Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_F09
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   0.83 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   0.83 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    25   0.83 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    24   1.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   3.3  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   4.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.8  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -1

Query: 414 KRMDALHADELAWWLCER-QLPSGGLNGRPEKLPDL 310
           K  D    DE++   C+  ++PS GL G  +++PD+
Sbjct: 86  KLSDKFLDDEMSKKSCQGCEMPSAGLCGSHDEIPDI 121


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -1

Query: 414 KRMDALHADELAWWLCER-QLPSGGLNGRPEKLPDL 310
           K  D    DE++   C+  ++PS GL G  +++PD+
Sbjct: 34  KLSDKFLDDEMSKKSCQGCEMPSAGLCGSHDEIPDI 69


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -1

Query: 414 KRMDALHADELAWWLCER-QLPSGGLNGRPEKLPDL 310
           K  D    DE++   C+  ++PS GL G  +++PD+
Sbjct: 217 KLSDKFLDDEMSKKSCQGCEMPSAGLCGSHDEIPDI 252


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/36 (22%), Positives = 17/36 (47%)
 Frame = -1

Query: 315 DLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDY 208
           D  +++W  S+   +  I W+  ++ EE +     Y
Sbjct: 324 DYFFTFWAFSNACEVMAIVWITSETCEEIVAGVTTY 359


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = -1

Query: 315 DLCYSWWVMSSLSMLNRIHWVDKKSLEEFILAC 217
           D  +++W  S+   +  I W+  ++ EE    C
Sbjct: 324 DYFFTFWAFSNACEVMAIVWITSETCEEVSKKC 356


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +2

Query: 461 LSDPGLEPNPPSKFMQLSTN 520
           L +PGL  NPP    QL  N
Sbjct: 191 LQNPGLNLNPPVTQTQLPLN 210



 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 170 VMSPGLSLKPPVS 208
           + +PGL+L PPV+
Sbjct: 191 LQNPGLNLNPPVT 203


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 202 SFIILTC*DKFF*AFLVYPVN 264
           +FIIL C   F+ AF+++ V+
Sbjct: 106 AFIILLCVYYFYYAFIIFTVH 126


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 280 K*RHDPPRVAQIWQFFRSTIQT 345
           K RH+  ++AQ+++    TI+T
Sbjct: 607 KMRHELQKLAQVYRILGETIET 628


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,171
Number of Sequences: 336
Number of extensions: 4530
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)