Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F17
(821 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 24 1.5
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 1.5
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 1.5
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 24 1.5
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 23 3.4
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 23 3.4
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 23 3.4
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 6.0
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 6.0
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 22 6.0
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 22 7.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 7.9
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 611 KNRQTREHLLVFFT 570
KN QTREH L+ FT
Sbjct: 129 KNGQTREHALLAFT 142
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 611 KNRQTREHLLVFFT 570
KN QTREH L+ FT
Sbjct: 56 KNGQTREHALLAFT 69
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 611 KNRQTREHLLVFFT 570
KN QTREH L+ FT
Sbjct: 72 KNGQTREHALLAFT 85
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1
Query: 611 KNRQTREHLLVFFT 570
KN QTREH L+ FT
Sbjct: 129 KNGQTREHALLAFT 142
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 23.0 bits (47), Expect = 3.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 179 WCTGLLHLSSWFNWHLGKFC*SHICCHCQDIC 84
WC G + SS N LG+F + CC D+C
Sbjct: 36 WC-GHGNKSSGPN-ELGRFKHTDACCRTHDMC 65
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 23.0 bits (47), Expect = 3.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 179 WCTGLLHLSSWFNWHLGKFC*SHICCHCQDIC 84
WC G + SS N LG+F + CC D+C
Sbjct: 41 WC-GHGNKSSGPN-ELGRFKHTDACCRTHDMC 70
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 23.0 bits (47), Expect = 3.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1
Query: 179 WCTGLLHLSSWFNWHLGKFC*SHICCHCQDIC 84
WC G + SS N LG+F + CC D+C
Sbjct: 41 WC-GHGNKSSGPN-ELGRFKHTDACCRTHDMC 70
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 22.2 bits (45), Expect = 6.0
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 429 TVILVWV*SAARKSPL 382
T++LVW SAA SP+
Sbjct: 306 TILLVWAISAAIGSPI 321
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 6.0
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 659 ERVGSCHQTRPSCSRRKNRQTRE 591
+ S + SCSR +NR+ RE
Sbjct: 225 QHTSSRYSRERSCSRDRNREYRE 247
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 22.2 bits (45), Expect = 6.0
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = +2
Query: 578 KQVNALEFVDFSFANKTAEFGDRNPLFLVF 667
+ +++ + V++ T GD P+FL F
Sbjct: 355 QDISSPDAVEYGIIGPTTCMGDHKPVFLEF 384
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.8 bits (44), Expect = 7.9
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -2
Query: 286 CKVTGKCGSVTVRLIPAPRGT 224
C + G CG + + P+GT
Sbjct: 75 CPICGACGDIAHTVKYCPKGT 95
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 7.9
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = -1
Query: 647 SCHQTRP-SCSRRKNRQTRE 591
S H +R SCSR +NR+ +E
Sbjct: 228 SSHYSRERSCSRDRNREYKE 247
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,438
Number of Sequences: 438
Number of extensions: 5421
Number of successful extensions: 49
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -