Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F13
(633 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g28510.1 68417.m04078 prohibitin, putative similar to SP|P241... 126 9e-30
At1g03860.3 68414.m00370 prohibitin, putative similar to SP|P241... 124 7e-29
At1g03860.2 68414.m00368 prohibitin, putative similar to SP|P241... 124 7e-29
At1g03860.1 68414.m00369 prohibitin, putative similar to SP|P241... 124 7e-29
At5g44140.1 68418.m05402 prohibitin, putative similar to SP|P241... 122 2e-28
At2g20530.1 68415.m02398 prohibitin, putative similar to SP|P241... 118 3e-27
At5g40770.1 68418.m04948 prohibitin identical to prohibitin [Ara... 116 2e-26
At3g27280.2 68416.m03410 prohibitin, putative strong similarity ... 112 2e-25
At3g27280.1 68416.m03409 prohibitin, putative strong similarity ... 112 2e-25
At5g14300.1 68418.m01672 prohibitin, putative similar to prohibi... 92 2e-19
At2g27770.1 68415.m03365 expressed protein 29 1.9
At2g01830.3 68415.m00115 histidine kinase (AHK4) (WOL) identical... 28 4.5
At2g01830.2 68415.m00116 histidine kinase (AHK4) (WOL) identical... 28 4.5
At2g01830.1 68415.m00114 histidine kinase (AHK4) (WOL) identical... 28 4.5
At1g20960.1 68414.m02624 U5 small nuclear ribonucleoprotein heli... 27 7.8
>At4g28510.1 68417.m04078 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 288
Score = 126 bits (305), Expect = 9e-30
Identities = 69/161 (42%), Positives = 97/161 (60%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
+YR LG +Y E+ LPSI NE LK+VVA++NASQLITQR+ VS IR+ L ERAA+FN+ L
Sbjct: 115 IYRSLGENYSERVLPSIINETLKAVVAQYNASQLITQREAVSREIRKILTERAANFNVAL 174
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQXXXXXXXXXXXX 266
DDVS+T L+FGKE+T E+A+Q+++ +++
Sbjct: 175 DDVSITNLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDKRSAVIRAQGEAKSAQLIG 234
Query: 265 XXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFLPWKQSDD 143
N ++ LRKI AA+ I++ IA S N+V+L SDD
Sbjct: 235 QAIANNQAFITLRKIEAAREIAQTIANSANKVYL---SSDD 272
>At1g03860.3 68414.m00370 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 286
Score = 124 bits (298), Expect = 7e-29
Identities = 66/154 (42%), Positives = 95/154 (61%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
+YR LG +Y E+ LPSI +E LK+VVA++NASQLITQR+ VS IR+ L ERA++F+I L
Sbjct: 115 IYRTLGENYSERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERASNFDIAL 174
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQXXXXXXXXXXXX 266
DDVS+T L+FGKE+T E+A+Q+R+ +++
Sbjct: 175 DDVSITTLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDRRSAVIRAQGEAKSAQLIG 234
Query: 265 XXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFL 164
N ++ LRKI AA+ I++ IAQS N+V+L
Sbjct: 235 QAIANNQAFITLRKIEAAREIAQTIAQSANKVYL 268
>At1g03860.2 68414.m00368 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 221
Score = 124 bits (298), Expect = 7e-29
Identities = 66/154 (42%), Positives = 95/154 (61%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
+YR LG +Y E+ LPSI +E LK+VVA++NASQLITQR+ VS IR+ L ERA++F+I L
Sbjct: 50 IYRTLGENYSERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERASNFDIAL 109
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQXXXXXXXXXXXX 266
DDVS+T L+FGKE+T E+A+Q+R+ +++
Sbjct: 110 DDVSITTLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDRRSAVIRAQGEAKSAQLIG 169
Query: 265 XXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFL 164
N ++ LRKI AA+ I++ IAQS N+V+L
Sbjct: 170 QAIANNQAFITLRKIEAAREIAQTIAQSANKVYL 203
>At1g03860.1 68414.m00369 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 286
Score = 124 bits (298), Expect = 7e-29
Identities = 66/154 (42%), Positives = 95/154 (61%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
+YR LG +Y E+ LPSI +E LK+VVA++NASQLITQR+ VS IR+ L ERA++F+I L
Sbjct: 115 IYRTLGENYSERVLPSIIHETLKAVVAQYNASQLITQREAVSREIRKILTERASNFDIAL 174
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQXXXXXXXXXXXX 266
DDVS+T L+FGKE+T E+A+Q+R+ +++
Sbjct: 175 DDVSITTLTFGKEFTAAIEAKQVAAQEAERAKFIVEKAEQDRRSAVIRAQGEAKSAQLIG 234
Query: 265 XXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFL 164
N ++ LRKI AA+ I++ IAQS N+V+L
Sbjct: 235 QAIANNQAFITLRKIEAAREIAQTIAQSANKVYL 268
>At5g44140.1 68418.m05402 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family; non-consensus TT acceptor
splice site at exon 2
Length = 278
Score = 122 bits (294), Expect = 2e-28
Identities = 66/154 (42%), Positives = 92/154 (59%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
+YR LG +Y E+ LPSI NE LK+VVA++NAS LITQR+ VS IR+ + ERAA FNI L
Sbjct: 115 IYRTLGQNYGERVLPSIINETLKAVVAQYNASHLITQREAVSREIRKIVTERAAKFNIAL 174
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQXXXXXXXXXXXX 266
DDVS+T L FGKE+T E+A+Q+++ I++
Sbjct: 175 DDVSITNLKFGKEFTEAIEKKQVAAQEAERAKFIVEKAEQDKKSAIIRAQGEAKSAQLIG 234
Query: 265 XXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFL 164
N ++ LRKI AA+ I++ IA+S N+V+L
Sbjct: 235 QAIANNEAFITLRKIEAAREIAQTIAKSANKVYL 268
>At2g20530.1 68415.m02398 prohibitin, putative similar to SP|P24142
Prohibitin (B-cell receptor associated protein 32) (BAP
32) {Rattus norvegicus}; contains Pfam profile PF01145:
SPFH domain / Band 7 family
Length = 286
Score = 118 bits (284), Expect = 3e-27
Identities = 64/154 (41%), Positives = 94/154 (61%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
+YR LG +Y E+ LPSI +E LK+VVA++NASQLITQR+ VS IR+ L RAA+F+I L
Sbjct: 113 VYRSLGENYRERVLPSIIHETLKAVVAQYNASQLITQRESVSREIRKILTLRAANFHIAL 172
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQXXXXXXXXXXXX 266
DDVS+T L+FGKE+T E+A+Q+++ +++
Sbjct: 173 DDVSITGLTFGKEFTAAIEGKQVAAQEAERAKFIVEKAEQDKRSAVIRAEGEAKSAQLIG 232
Query: 265 XXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFL 164
N +L LRKI AA+ I++ I++S N+V+L
Sbjct: 233 QAIANNQAFLTLRKIEAAREIAQTISRSANKVYL 266
>At5g40770.1 68418.m04948 prohibitin identical to prohibitin
[Arabidopsis thaliana] GI:1946331
Length = 277
Score = 116 bits (278), Expect = 2e-26
Identities = 62/160 (38%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
+++ LG +YDEK LPSI NEVLK+VVA+FNA QL+T+R VS L+R L+ RA DFNI+L
Sbjct: 111 IFQTLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLITRAKDFNIVL 170
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQ-XXXXXXXXXXX 269
DDV++T LS+G E++ +A QER+ +++
Sbjct: 171 DDVAITHLSYGVEFSRAVEQKQVAQQEAERSKFVVMKADQERRAAVIRAEGESEAAQLIS 230
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFLPWKQS 149
G ++LR+I A++ I+ +A+S N +LP QS
Sbjct: 231 DATAKAGMGLIELRRIEASREIASTLARSPNVAYLPGGQS 270
>At3g27280.2 68416.m03410 prohibitin, putative strong similarity to
prohibitin [Arabidopsis thaliana] GI:1946331; contains
Pfam profile PF01145: SPFH domain / Band 7 family
Length = 279
Score = 112 bits (270), Expect = 2e-25
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
+++ LG +YDEK LPSI NEVLK+VVA FNA QL+T+R QVS L+R L++RA +FNI L
Sbjct: 111 IFQTLGLEYDEKVLPSIGNEVLKAVVANFNADQLLTERPQVSALVRDALIKRAREFNIEL 170
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQ-XXXXXXXXXXX 269
DD+++T LS+G E++ +A QER+ +++
Sbjct: 171 DDIAITHLSYGAEFSRAVEAKQVAQQEAERSKFVVMKADQERRAAVIRAEGESEAAQLIS 230
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFLPWKQS 149
G ++LR+I A++ ++ +A+S N +LP QS
Sbjct: 231 DATAKAGMGLIELRRIEASREVAATLARSPNVAYLPGGQS 270
>At3g27280.1 68416.m03409 prohibitin, putative strong similarity to
prohibitin [Arabidopsis thaliana] GI:1946331; contains
Pfam profile PF01145: SPFH domain / Band 7 family
Length = 279
Score = 112 bits (270), Expect = 2e-25
Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 1/160 (0%)
Frame = -3
Query: 625 MYRQLGTDYDEKXLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIIL 446
+++ LG +YDEK LPSI NEVLK+VVA FNA QL+T+R QVS L+R L++RA +FNI L
Sbjct: 111 IFQTLGLEYDEKVLPSIGNEVLKAVVANFNADQLLTERPQVSALVRDALIKRAREFNIEL 170
Query: 445 DDVSLTELSFGKEYTXXXXXXXXXXXXXXXXXXXXERAKQERQQKIVQ-XXXXXXXXXXX 269
DD+++T LS+G E++ +A QER+ +++
Sbjct: 171 DDIAITHLSYGAEFSRAVEAKQVAQQEAERSKFVVMKADQERRAAVIRAEGESEAAQLIS 230
Query: 268 XXXXXMNPGYLKLRKIRAAQSISRMIAQSQNRVFLPWKQS 149
G ++LR+I A++ ++ +A+S N +LP QS
Sbjct: 231 DATAKAGMGLIELRRIEASREVAATLARSPNVAYLPGGQS 270
>At5g14300.1 68418.m01672 prohibitin, putative similar to prohibitin
[Arabidopsis thaliana] GI:1946331; contains Pfam profile
PF01145: SPFH domain / Band 7 family
Length = 249
Score = 92.3 bits (219), Expect = 2e-19
Identities = 49/137 (35%), Positives = 78/137 (56%), Gaps = 1/137 (0%)
Frame = -3
Query: 568 EVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNIILDDVSLTELSFGKEYTXXXX 389
+V+K+VVA+FNA +L+T+R QVS LIR L++RA +FNI+LDDVS+T LS+GKE++
Sbjct: 96 DVVKAVVAQFNADELLTERPQVSALIRETLIKRAKEFNIVLDDVSITGLSYGKEFSLAVE 155
Query: 388 XXXXXXXXXXXXXXXXERAKQERQQKIVQ-XXXXXXXXXXXXXXXXMNPGYLKLRKIRAA 212
+A QER+ +++ G +KLR++ AA
Sbjct: 156 RKQVAQQEAERSKFVVAKADQERRAAVIRAEGESEAARVISKATAGAGMGLIKLRRVEAA 215
Query: 211 QSISRMIAQSQNRVFLP 161
+ ++ ++ S N V+LP
Sbjct: 216 REVAITLSNSPNVVYLP 232
>At2g27770.1 68415.m03365 expressed protein
Length = 320
Score = 29.5 bits (63), Expect = 1.9
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -2
Query: 224 NSCCSKYFENDCSISEPCLPXLETV**SIFKILL 123
+S CSKY N+ IS +P ++T SI++I L
Sbjct: 25 SSSCSKYSTNNVCISPSLIPSIQTSITSIYRITL 58
>At2g01830.3 68415.m00115 histidine kinase (AHK4) (WOL) identical to
histidine kinase AHK4 [Arabidopsis thaliana]
gi|13537200|dbj|BAB40776; contains Pfam profiles
PF03924: CHASE domain, PF02518: ATPase, histidine
kinase-, DNA gyrase B-, and HSP90-like domain protein,
PF00512: His Kinase A (phosphoacceptor) domain,
PF00072: Response regulator receiver domain
Length = 1057
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 184 SQNRVFLPWKQSDDQSSRSY 125
+Q RVF+P+ Q+D +SR+Y
Sbjct: 677 AQGRVFMPFMQADSSTSRNY 696
>At2g01830.2 68415.m00116 histidine kinase (AHK4) (WOL) identical to
histidine kinase AHK4 [Arabidopsis thaliana]
gi|13537200|dbj|BAB40776; contains Pfam profiles
PF03924: CHASE domain, PF02518: ATPase, histidine
kinase-, DNA gyrase B-, and HSP90-like domain protein,
PF00512: His Kinase A (phosphoacceptor) domain,
PF00072: Response regulator receiver domain
Length = 1080
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 184 SQNRVFLPWKQSDDQSSRSY 125
+Q RVF+P+ Q+D +SR+Y
Sbjct: 700 AQGRVFMPFMQADSSTSRNY 719
>At2g01830.1 68415.m00114 histidine kinase (AHK4) (WOL) identical to
histidine kinase AHK4 [Arabidopsis thaliana]
gi|13537200|dbj|BAB40776; contains Pfam profiles
PF03924: CHASE domain, PF02518: ATPase, histidine
kinase-, DNA gyrase B-, and HSP90-like domain protein,
PF00512: His Kinase A (phosphoacceptor) domain,
PF00072: Response regulator receiver domain
Length = 1057
Score = 28.3 bits (60), Expect = 4.5
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 184 SQNRVFLPWKQSDDQSSRSY 125
+Q RVF+P+ Q+D +SR+Y
Sbjct: 677 AQGRVFMPFMQADSSTSRNY 696
>At1g20960.1 68414.m02624 U5 small nuclear ribonucleoprotein helicase,
putative similar to SP|O75643 U5 small nuclear
ribonucleoprotein 200 kDa helicase {Homo sapiens};
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain, PF02889:
Sec63 domain
Length = 2171
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 143 IIRLFPGXEDTVLRLSNHSR 202
+I + PG EDTV RL NH R
Sbjct: 1884 MIPIRPGEEDTVRRLINHQR 1903
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,645,917
Number of Sequences: 28952
Number of extensions: 166030
Number of successful extensions: 346
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1295224128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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