Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_F13
         (633 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_8661| Best HMM Match : Band_7 (HMM E-Value=3.7e-16)                138   3e-33
SB_13169| Best HMM Match : Band_7 (HMM E-Value=1.4013e-45)             85   5e-17
SB_31694| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.2  

>SB_8661| Best HMM Match : Band_7 (HMM E-Value=3.7e-16)
          Length = 500

 Score =  138 bits (334), Expect = 3e-33
 Identities = 72/108 (66%), Positives = 81/108 (75%)
 Frame = -3

Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
           MYR+LG D+DE+ LPSI NEVLKSVVA+FNASQLIT RQQVSLLIRR+L+ERA DF IIL
Sbjct: 379 MYRKLGLDFDERVLPSIMNEVLKSVVAQFNASQLITMRQQVSLLIRRQLMERARDFYIIL 438

Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQ 302
           DDVS+T+LSFGKEYT                    E+A QERQQKIVQ
Sbjct: 439 DDVSITDLSFGKEYTSAIEAKQVAQQEAQRAQFIVEKAIQERQQKIVQ 486


>SB_13169| Best HMM Match : Band_7 (HMM E-Value=1.4013e-45)
          Length = 242

 Score = 85.0 bits (201), Expect = 5e-17
 Identities = 38/67 (56%), Positives = 52/67 (77%)
 Frame = -3

Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
           +Y  LG DYDE+ LPSI  EVLK+VVA+F+A +LITQR+ VS  ++ +L ERA+ F ++L
Sbjct: 106 IYMNLGEDYDERVLPSITTEVLKAVVAQFDAGELITQREMVSQKVQEDLTERASSFGLVL 165

Query: 445 DDVSLTE 425
           DD+SL E
Sbjct: 166 DDISLAE 172


>SB_31694| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 288

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 435 DTSSRIILKSAARSTNSLLISRDTC*RCVISWEALNLATTDFRTSL 572
           DTS   +L     STNSL    DTC   ++   ++N    D+ TS+
Sbjct: 156 DTSMNSLLHDYDTSTNSLPYDYDTCTHSLLYDISMNSLLYDYDTSM 201


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,306,649
Number of Sequences: 59808
Number of extensions: 232666
Number of successful extensions: 381
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1584657875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)