Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F09
(729 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1226 + 25394106-25394168,25394243-25394396,25394548-253946... 258 2e-69
01_01_0336 + 2712412-2712576,2713663-2713738,2713840-2713898,271... 69 5e-12
01_06_0638 - 30768546-30768779,30768908-30769017,30769301-307694... 61 8e-10
03_05_1094 - 30348366-30348467,30348571-30348753,30348833-303489... 35 0.076
11_07_0018 - 27458523-27458541,27458722-27458864 29 3.8
11_01_0569 + 4515722-4515733,4517579-4517701,4517812-4517934,452... 29 3.8
09_02_0263 + 6416010-6416152,6416333-6416351 29 3.8
10_08_0851 - 21065832-21065948,21066361-21066705,21067181-210674... 29 5.0
07_03_0923 - 22617627-22617860,22618486-22618542,22618612-226187... 28 8.7
06_02_0186 + 12787866-12788055,12788575-12788642,12788864-127890... 28 8.7
04_03_0073 - 10702352-10702619,10702702-10702836,10702915-10703594 28 8.7
02_05_1033 + 33642479-33642688,33643089-33643343,33643479-336436... 28 8.7
>08_02_1226 +
25394106-25394168,25394243-25394396,25394548-25394664,
25395541-25395607,25395701-25395828,25396327-25396460,
25396552-25396650,25396780-25396902
Length = 294
Score = 258 bits (633), Expect = 2e-69
Identities = 112/206 (54%), Positives = 147/206 (71%)
Frame = -1
Query: 729 SAVQVXAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL 550
SAVQV ++DRLDA+D++ + YI LQ EDGSF GD WGE+D RFS+ A+ LSLL RL
Sbjct: 90 SAVQVLCLFDRLDALDVDKVADYIAGLQNEDGSFSGDIWGEVDTRFSYIAICTLSLLHRL 149
Query: 549 DAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWL 370
+ I++ K V++++SC N DGGFG+ PG ++CCVG L+I + + D L WWL
Sbjct: 150 EKINVQKAVDYIVSCKNLDGGFGAMPG-------VFCCVGALAITGSLHHIDRDLLGWWL 202
Query: 369 CERQLPSGGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFS 190
CERQ GGLNGRPEKL D+CYSWWV+SSL M++R+HW+DK L +FIL CQD E GG S
Sbjct: 203 CERQCKEGGLNGRPEKLADVCYSWWVLSSLIMIDRVHWIDKDKLAKFILNCQDKENGGIS 262
Query: 189 DRPGDITDPFHTLFGLAGLSLLGNTS 112
DRP + D +HT FG+AG+ + +S
Sbjct: 263 DRPDNAVDIYHTYFGVAGVYISNRSS 288
Score = 68.5 bits (160), Expect = 5e-12
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 1/193 (0%)
Frame = -1
Query: 699 RLDAVDIEGIVRYIVSLQQ-EDGSFYGDKWGEIDXRFSFCAVMCLSLLQRLDAIDINKTV 523
+L AV+ + ++ +I+S E G F G+ + ++ AV L L RLDA+D++K
Sbjct: 51 KLRAVEADEVIEWIMSCYHPESGGFGGNVGHDAHVLYTLSAVQVLCLFDRLDALDVDKVA 110
Query: 522 EFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGG 343
+++ N DG F E Y + TLS+ R++ ++ + ++ + GG
Sbjct: 111 DYIAGLQNEDGSFSGDIWGEVDTRFSYIAICTLSLLHRLEKINVQKAVDYIVSCKNLDGG 170
Query: 342 LNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFSDRPGDITDP 163
P C + +L++ +H +D+ L ++ Q E GG + RP + D
Sbjct: 171 FGAMPGV---FC----CVGALAITGSLHHIDRDLLGWWLCERQCKE-GGLNGRPEKLADV 222
Query: 162 FHTLFGLAGLSLL 124
++ + L+ L ++
Sbjct: 223 CYSWWVLSSLIMI 235
Score = 37.9 bits (84), Expect = 0.008
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = -1
Query: 444 YCCVGTLSICKRMDALHADELAWWLCERQLP-SGGLNGRPEKLPDLCYSWWVMSSLSMLN 268
Y + TL + ++ A+ ADE+ W+ P SGG G + Y+ + L + +
Sbjct: 40 YWGLTTLDLLHKLRAVEADEVIEWIMSCYHPESGGFGGNVGHDAHVLYTLSAVQVLCLFD 99
Query: 267 RIHWVDKKSLEEFILACQDYETGGFSDRPGDITDPFHTLFGLAGLSLL 124
R+ +D + ++I Q+ E G FS GDI T F + L
Sbjct: 100 RLDALDVDKVADYIAGLQN-EDGSFS---GDIWGEVDTRFSYIAICTL 143
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/60 (26%), Positives = 37/60 (61%)
Frame = -1
Query: 303 SWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFSDRPGDITDPFHTLFGLAGLSLL 124
++W +++L +L+++ V+ + E+I++C E+GGF G++ H L+ L+ + +L
Sbjct: 39 AYWGLTTLDLLHKLRAVEADEVIEWIMSCYHPESGGFG---GNVGHDAHVLYTLSAVQVL 95
>01_01_0336 +
2712412-2712576,2713663-2713738,2713840-2713898,
2714009-2714148,2714690-2714745,2714832-2714908,
2715007-2715075
Length = 213
Score = 68.5 bits (160), Expect = 5e-12
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Frame = -1
Query: 705 YDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWG-EIDXRFSFCAVMCLSLLQRLDAIDINK 529
YD L +D + ++ + +LQQ DGSF G E D RF +CA S+L+ +D K
Sbjct: 124 YD-LANIDNKVLLSSMRNLQQPDGSFMPTHIGAETDLRFVYCAAAICSMLKDWTGMDKEK 182
Query: 528 TVEFVLSCMNFDGGFGSKPGSESH 457
+++LSC ++DGGFG PGSESH
Sbjct: 183 AKQYILSCQSYDGGFGLVPGSESH 206
Score = 33.1 bits (72), Expect = 0.23
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = -1
Query: 315 DLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFSDRPG 178
DL + + + SML +DK+ +++IL+CQ Y+ GGF PG
Sbjct: 158 DLRFVYCAAAICSMLKDWTGMDKEKAKQYILSCQSYD-GGFGLVPG 202
>01_06_0638 -
30768546-30768779,30768908-30769017,30769301-30769490,
30769842-30769914,30770007-30770063,30770147-30770211,
30770278-30770488,30770568-30770650,30771123-30771158,
30771611-30771713,30771813-30771899,30772210-30772403
Length = 480
Score = 61.3 bits (142), Expect = 8e-10
Identities = 44/202 (21%), Positives = 90/202 (44%), Gaps = 1/202 (0%)
Frame = -1
Query: 729 SAVQVXAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL 550
+A+ V ++ + LD +G+ YI Q +G G+ + E ++FC + + LL +
Sbjct: 235 TAISVASLVNILDGELAKGVGNYITRCQTYEGGIAGEPYAEAHGGYTFCGLATMILLNEV 294
Query: 549 DAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWL 370
D +D+ + + F S S+ L+Y L++ +++ + ++L
Sbjct: 295 DKLDLASLIVNAIPVFFF---LASSTLSDKL--LVYDQGAALALTQKLMTVVDEQLKSSY 349
Query: 369 CERQLPSGGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKK-SLEEFILACQDYETGGF 193
++ P G Y+ + + N+I + +L+++IL C GG
Sbjct: 350 SSKRPPGDDACGTSSSTEAAYYAKFGFDFIEKSNQIGPLFHNIALQQYILLCAQVLDGGL 409
Query: 192 SDRPGDITDPFHTLFGLAGLSL 127
D+PG D +H+ + L+GLS+
Sbjct: 410 RDKPGKNRDHYHSCYCLSGLSV 431
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = -1
Query: 612 GEIDXRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCV 433
GEID R S+ A+ SL+ LD ++ C ++GG +P +E+H G +C +
Sbjct: 226 GEIDVRASYTAISVASLVNILDGELAKGVGNYITRCQTYEGGIAGEPYAEAHGGYTFCGL 285
Query: 432 GTLSICKRMDAL 397
T+ + +D L
Sbjct: 286 ATMILLNEVDKL 297
Score = 35.9 bits (79), Expect = 0.033
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = -1
Query: 579 VMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTL 424
+ L+LL + + V+F+ C + DGG+G PG H Y V TL
Sbjct: 103 IHALALLDEIPDDVEDDIVDFLSRCQDKDGGYGGGPGQLPHLATTYAAVNTL 154
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = -1
Query: 318 PDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFSDRPGDI 172
P LCY W++ +L++L+ I + + +F+ CQD + GG+ PG +
Sbjct: 96 PWLCY--WIIHALALLDEIPDDVEDDIVDFLSRCQD-KDGGYGGGPGQL 141
>03_05_1094 - 30348366-30348467,30348571-30348753,30348833-30348934,
30349617-30349967,30350049-30350276,30350353-30350509,
30351189-30351370,30351443-30351866,30351949-30352892,
30353509-30353773,30354558-30355120
Length = 1166
Score = 34.7 bits (76), Expect = 0.076
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 336 HSDHHWAAVVHIATTPARLRVGRPCACISTVYPHSSKLDQHGFPIQVWN 482
HS H + H+ T P + VG PC V +Q+G + +W+
Sbjct: 996 HSLSHTCCIAHLGTYPPNVCVGTPCWMAPEVLRAMRDKNQYGLEVDIWS 1044
>11_07_0018 - 27458523-27458541,27458722-27458864
Length = 53
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 690 AVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFS 589
A+ + +V Y+ + Q+ G DKW E+D R S
Sbjct: 3 AMSADNLVIYVATTQRGGGQQEWDKWNELDMRTS 36
>11_01_0569 +
4515722-4515733,4517579-4517701,4517812-4517934,
4520422-4520520,4520649-4520705,4521421-4521533,
4521633-4521810,4523684-4523764,4523837-4523920,
4525429-4525437
Length = 292
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = -1
Query: 663 YIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL--DAIDINKTVEFVLSCMNFDG 490
+I S Q+ DGS+YG WG ++ AV L R ++ + K +F+LS G
Sbjct: 165 FIESSQRSDGSWYG-SWGICFTYATWFAVTGLVSAGRTLGNSATVRKACDFLLSKQLPSG 223
Query: 489 GFG 481
G+G
Sbjct: 224 GWG 226
>09_02_0263 + 6416010-6416152,6416333-6416351
Length = 53
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -1
Query: 690 AVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFS 589
A+ + +V Y+ + Q+ G DKW E+D R S
Sbjct: 3 AMSADNLVIYVATTQRGGGQQEWDKWNELDMRTS 36
>10_08_0851 -
21065832-21065948,21066361-21066705,21067181-21067489,
21067574-21067648,21067754-21067917,21067994-21068432
Length = 482
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 429 TLSICKRMDALHADELAWWLCERQLPSGGLNGRPEK 322
T+S + H +E WWL +P GG++G+ K
Sbjct: 255 TMSSSSFRRSTHRNEDRWWLPVPCVPDGGISGKARK 290
>07_03_0923 -
22617627-22617860,22618486-22618542,22618612-22618768,
22618875-22619014,22619642-22619777,22619874-22620142,
22620272-22620492,22620648-22620707,22620859-22620915,
22621008-22621405,22621929-22622000,22622098-22622169,
22622246-22622317,22622574-22622645,22622738-22622867,
22623065-22623170
Length = 750
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 180 GDITDPFHTLFGLAGLSLLGNTSIKPVNPT 91
G+I D F TL GLA L N P+ P+
Sbjct: 136 GEIPDAFSTLTGLANLDFSSNNLTGPLPPS 165
>06_02_0186 +
12787866-12788055,12788575-12788642,12788864-12789007,
12789112-12789268,12789344-12789366,12789487-12789495,
12789694-12790108,12790449-12790652,12790741-12791201,
12791206-12791476,12791560-12791951
Length = 777
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -3
Query: 406 GRPTRRRAGVVAM*TTAAQWWSEWS--TGKTARFVLLLVGHVFTFN 275
GR R+ + T+ AQWWS ++ T K + L LVG +F+
Sbjct: 388 GRALARKMAIDGK-TSPAQWWSMFASDTPKLKKLALCLVGQCCSFS 432
>04_03_0073 - 10702352-10702619,10702702-10702836,10702915-10703594
Length = 360
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -2
Query: 575 CVYHSYNDWMPSTSTRLWSLC 513
C Y+ Y W+P T WS C
Sbjct: 267 CAYNQYAHWIPLVITPKWSRC 287
>02_05_1033 +
33642479-33642688,33643089-33643343,33643479-33643603,
33643827-33643908,33644008-33644076,33644102-33644341,
33644431-33644496,33645087-33645155,33645229-33645366,
33645681-33645754,33646146-33646255,33646428-33646525,
33646595-33646633,33646771-33646890,33646984-33647109,
33647321-33647382,33647467-33647518,33648182-33648436
Length = 729
Score = 27.9 bits (59), Expect = 8.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 475 TWIGKPCWSNLLLCGYTVDMQAHG 404
T++G PCW+++ G T AHG
Sbjct: 190 TFVGTPCWADIWSFGITALELAHG 213
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,773,306
Number of Sequences: 37544
Number of extensions: 497921
Number of successful extensions: 1273
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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