Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_F14
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   1.0  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    23   2.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.4  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   4.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   7.2  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 306 EGCTVFTKQSVTKNGKGMFKWLSN 377
           EGC  F ++S+TKN     K+ +N
Sbjct: 206 EGCKGFFRRSITKNAVYQCKYGNN 229


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 210 LLYDLLNASTKKSRVNY 260
           +LY LL   ++KSR+NY
Sbjct: 45  VLYTLLFGRSRKSRMNY 61


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -1

Query: 130 LTYLLVCYFFCTSMDIFICLVSFF--FLIY 47
           L +LL  Y+F   +   +C+  F+  F+I+
Sbjct: 127 LLFLLCIYYFVVPLFFLLCIYYFYCAFIIF 156



 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 130 LTYLLVCYFFCTSMDIFICLVSF 62
           L +LL  Y+F  ++ I +C+  F
Sbjct: 279 LLFLLCIYYFYCALIILLCIYYF 301



 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -1

Query: 124 YLLVCYFFCTSMDIFICLVSFFF 56
           +LL  Y+F  +  I +C+  F++
Sbjct: 96  FLLCTYYFYYAFIILLCVYYFYY 118


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 145 GNKSILTYLLVCYFFCTSMDIFIC 74
           GN ++L  LLV     + M+ FIC
Sbjct: 63  GNSAVLVALLVSKSRKSRMNFFIC 86


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 106 FFCTSMDIFIC 74
           FFCT++ IF C
Sbjct: 67  FFCTALVIFYC 77


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 106 FFCTSMDIFIC 74
           FFCT++ IF C
Sbjct: 300 FFCTALVIFYC 310


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 106 FFCTSMDIFIC 74
           FFCT++ IF C
Sbjct: 300 FFCTALVIFYC 310


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 234 STKKSRVNYNPRNPSFFCEICN 299
           S+    V  + R+  F CE+CN
Sbjct: 120 SSVSPEVKDSSRDRPFTCEVCN 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,480
Number of Sequences: 336
Number of extensions: 2555
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)