Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F13
(633 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U72511-1|AAC51639.1| 211|Homo sapiens B-cell receptor associate... 178 2e-44
U47924-19|AAB51324.1| 299|Homo sapiens B-cell receptor associat... 178 2e-44
BC110322-1|AAI10323.1| 299|Homo sapiens prohibitin 2 protein. 178 2e-44
BC014766-1|AAH14766.1| 299|Homo sapiens prohibitin 2 protein. 178 2e-44
AF178980-1|AAF44345.1| 299|Homo sapiens D-prohibitin protein. 178 2e-44
AF150962-1|AAD38042.1| 299|Homo sapiens repressor of estrogen r... 178 2e-44
AF126021-1|AAF17231.1| 299|Homo sapiens B-cell receptor-associa... 178 2e-44
AK223181-1|BAD96901.1| 272|Homo sapiens prohibitin variant prot... 120 6e-27
S85655-1|AAB21614.1| 272|Homo sapiens prohibitin protein. 118 2e-26
L14272-1|AAO18340.1| 272|Homo sapiens prohibitin protein. 118 2e-26
BT007411-1|AAP36079.1| 272|Homo sapiens prohibitin protein. 118 2e-26
BC095460-1|AAH95460.1| 272|Homo sapiens prohibitin protein. 118 2e-26
BC013401-1|AAH13401.1| 272|Homo sapiens prohibitin protein. 118 2e-26
AY577780-1|AAS88903.1| 272|Homo sapiens prohibitin protein. 118 2e-26
CR541706-1|CAG46507.1| 272|Homo sapiens PHB protein. 116 5e-26
BC014228-1|AAH14228.1| 201|Homo sapiens LOC494150 protein protein. 89 2e-17
BC005085-1|AAH05085.1| 156|Homo sapiens ZNF607 protein protein. 55 2e-07
AF279895-1|AAK07552.1| 69|Homo sapiens PNAS-141 protein. 51 4e-06
BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongatio... 31 2.6
AY540752-1|AAT44402.1| 154|Homo sapiens rhabdomyosarcoma antige... 31 2.6
AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongatio... 31 2.6
AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongatio... 31 2.6
AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongatio... 31 2.6
>U72511-1|AAC51639.1| 211|Homo sapiens B-cell receptor associated
protein protein.
Length = 211
Score = 178 bits (433), Expect = 2e-44
Identities = 91/155 (58%), Positives = 109/155 (70%)
Frame = -3
Query: 628 TMYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNII 449
+MY++LG DY+E+ LPSI NEVLKSVVAKFNASQLITQR QVSLLIRREL ERA DF++I
Sbjct: 31 SMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLI 90
Query: 448 LDDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQXXXXXXXXXXX 269
LDDV++TELSF +EYT E+AKQE++QKIVQ
Sbjct: 91 LDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKML 150
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFL 164
NPGY+KLRKIRAAQ+IS+ IA SQNR++L
Sbjct: 151 GEALSKNPGYIKLRKIRAAQNISKTIATSQNRIYL 185
>U47924-19|AAB51324.1| 299|Homo sapiens B-cell receptor associated
protein protein.
Length = 299
Score = 178 bits (433), Expect = 2e-44
Identities = 91/155 (58%), Positives = 109/155 (70%)
Frame = -3
Query: 628 TMYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNII 449
+MY++LG DY+E+ LPSI NEVLKSVVAKFNASQLITQR QVSLLIRREL ERA DF++I
Sbjct: 119 SMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLI 178
Query: 448 LDDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQXXXXXXXXXXX 269
LDDV++TELSF +EYT E+AKQE++QKIVQ
Sbjct: 179 LDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKML 238
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFL 164
NPGY+KLRKIRAAQ+IS+ IA SQNR++L
Sbjct: 239 GEALSKNPGYIKLRKIRAAQNISKTIATSQNRIYL 273
>BC110322-1|AAI10323.1| 299|Homo sapiens prohibitin 2 protein.
Length = 299
Score = 178 bits (433), Expect = 2e-44
Identities = 91/155 (58%), Positives = 109/155 (70%)
Frame = -3
Query: 628 TMYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNII 449
+MY++LG DY+E+ LPSI NEVLKSVVAKFNASQLITQR QVSLLIRREL ERA DF++I
Sbjct: 119 SMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLI 178
Query: 448 LDDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQXXXXXXXXXXX 269
LDDV++TELSF +EYT E+AKQE++QKIVQ
Sbjct: 179 LDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKML 238
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFL 164
NPGY+KLRKIRAAQ+IS+ IA SQNR++L
Sbjct: 239 GEALSKNPGYIKLRKIRAAQNISKTIATSQNRIYL 273
>BC014766-1|AAH14766.1| 299|Homo sapiens prohibitin 2 protein.
Length = 299
Score = 178 bits (433), Expect = 2e-44
Identities = 91/155 (58%), Positives = 109/155 (70%)
Frame = -3
Query: 628 TMYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNII 449
+MY++LG DY+E+ LPSI NEVLKSVVAKFNASQLITQR QVSLLIRREL ERA DF++I
Sbjct: 119 SMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLI 178
Query: 448 LDDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQXXXXXXXXXXX 269
LDDV++TELSF +EYT E+AKQE++QKIVQ
Sbjct: 179 LDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKML 238
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFL 164
NPGY+KLRKIRAAQ+IS+ IA SQNR++L
Sbjct: 239 GEALSKNPGYIKLRKIRAAQNISKTIATSQNRIYL 273
>AF178980-1|AAF44345.1| 299|Homo sapiens D-prohibitin protein.
Length = 299
Score = 178 bits (433), Expect = 2e-44
Identities = 91/155 (58%), Positives = 109/155 (70%)
Frame = -3
Query: 628 TMYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNII 449
+MY++LG DY+E+ LPSI NEVLKSVVAKFNASQLITQR QVSLLIRREL ERA DF++I
Sbjct: 119 SMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLI 178
Query: 448 LDDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQXXXXXXXXXXX 269
LDDV++TELSF +EYT E+AKQE++QKIVQ
Sbjct: 179 LDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKML 238
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFL 164
NPGY+KLRKIRAAQ+IS+ IA SQNR++L
Sbjct: 239 GEALSKNPGYIKLRKIRAAQNISKTIATSQNRIYL 273
>AF150962-1|AAD38042.1| 299|Homo sapiens repressor of estrogen
receptor activity protein.
Length = 299
Score = 178 bits (433), Expect = 2e-44
Identities = 91/155 (58%), Positives = 109/155 (70%)
Frame = -3
Query: 628 TMYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNII 449
+MY++LG DY+E+ LPSI NEVLKSVVAKFNASQLITQR QVSLLIRREL ERA DF++I
Sbjct: 119 SMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLI 178
Query: 448 LDDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQXXXXXXXXXXX 269
LDDV++TELSF +EYT E+AKQE++QKIVQ
Sbjct: 179 LDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKML 238
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFL 164
NPGY+KLRKIRAAQ+IS+ IA SQNR++L
Sbjct: 239 GEALSKNPGYIKLRKIRAAQNISKTIATSQNRIYL 273
>AF126021-1|AAF17231.1| 299|Homo sapiens B-cell receptor-associated
protein BAP37 protein.
Length = 299
Score = 178 bits (433), Expect = 2e-44
Identities = 91/155 (58%), Positives = 109/155 (70%)
Frame = -3
Query: 628 TMYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNII 449
+MY++LG DY+E+ LPSI NEVLKSVVAKFNASQLITQR QVSLLIRREL ERA DF++I
Sbjct: 119 SMYQRLGLDYEERVLPSIVNEVLKSVVAKFNASQLITQRAQVSLLIRRELTERAKDFSLI 178
Query: 448 LDDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQXXXXXXXXXXX 269
LDDV++TELSF +EYT E+AKQE++QKIVQ
Sbjct: 179 LDDVAITELSFSREYTAAVEAKQVAQQEAQRAQFLVEKAKQEQRQKIVQAEGEAEAAKML 238
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFL 164
NPGY+KLRKIRAAQ+IS+ IA SQNR++L
Sbjct: 239 GEALSKNPGYIKLRKIRAAQNISKTIATSQNRIYL 273
>AK223181-1|BAD96901.1| 272|Homo sapiens prohibitin variant
protein.
Length = 272
Score = 120 bits (288), Expect = 6e-27
Identities = 63/160 (39%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
++ +G DYDE+ LPSI E+LKSVVA+F+A +LITQR+ VS + +L ERAA F +IL
Sbjct: 106 IFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLIL 165
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQX-XXXXXXXXXX 269
DDVSLT L+FGKE+T E+A+Q+++ I+
Sbjct: 166 DDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIA 225
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFLPWKQS 149
G +KLRK+ AA+ I+ +++S+N +LP QS
Sbjct: 226 NSLATAGDGLIKLRKLEAAEDIAYQLSRSRNITYLPAGQS 265
>S85655-1|AAB21614.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 118 bits (284), Expect = 2e-26
Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
++ +G DYDE+ LPSI E+LKSVVA+F+A +LITQR+ VS + +L ERAA F +IL
Sbjct: 106 IFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLIL 165
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQX-XXXXXXXXXX 269
DDVSLT L+FGKE+T E+A+Q+++ I+
Sbjct: 166 DDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIA 225
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFLPWKQS 149
G ++LRK+ AA+ I+ +++S+N +LP QS
Sbjct: 226 NSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPAGQS 265
>L14272-1|AAO18340.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 118 bits (284), Expect = 2e-26
Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
++ +G DYDE+ LPSI E+LKSVVA+F+A +LITQR+ VS + +L ERAA F +IL
Sbjct: 106 IFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLIL 165
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQX-XXXXXXXXXX 269
DDVSLT L+FGKE+T E+A+Q+++ I+
Sbjct: 166 DDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIA 225
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFLPWKQS 149
G ++LRK+ AA+ I+ +++S+N +LP QS
Sbjct: 226 NSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPAGQS 265
>BT007411-1|AAP36079.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 118 bits (284), Expect = 2e-26
Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
++ +G DYDE+ LPSI E+LKSVVA+F+A +LITQR+ VS + +L ERAA F +IL
Sbjct: 106 IFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLIL 165
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQX-XXXXXXXXXX 269
DDVSLT L+FGKE+T E+A+Q+++ I+
Sbjct: 166 DDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIA 225
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFLPWKQS 149
G ++LRK+ AA+ I+ +++S+N +LP QS
Sbjct: 226 NSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPAGQS 265
>BC095460-1|AAH95460.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 118 bits (284), Expect = 2e-26
Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
++ +G DYDE+ LPSI E+LKSVVA+F+A +LITQR+ VS + +L ERAA F +IL
Sbjct: 106 IFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLIL 165
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQX-XXXXXXXXXX 269
DDVSLT L+FGKE+T E+A+Q+++ I+
Sbjct: 166 DDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIA 225
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFLPWKQS 149
G ++LRK+ AA+ I+ +++S+N +LP QS
Sbjct: 226 NSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPAGQS 265
>BC013401-1|AAH13401.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 118 bits (284), Expect = 2e-26
Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
++ +G DYDE+ LPSI E+LKSVVA+F+A +LITQR+ VS + +L ERAA F +IL
Sbjct: 106 IFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLIL 165
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQX-XXXXXXXXXX 269
DDVSLT L+FGKE+T E+A+Q+++ I+
Sbjct: 166 DDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIA 225
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFLPWKQS 149
G ++LRK+ AA+ I+ +++S+N +LP QS
Sbjct: 226 NSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPAGQS 265
>AY577780-1|AAS88903.1| 272|Homo sapiens prohibitin protein.
Length = 272
Score = 118 bits (284), Expect = 2e-26
Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
++ +G DYDE+ LPSI E+LKSVVA+F+A +LITQR+ VS + +L ERAA F +IL
Sbjct: 106 IFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLIL 165
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQX-XXXXXXXXXX 269
DDVSLT L+FGKE+T E+A+Q+++ I+
Sbjct: 166 DDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIA 225
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFLPWKQS 149
G ++LRK+ AA+ I+ +++S+N +LP QS
Sbjct: 226 NSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPAGQS 265
>CR541706-1|CAG46507.1| 272|Homo sapiens PHB protein.
Length = 272
Score = 116 bits (280), Expect = 5e-26
Identities = 61/160 (38%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
++ +G DYDE+ LPSI E+LKSVVA+F+A +LITQR+ VS + +L ER A F +IL
Sbjct: 106 IFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERVATFGLIL 165
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQX-XXXXXXXXXX 269
DDVSLT L+FGKE+T E+A+Q+++ I+
Sbjct: 166 DDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAAIISAEGDSKAAELIA 225
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFLPWKQS 149
G ++LRK+ AA+ I+ +++S+N +LP QS
Sbjct: 226 NSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPAGQS 265
>BC014228-1|AAH14228.1| 201|Homo sapiens LOC494150 protein protein.
Length = 201
Score = 88.6 bits (210), Expect = 2e-17
Identities = 48/111 (43%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
++ +G DYDE L I E+LKSVVA+F+A ++ITQR+ VS + +L E+AA F +IL
Sbjct: 46 IFTSIGEDYDEPVLTYITTEILKSVVARFDAGEVITQRELVSRQVSNDLTEQAATFGLIL 105
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQER---QQKIVQ 302
DDVSLT L+FGKE+T E+A+Q++ QQK V+
Sbjct: 106 DDVSLTYLTFGKEFTEAVEAKQVAQQEAERARFVKEKAEQQKKAEQQKKVE 156
>BC005085-1|AAH05085.1| 156|Homo sapiens ZNF607 protein protein.
Length = 156
Score = 54.8 bits (126), Expect = 2e-07
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVE 473
++ +G DYDE LP I E+LKS+VA+F+A +LITQR+ VS + L+E
Sbjct: 106 IFTSIGEDYDECVLPFITTEILKSLVARFDAGELITQRELVSSQVSNNLME 156
>AF279895-1|AAK07552.1| 69|Homo sapiens PNAS-141 protein.
Length = 69
Score = 50.8 bits (116), Expect = 4e-06
Identities = 22/29 (75%), Positives = 27/29 (93%)
Frame = -3
Query: 250 NPGYLKLRKIRAAQSISRMIAQSQNRVFL 164
NPGY+KLRKIRAAQ+IS+ IA SQNR++L
Sbjct: 15 NPGYIKLRKIRAAQNISKTIATSQNRIYL 43
>BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 31.5 bits (68), Expect = 2.6
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 387 LNKLHNRRLSVQLL*LKGQSKSVN--RKLCKQREKLKLLRCWVKPW 256
L KLH+ ++S+QLL +VN RK C +E + L + +K W
Sbjct: 30 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
>AY540752-1|AAT44402.1| 154|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.22 protein.
Length = 154
Score = 31.5 bits (68), Expect = 2.6
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 387 LNKLHNRRLSVQLL*LKGQSKSVN--RKLCKQREKLKLLRCWVKPW 256
L KLH+ ++S+QLL +VN RK C +E + L + +K W
Sbjct: 30 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
>AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 31.5 bits (68), Expect = 2.6
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 387 LNKLHNRRLSVQLL*LKGQSKSVN--RKLCKQREKLKLLRCWVKPW 256
L KLH+ ++S+QLL +VN RK C +E + L + +K W
Sbjct: 30 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
>AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 31.5 bits (68), Expect = 2.6
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 387 LNKLHNRRLSVQLL*LKGQSKSVN--RKLCKQREKLKLLRCWVKPW 256
L KLH+ ++S+QLL +VN RK C +E + L + +K W
Sbjct: 30 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 75
>AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongation
factor TFIIS.h protein.
Length = 320
Score = 31.5 bits (68), Expect = 2.6
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -1
Query: 387 LNKLHNRRLSVQLL*LKGQSKSVN--RKLCKQREKLKLLRCWVKPW 256
L KLH+ ++S+QLL +VN RK C +E + L + +K W
Sbjct: 2 LKKLHSCQMSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNW 47
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,995,633
Number of Sequences: 237096
Number of extensions: 1107224
Number of successful extensions: 1719
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1711
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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