

Query: 596 LVLIYFGVYVLLYF*FADIFSITNRAFTC 510
           LV  YFG   ++Y    DI+SITN  +TC
Sbjct: 511 LVQHYFGTAKIVYDNKMDIYSITNEGWTC 539


>AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans
           trehalose-6-phosphate synthase protein.
          Length = 1230

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = -2

Query: 596 LVLIYFGVYVLLYF*FADIFSITNRAFTC 510
           LV  YFG   ++Y    DI+SITN  +TC
Sbjct: 511 LVQHYFGTAKIVYDNKMDIYSITNEGWTC 539


>Z81078-5|CAB03078.2|  722|Caenorhabditis elegans Hypothetical
           protein F14B4.1 protein.
          Length = 722

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -1

Query: 261 CTVFVMTFKMAT*PRTLSRLYMSRQFLFESAGQCSNNYET--KICQLRKLG 115
           CT    T+K+AT  +T  R+  S  +LF + GQ   N  T  K  QL++ G
Sbjct: 298 CTCDPRTYKLATDNKTCERIDQSPMWLFFAHGQSVWNISTDGKSFQLQRAG 348


>Z75535-4|CAA99828.2|  722|Caenorhabditis elegans Hypothetical
           protein F14B4.1 protein.
          Length = 722

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = -1

Query: 261 CTVFVMTFKMAT*PRTLSRLYMSRQFLFESAGQCSNNYET--KICQLRKLG 115
           CT    T+K+AT  +T  R+  S  +LF + GQ   N  T  K  QL++ G
Sbjct: 298 CTCDPRTYKLATDNKTCERIDQSPMWLFFAHGQSVWNISTDGKSFQLQRAG 348


>U80024-7|AAW88409.1|  295|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 7 protein.
          Length = 295

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +2

Query: 224 YVAILKVITNTVQGKYCN*QINHNCFKNKYLVHNIF*IFT*FEM 355
           Y   L V+ N + G Y    I ++CF  ++  H  F ++  F +
Sbjct: 51  YRLFLDVVYNVLAGAYMTFSILYSCFTEEFREHQAFIVYIGFPL 94


>Z22174-4|CAA80129.2|  361|Caenorhabditis elegans Hypothetical
           protein K01B6.2 protein.
          Length = 361

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 223 TKNFISFIYVSTIFIRVGRTMFKQLRD*NMPVKKIRW 113
           T+ F +F+  S IF+  G + F  +RD  M     RW
Sbjct: 129 TERFTTFLICSIIFVSFGFSWFLVIRDCQMGFSIPRW 165


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,493,354
Number of Sequences: 27780
Number of extensions: 251586
Number of successful extensions: 536
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)