Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F09
(729 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC167.02 |ptb1||geranylgeranyltransferase II beta subunit |Sch... 264 1e-71
SPAC2E1P5.04c |cwg2|orb7|geranylgeranyltransferase I beta subuni... 110 2e-25
SPAC17G6.04c |cpp1||protein farnesyltransferase beta subunit Cpp... 104 1e-23
SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7 |Schizos... 32 0.073
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 30 0.29
SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces po... 27 2.1
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 27 2.1
SPCC320.12 ||SPCC330.17c|mitochondrial inner membrane peptidase ... 27 3.6
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 25 8.4
>SPAC167.02 |ptb1||geranylgeranyltransferase II beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 311
Score = 264 bits (646), Expect = 1e-71
Identities = 110/225 (48%), Positives = 156/225 (69%)
Frame = -1
Query: 726 AVQVXAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRLD 547
AVQV AM D L VD + + YI+ LQ EDGS GD+WGEID RF + + CL++L +LD
Sbjct: 87 AVQVLAMLDSLHVVDKDKVASYIIGLQNEDGSMKGDRWGEIDARFLYSGINCLAILGKLD 146
Query: 546 AIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLC 367
++ N V++++ C NFDGGFG PG+ESH +++ CV L I ++D + + L WW+
Sbjct: 147 YLNKNTAVDWLMKCYNFDGGFGLCPGAESHGAMVFTCVAALKILNKLDLIDEELLGWWIS 206
Query: 366 ERQLPSGGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFSD 187
ERQ+ GGLNGRPEKLPD CY WW +S L+++ ++ W+D+ L +F+L QD ++GGF+D
Sbjct: 207 ERQVKGGGLNGRPEKLPDSCYGWWDLSPLAIIGKLDWIDRNQLIDFLLGTQDADSGGFAD 266
Query: 186 RPGDITDPFHTLFGLAGLSLLGNTSIKPVNPTYCMPQETIDRLKL 52
R D TD +HT F LAGLSLL +I+PV+P +C+P E ++KL
Sbjct: 267 RKEDATDVYHTCFSLAGLSLLQFPNIEPVDPRFCLPLEVTQKMKL 311
Score = 62.1 bits (144), Expect = 8e-11
Identities = 35/134 (26%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Frame = -1
Query: 573 CLS--LLQRLDAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDA 400
C+S LL++ D ID + V F+LSC+ GGF PG + H V L++ +
Sbjct: 40 CMSFWLLKKKDQIDKERIVSFLLSCLTESGGFACYPGHDDHITNTVYAVQVLAMLDSLHV 99
Query: 399 LHADELAWWLCERQLPSGGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILA 220
+ D++A ++ Q G + G D + + ++ L++L ++ +++K + ++++
Sbjct: 100 VDKDKVASYIIGLQNEDGSMKGDRWGEIDARFLYSGINCLAILGKLDYLNKNTAVDWLMK 159
Query: 219 CQDYETGGFSDRPG 178
C +++ GGF PG
Sbjct: 160 CYNFD-GGFGLCPG 172
Score = 40.7 bits (91), Expect = 2e-04
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 1/154 (0%)
Frame = -1
Query: 729 SAVQVXAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL 550
S + A+ +LD ++ V +++ DG F E F V L +L +L
Sbjct: 134 SGINCLAILGKLDYLNKNTAVDWLMKCYNFDGGFGLCPGAESHGAMVFTCVAALKILNKL 193
Query: 549 DAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWL 370
D ID ++ GG +P + + + L+I ++D + ++L +L
Sbjct: 194 DLIDEELLGWWISERQVKGGGLNGRPEKLPDSCYGWWDLSPLAIIGKLDWIDRNQLIDFL 253
Query: 369 CERQ-LPSGGLNGRPEKLPDLCYSWWVMSSLSML 271
Q SGG R E D+ ++ + ++ LS+L
Sbjct: 254 LGTQDADSGGFADRKEDATDVYHTCFSLAGLSLL 287
Score = 40.3 bits (90), Expect = 3e-04
Identities = 28/113 (24%), Positives = 51/113 (45%)
Frame = -1
Query: 459 HAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGGLNGRPEKLPDLCYSWWVMSSL 280
H IY + + K+ D + + + +L SGG P + + + + L
Sbjct: 32 HVSAIYWSCMSFWLLKKKDQIDKERIVSFLLSCLTESGGFACYPGHDDHITNTVYAVQVL 91
Query: 279 SMLNRIHWVDKKSLEEFILACQDYETGGFSDRPGDITDPFHTLFGLAGLSLLG 121
+ML+ +H VDK + +I+ Q+ + DR G+I D G+ L++LG
Sbjct: 92 AMLDSLHVVDKDKVASYIIGLQNEDGSMKGDRWGEI-DARFLYSGINCLAILG 143
Score = 34.3 bits (75), Expect = 0.018
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = -1
Query: 300 WWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFSDRPGDITDPFHTLFGLAGLSLLG 121
+W S +L + +DK+ + F+L+C E+GGF+ PG +T++ + L++L
Sbjct: 37 YWSCMSFWLLKKKDQIDKERIVSFLLSCLT-ESGGFACYPGHDDHITNTVYAVQVLAMLD 95
Query: 120 NTSI 109
+ +
Sbjct: 96 SLHV 99
>SPAC2E1P5.04c |cwg2|orb7|geranylgeranyltransferase I beta subunit
Cwg2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 110 bits (264), Expect = 2e-25
Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 20/233 (8%)
Frame = -1
Query: 702 DRLDAVDIEGIVRYIVSLQQEDGSFYG---DKWGEIDXRFSFCAVMCLSLLQRLDAIDIN 532
D L +D + I ++ + G F + D R + A SLL D
Sbjct: 112 DNLSRIDRDLIKNFVELCKTSQGHFRSIAVPSCSDQDMRQLYMATTIASLLD-FSLSDPL 170
Query: 531 KTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRM----------------DA 400
+++++ SC ++GGF P E+HAG +C + + S+ +M D
Sbjct: 171 CSIQYIKSCQRYEGGFSLLPYGEAHAGATFCALASWSLILKMIPNSSLNTSNQSYNLMDC 230
Query: 399 L-HADELAWWLCERQLPSGGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFIL 223
+ + L WL RQL SGGLNGR K D CY++WV+SSL +L+ + ++D LE+++L
Sbjct: 231 VPKVERLIRWLASRQLSSGGLNGRTNKDVDTCYAYWVLSSLKLLDALPFIDGGELEKYLL 290
Query: 222 ACQDYETGGFSDRPGDITDPFHTLFGLAGLSLLGNTSIKPVNPTYCMPQETID 64
+ GGFS PG+ D H+ GL ++ + S VN M + I+
Sbjct: 291 LHAQHALGGFSKTPGEFPDVLHSALGLYAMAYQDDKSFPKVNADIHMTSKYIN 343
>SPAC17G6.04c |cpp1||protein farnesyltransferase beta subunit
Cpp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 382
Score = 104 bits (249), Expect = 1e-23
Identities = 63/205 (30%), Positives = 106/205 (51%), Gaps = 14/205 (6%)
Frame = -1
Query: 702 DRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRLDAID--INK 529
D ++ + + ++ SL+ DGSF + GE D R + AV C+S L + D
Sbjct: 122 DAYSLIERDRLYDWLFSLKNPDGSFRVNNEGESDARSVYAAV-CVSSLVGISMDDPLFEG 180
Query: 528 TVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPS 349
T++++ C ++GG P +E+H G +C + +++ +D L+ +L+ WL +RQ P+
Sbjct: 181 TLQWLCKCQTYEGGLSGVPYAEAHGGYTFCALAAIALLGGLDNLNEIKLSTWLVQRQDPA 240
Query: 348 -GGLNGRPEKLPDLCYSWWVMSSLSML-----NRIH------WVDKKSLEEFILACQDYE 205
G +GR KL D CYSWWV +S ++ + H + + + L +IL C
Sbjct: 241 LYGFSGRSNKLVDGCYSWWVGASHVIVASGYGSASHKSLPNLFYNPEKLLGYILQCCQST 300
Query: 204 TGGFSDRPGDITDPFHTLFGLAGLS 130
+GG D+P D +HT + L GLS
Sbjct: 301 SGGLRDKPPKRPDQYHTCYCLLGLS 325
Score = 46.0 bits (104), Expect = 6e-06
Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Frame = -1
Query: 570 LSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDA--- 400
L++L +LD+ + + V GGF G + H Y + ++ +C DA
Sbjct: 67 LAILGKLDSSVCERAISSVRQLKGPSGGFCGGNGQDEHLLSTYASILSICLCDSTDAYSL 126
Query: 399 LHADELAWWLCERQLPSGG--LNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFI 226
+ D L WL + P G +N E Y+ +SSL ++ + + +L +++
Sbjct: 127 IERDRLYDWLFSLKNPDGSFRVNNEGESDARSVYAAVCVSSLVGISMDDPLFEGTL-QWL 185
Query: 225 LACQDYETGGFSDRPGDITDPFHTLFGLAGLSLLG 121
CQ YE GG S P +T LA ++LLG
Sbjct: 186 CKCQTYE-GGLSGVPYAEAHGGYTFCALAAIALLG 219
>SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 721
Score = 32.3 bits (70), Expect = 0.073
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Frame = -1
Query: 726 AVQVXAMYD---RLDAVD--IEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSL 562
A++ YD R D ++ IE + Y+V +Q+ DGS+YG W F++ A+
Sbjct: 535 ALRAFTKYDPGYRRDEIENTIENALEYVVKMQRPDGSWYG-SWA---ICFTYAAMFATGS 590
Query: 561 LQRLDAIDIN-----KTVEFVLSCMNFDGGF 484
L N K EF+LS DGG+
Sbjct: 591 LASAGRYYENCPVQKKACEFLLSKQRPDGGW 621
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 30.3 bits (65), Expect = 0.29
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 486 FGSKPGSESHAGLIYCCVGTLSICKRMDALH 394
F S+P S SHA YC S+C + LH
Sbjct: 458 FRSRPDSTSHASCTYCVARLRSVCNFVAFLH 488
>SPBC1604.18c |||vacuolar sorting protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 449
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -1
Query: 135 LSLLGNTSIKPVNPTYCMPQETIDRLKLKPQRLQ 34
+S LGN S+K + T+ + D+ KP+++Q
Sbjct: 410 VSTLGNVSLKTPSDTFTLTNTDSDKKTSKPEKIQ 443
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 27.5 bits (58), Expect = 2.1
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -1
Query: 522 EFVLSCMNFDGGFGSKPGSESHAGLIY 442
+F ++C++ +G + P +ES G+IY
Sbjct: 471 KFEMACLDHEGALYASPATESSPGVIY 497
>SPCC320.12 ||SPCC330.17c|mitochondrial inner membrane peptidase
Atp23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 185
Score = 26.6 bits (56), Expect = 3.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +3
Query: 450 DQHGFPIQVWNRIHHQSSCN*AQTPQSC*CRW 545
D H F + WN + HQ+ + S CRW
Sbjct: 93 DDHRFEVD-WNNLRHQACSEIRASSMSGECRW 123
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 25.4 bits (53), Expect = 8.4
Identities = 11/20 (55%), Positives = 17/20 (85%), Gaps = 1/20 (5%)
Frame = -1
Query: 249 KKSLEEFILACQDYETG-GF 193
+K+++ +ILA QD+ETG GF
Sbjct: 1909 RKAMDCYILASQDFETGEGF 1928
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,243,517
Number of Sequences: 5004
Number of extensions: 70882
Number of successful extensions: 201
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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