Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_F14
         (562 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_54416| Best HMM Match : rve (HMM E-Value=1.4e-27)                   29   2.0  
SB_20205| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   7.9  

>SB_54416| Best HMM Match : rve (HMM E-Value=1.4e-27)
          Length = 1068

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 14/57 (24%), Positives = 27/57 (47%)
 Frame = +3

Query: 240 KKSRVNYNPRNPSFFCEICNFKEGCTVFTKQSVTKNGKGMFKWLSNNAYEIQCAIFN 410
           K    N+      F+    N+   C + TK+ +T++ K + KW+ +N  E+   + N
Sbjct: 256 KAKGTNFQVEESQFYVG-ANYINICHLHTKEWLTEDDKKLKKWIQDNFAEVTQKVIN 311


>SB_20205| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 259

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +3

Query: 123 YVNMDLLPYLSTLNFNSIS*NYCCNVNNIL 212
           Y+N+D  PYL+T N+N I  ++ C  N  L
Sbjct: 33  YLNLD--PYLATKNYNIIGGDFNCITNTRL 60


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,332,468
Number of Sequences: 59808
Number of extensions: 261580
Number of successful extensions: 506
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1312894764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)