Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_F14
         (562 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81562-3|CAB04557.1|  352|Caenorhabditis elegans Hypothetical pr...    31   0.43 
AL021501-2|CAA16415.2|  356|Caenorhabditis elegans Hypothetical ...    31   0.43 
Z99281-3|CAB16508.1|  482|Caenorhabditis elegans Hypothetical pr...    29   1.7  
AC024751-4|AAK21505.1|  425|Caenorhabditis elegans Hypothetical ...    29   1.7  
AF036688-8|AAB88314.2|  482|Caenorhabditis elegans Hypothetical ...    29   3.0  
AF025460-7|AAF02170.1|  119|Caenorhabditis elegans Hypothetical ...    27   7.0  
Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U29381-5|AAA68753.2|  229|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>Z81562-3|CAB04557.1|  352|Caenorhabditis elegans Hypothetical
           protein K03D7.6 protein.
          Length = 352

 Score = 31.5 bits (68), Expect = 0.43
 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
 Frame = -1

Query: 139 KSILTYLLVCYFFCTSMDIFICLVS--FFFL 53
           K++ T LL+ + FC  +D+F+C V   +FFL
Sbjct: 60  KNVKTSLLINHLFCALLDLFLCTVCTVYFFL 90


>AL021501-2|CAA16415.2|  356|Caenorhabditis elegans Hypothetical
           protein Y61B8A.2 protein.
          Length = 356

 Score = 31.5 bits (68), Expect = 0.43
 Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
 Frame = -1

Query: 139 KSILTYLLVCYFFCTSMDIFICLVS--FFFL 53
           K++ T LLV +FFC  +D+ +C +S  +FFL
Sbjct: 60  KNVRTPLLVNHFFCAFLDLTLCTLSTVYFFL 90


>Z99281-3|CAB16508.1|  482|Caenorhabditis elegans Hypothetical
           protein Y57G11C.6 protein.
          Length = 482

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +3

Query: 243 KSRVNYNPRNPSFFCEICNFKEGCTVFTKQSVTKNGKGMFKWLSNNAY 386
           KS  +  PR    FC+ C+       F K+ VTK  +G  K    N Y
Sbjct: 407 KSIRSQRPRAVDSFCQYCSLYISLLYFIKKKVTKPAEGDKKSTPTNKY 454


>AC024751-4|AAK21505.1|  425|Caenorhabditis elegans Hypothetical
           protein Y18H1A.1 protein.
          Length = 425

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 17/52 (32%), Positives = 23/52 (44%)
 Frame = +3

Query: 231 ASTKKSRVNYNPRNPSFFCEICNFKEGCTVFTKQSVTKNGKGMFKWLSNNAY 386
           A   KS  +  PR    FC+ C+       F K+ VTK  +G  K   +N Y
Sbjct: 346 ADIVKSIRSQRPRAVDSFCQYCSLYISLLYFIKKKVTKPAEGDKKPTLSNKY 397


>AF036688-8|AAB88314.2|  482|Caenorhabditis elegans Hypothetical
           protein C24D10.1 protein.
          Length = 482

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 17/52 (32%), Positives = 20/52 (38%)
 Frame = +3

Query: 231 ASTKKSRVNYNPRNPSFFCEICNFKEGCTVFTKQSVTKNGKGMFKWLSNNAY 386
           A   KS     PR    FC+ C+       F K+ VTK   G  K    N Y
Sbjct: 403 ADIVKSIRTQRPRAVDSFCQYCSLYISLLYFIKKKVTKPADGDKKSTPTNKY 454


>AF025460-7|AAF02170.1|  119|Caenorhabditis elegans Hypothetical
           protein F53A3.7 protein.
          Length = 119

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 276 SFFCEICNFKEGCTVFTKQSVTK 344
           S+ C++CN +EG   F K S  K
Sbjct: 38  SYTCKVCNSREGPKTFAKSSYEK 60


>Z50070-2|CAB54253.1| 1069|Caenorhabditis elegans Hypothetical
           protein F43G6.1b protein.
          Length = 1069

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +3

Query: 261 NPRNPSFFCEICNFKEGCTVF--TKQSVTKNGKGMFKWLSNNAYEIQ 395
           +PR  S FC+ C+ K  C+ +  T+++ +K+   M  +  N    ++
Sbjct: 413 DPRQDSRFCDKCDHKTMCSFYQKTEENFSKSNDKMKNFAENEMAHLE 459


>Z50070-1|CAA90399.1| 1105|Caenorhabditis elegans Hypothetical
           protein F43G6.1a protein.
          Length = 1105

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/47 (25%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
 Frame = +3

Query: 261 NPRNPSFFCEICNFKEGCTVF--TKQSVTKNGKGMFKWLSNNAYEIQ 395
           +PR  S FC+ C+ K  C+ +  T+++ +K+   M  +  N    ++
Sbjct: 449 DPRQDSRFCDKCDHKTMCSFYQKTEENFSKSNDKMKNFAENEMAHLE 495


>U29381-5|AAA68753.2|  229|Caenorhabditis elegans Hypothetical
           protein F35D11.7 protein.
          Length = 229

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
 Frame = +3

Query: 165 FNSIS*NYCCNV-NNILLYDLLNASTKKSRVNYNPRNPSFFC-------EICNFKEGCTV 320
           FNS      CN+ NN+ L+D +N+ T     +Y  R P+ +         I  F   C V
Sbjct: 117 FNSTEEKGDCNIKNNLFLFDDVNSDTTFMLSHYKRRLPAAYMVHQADNGPIFRFAADCIV 176

Query: 321 FTKQSVTKNG 350
                V  NG
Sbjct: 177 LKSGIVKANG 186


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,065,611
Number of Sequences: 27780
Number of extensions: 215373
Number of successful extensions: 571
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)