Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_F09
         (729 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    25   1.8  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    25   3.2  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   4.2  
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    23   7.3  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   7.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   7.3  

>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +3

Query: 336 HSDHHWAAVVHIATTPARLRVGRPCACISTVYPHSSKLD 452
           H    W  V+ +   P  LR+ RP   +S  YP +   D
Sbjct: 341 HEMSDWVRVIFLYWLPCILRMSRPGRDLSMEYPPTPTSD 379


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 303 SSTNLAVFPVDHS 341
           SST +A FP+DHS
Sbjct: 129 SSTQIAAFPLDHS 141


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 352 QWWSEWSTGKTARFVLLLVGHV 287
           QW +EWS     R+  LL+  V
Sbjct: 910 QWQNEWSNSLNGRWTYLLIPDV 931


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 294 PTKSSTNLAVFPVDHSDHHW 353
           P K STN  ++P DH D+ W
Sbjct: 62  PGKCSTNEILYPGDH-DNDW 80


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 123 GNTSIKPVNPTYCMPQETIDRLKLKPQRLQI 31
           GN+ I P+ P Y M ++ I  +   P  +++
Sbjct: 727 GNSKIYPIFPRYTMLKDMIKDIMHDPDYMEV 757


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -1

Query: 123 GNTSIKPVNPTYCMPQETIDRLKLKPQRLQI 31
           GN+ I P+ P Y M ++ I  +   P  +++
Sbjct: 727 GNSKIYPIFPRYTMLKDMIKDIMHDPDYMEV 757


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 858,749
Number of Sequences: 2352
Number of extensions: 20449
Number of successful extensions: 39
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)