Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F09
(729 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g12210.2 68418.m01433 geranylgeranyl transferase type II beta... 299 1e-81
At5g12210.1 68418.m01432 geranylgeranyl transferase type II beta... 299 1e-81
At3g12070.2 68416.m01503 geranylgeranyl transferase type II beta... 292 2e-79
At3g12070.1 68416.m01502 geranylgeranyl transferase type II beta... 292 2e-79
At2g39550.1 68415.m04852 geranylgeranyl transferase type I beta ... 140 1e-33
At5g40280.1 68418.m04886 protein farnesyltransferase beta subuni... 94 1e-19
At1g78500.1 68414.m09150 pentacyclic triterpene synthase, putati... 43 2e-04
At4g15370.1 68417.m02349 pentacyclic triterpene synthase, putati... 38 0.005
At5g42600.1 68418.m05186 pentacyclic triterpene synthase, putati... 38 0.007
At5g36150.1 68418.m04356 pentacyclic triterpene synthase, putati... 37 0.012
At1g66960.1 68414.m07614 lupeol synthase, putative / 2,3-oxidosq... 37 0.012
At5g48010.1 68418.m05933 pentacyclic triterpene synthase, putati... 35 0.048
At1g78960.1 68414.m09206 lupeol synthase, putative / 2,3-oxidosq... 33 0.15
At1g78950.1 68414.m09204 beta-amyrin synthase, putative similar ... 33 0.15
At4g15340.1 68417.m02346 pentacyclic triterpene synthase (04C11)... 33 0.26
At1g78970.2 68414.m09208 lupeol synthase (LUP1) / 2,3-oxidosqual... 32 0.34
At1g78970.1 68414.m09207 lupeol synthase (LUP1) / 2,3-oxidosqual... 32 0.34
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ... 32 0.34
At2g07050.1 68415.m00806 cycloartenol synthase (CAS1) / 2,3-epox... 31 0.78
At4g00530.1 68417.m00073 hypothetical protein 29 3.2
At2g04680.1 68415.m00478 DC1 domain-containing protein contains ... 29 4.2
At2g32460.1 68415.m03965 myb family transcription factor (MYB101... 28 5.5
At1g33410.1 68414.m04136 expressed protein 28 5.5
At5g35970.1 68418.m04332 DNA-binding protein, putative similar t... 28 7.3
At2g28460.1 68415.m03457 DC1 domain-containing protein contains ... 28 7.3
At1g07550.1 68414.m00808 leucine-rich repeat protein kinase, put... 28 7.3
>At5g12210.2 68418.m01433 geranylgeranyl transferase type II beta
subunit, putative / RAB geranylgeranyltransferase beta
subunit, putative similar to rab geranylgeranyl
transferase GB:CAA69383 GI:1552549 from [Homo sapiens]
Length = 320
Score = 299 bits (734), Expect = 1e-81
Identities = 125/224 (55%), Positives = 167/224 (74%)
Frame = -1
Query: 729 SAVQVXAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL 550
SAVQ+ A++D+++ +DI + Y+ LQ EDGSF GD WGEID RFS+ A+ CLS+L+ L
Sbjct: 93 SAVQILALFDKINILDIGKVSSYVAKLQNEDGSFSGDMWGEIDTRFSYIAICCLSILKCL 152
Query: 549 DAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWL 370
D I++ K V++++SC N DGGFG PG+ESHAG I+CCVG L+I + + D L WWL
Sbjct: 153 DKINVEKAVKYIVSCKNLDGGFGCTPGAESHAGQIFCCVGALAITGSLHHVDKDSLGWWL 212
Query: 369 CERQLPSGGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFS 190
CERQL +GGLNGRPEKL D+CYSWWV+SSL M++R+HW+DK L +FIL CQD + GG S
Sbjct: 213 CERQLKAGGLNGRPEKLADVCYSWWVLSSLIMIDRVHWIDKAKLVKFILDCQDLDNGGIS 272
Query: 189 DRPGDITDPFHTLFGLAGLSLLGNTSIKPVNPTYCMPQETIDRL 58
DRP D D FHT FG+AGLSLL +K ++P Y +P + ++R+
Sbjct: 273 DRPEDAVDIFHTYFGVAGLSLLEYPGVKVIDPAYALPVDVVNRI 316
Score = 75.8 bits (178), Expect = 3e-14
Identities = 46/195 (23%), Positives = 90/195 (46%)
Frame = -1
Query: 708 MYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRLDAIDINK 529
+ D+L V E ++ ++++ Q E G F G+ + ++ AV L+L +++ +DI K
Sbjct: 52 LLDKLGCVSEEEVISWLMTCQHESGGFAGNTGHDPHILYTLSAVQILALFDKINILDIGK 111
Query: 528 TVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPS 349
+V N DG F E Y + LSI K +D ++ ++ ++ +
Sbjct: 112 VSSYVAKLQNEDGSFSGDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLD 171
Query: 348 GGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFSDRPGDIT 169
GG P + + +L++ +H VDK SL ++ Q + GG + RP +
Sbjct: 172 GGFGCTPGAESHAGQIFCCVGALAITGSLHHVDKDSLGWWLCERQ-LKAGGLNGRPEKLA 230
Query: 168 DPFHTLFGLAGLSLL 124
D ++ + L+ L ++
Sbjct: 231 DVCYSWWVLSSLIMI 245
Score = 56.4 bits (130), Expect = 2e-08
Identities = 34/164 (20%), Positives = 80/164 (48%)
Frame = -1
Query: 669 VRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDG 490
VRYI+ ++++ SF + ++ + L LL +L + + + ++++C + G
Sbjct: 18 VRYILMAEKKE-SFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISWLMTCQHESG 76
Query: 489 GFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGGLNGRPEKLPDL 310
GF G + H V L++ +++ L +++ ++ + Q G +G D
Sbjct: 77 GFAGNTGHDPHILYTLSAVQILALFDKINILDIGKVSSYVAKLQNEDGSFSGDMWGEIDT 136
Query: 309 CYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFSDRPG 178
+S+ + LS+L + ++ + ++I++C++ + GGF PG
Sbjct: 137 RFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLD-GGFGCTPG 179
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = -1
Query: 444 YCCVGTLSICKRMDALHADELAWWLCERQLPSGGLNGRPEKLPDLCYSWWVMSSLSMLNR 265
Y + TL + ++ + +E+ WL Q SGG G P + Y+ + L++ ++
Sbjct: 44 YWGLTTLDLLDKLGCVSEEEVISWLMTCQHESGGFAGNTGHDPHILYTLSAVQILALFDK 103
Query: 264 IHWVDKKSLEEFILACQDYETGGFS-DRPGDITDPFHTLFGLAGLSLL 124
I+ +D + ++ Q+ E G FS D G+I F + + LS+L
Sbjct: 104 INILDIGKVSSYVAKLQN-EDGSFSGDMWGEIDTRF-SYIAICCLSIL 149
>At5g12210.1 68418.m01432 geranylgeranyl transferase type II beta
subunit, putative / RAB geranylgeranyltransferase beta
subunit, putative similar to rab geranylgeranyl
transferase GB:CAA69383 GI:1552549 from [Homo sapiens]
Length = 321
Score = 299 bits (734), Expect = 1e-81
Identities = 125/224 (55%), Positives = 167/224 (74%)
Frame = -1
Query: 729 SAVQVXAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL 550
SAVQ+ A++D+++ +DI + Y+ LQ EDGSF GD WGEID RFS+ A+ CLS+L+ L
Sbjct: 94 SAVQILALFDKINILDIGKVSSYVAKLQNEDGSFSGDMWGEIDTRFSYIAICCLSILKCL 153
Query: 549 DAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWL 370
D I++ K V++++SC N DGGFG PG+ESHAG I+CCVG L+I + + D L WWL
Sbjct: 154 DKINVEKAVKYIVSCKNLDGGFGCTPGAESHAGQIFCCVGALAITGSLHHVDKDSLGWWL 213
Query: 369 CERQLPSGGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFS 190
CERQL +GGLNGRPEKL D+CYSWWV+SSL M++R+HW+DK L +FIL CQD + GG S
Sbjct: 214 CERQLKAGGLNGRPEKLADVCYSWWVLSSLIMIDRVHWIDKAKLVKFILDCQDLDNGGIS 273
Query: 189 DRPGDITDPFHTLFGLAGLSLLGNTSIKPVNPTYCMPQETIDRL 58
DRP D D FHT FG+AGLSLL +K ++P Y +P + ++R+
Sbjct: 274 DRPEDAVDIFHTYFGVAGLSLLEYPGVKVIDPAYALPVDVVNRI 317
Score = 75.8 bits (178), Expect = 3e-14
Identities = 46/195 (23%), Positives = 90/195 (46%)
Frame = -1
Query: 708 MYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRLDAIDINK 529
+ D+L V E ++ ++++ Q E G F G+ + ++ AV L+L +++ +DI K
Sbjct: 53 LLDKLGCVSEEEVISWLMTCQHESGGFAGNTGHDPHILYTLSAVQILALFDKINILDIGK 112
Query: 528 TVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPS 349
+V N DG F E Y + LSI K +D ++ ++ ++ +
Sbjct: 113 VSSYVAKLQNEDGSFSGDMWGEIDTRFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLD 172
Query: 348 GGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFSDRPGDIT 169
GG P + + +L++ +H VDK SL ++ Q + GG + RP +
Sbjct: 173 GGFGCTPGAESHAGQIFCCVGALAITGSLHHVDKDSLGWWLCERQ-LKAGGLNGRPEKLA 231
Query: 168 DPFHTLFGLAGLSLL 124
D ++ + L+ L ++
Sbjct: 232 DVCYSWWVLSSLIMI 246
Score = 58.8 bits (136), Expect = 3e-09
Identities = 34/164 (20%), Positives = 79/164 (48%)
Frame = -1
Query: 669 VRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDG 490
VRYI+ +++ SF + ++ + L LL +L + + + ++++C + G
Sbjct: 18 VRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISWLMTCQHESG 77
Query: 489 GFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGGLNGRPEKLPDL 310
GF G + H V L++ +++ L +++ ++ + Q G +G D
Sbjct: 78 GFAGNTGHDPHILYTLSAVQILALFDKINILDIGKVSSYVAKLQNEDGSFSGDMWGEIDT 137
Query: 309 CYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFSDRPG 178
+S+ + LS+L + ++ + ++I++C++ + GGF PG
Sbjct: 138 RFSYIAICCLSILKCLDKINVEKAVKYIVSCKNLD-GGFGCTPG 180
Score = 39.9 bits (89), Expect = 0.002
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 1/138 (0%)
Frame = -1
Query: 534 NKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQL 355
+K V ++L F S Y + TL + ++ + +E+ WL Q
Sbjct: 15 DKHVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISWLMTCQH 74
Query: 354 PSGGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFS-DRPG 178
SGG G P + Y+ + L++ ++I+ +D + ++ Q+ E G FS D G
Sbjct: 75 ESGGFAGNTGHDPHILYTLSAVQILALFDKINILDIGKVSSYVAKLQN-EDGSFSGDMWG 133
Query: 177 DITDPFHTLFGLAGLSLL 124
+I F + + LS+L
Sbjct: 134 EIDTRF-SYIAICCLSIL 150
>At3g12070.2 68416.m01503 geranylgeranyl transferase type II beta
subunit, putative / RAB geranylgeranyltransferase beta
subunit, putative similar to geranylgeranyl transferase
type II beta subunit SP:P53611 [GI:1552549] [Homo
sapiens]
Length = 317
Score = 292 bits (716), Expect = 2e-79
Identities = 125/225 (55%), Positives = 165/225 (73%), Gaps = 1/225 (0%)
Frame = -1
Query: 729 SAVQVXAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL 550
SAVQ+ A++D+L+ +D+E + YI LQ EDGSF GD WGE+D RFS+ A+ CLS+L+ L
Sbjct: 89 SAVQILALFDKLNILDVEKVSNYIAGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILKCL 148
Query: 549 DAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWL 370
D I++ K V++++SC N DGGFG PG+ESHAG I+CCVG L+I + + D L WWL
Sbjct: 149 DKINVKKAVDYIVSCKNLDGGFGCSPGAESHAGQIFCCVGALAITGNLHRVDKDLLGWWL 208
Query: 369 CERQ-LPSGGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGF 193
CERQ SGGLNGRPEKLPD+CYSWWV+SSL M++R+HW++K L +FIL QD + GG
Sbjct: 209 CERQDYESGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIEKAKLVKFILDSQDMDNGGI 268
Query: 192 SDRPGDITDPFHTLFGLAGLSLLGNTSIKPVNPTYCMPQETIDRL 58
SDRP D FHT FG+AGLSLL +K ++P Y +P I+R+
Sbjct: 269 SDRPSYTVDIFHTYFGVAGLSLLEYPGVKTIDPAYALPVHVINRI 313
Score = 84.6 bits (200), Expect = 6e-17
Identities = 48/196 (24%), Positives = 93/196 (47%)
Frame = -1
Query: 711 AMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRLDAIDIN 532
A+ D+L +V + +V ++++ Q E G F G+ + ++ AV L+L +L+ +D+
Sbjct: 47 ALLDKLGSVSEDEVVSWVMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVE 106
Query: 531 KTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLP 352
K ++ N DG F E Y + LSI K +D ++ + ++ +
Sbjct: 107 KVSNYIAGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNL 166
Query: 351 SGGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFSDRPGDI 172
GG P + + +L++ +H VDK L ++ QDYE+GG + RP +
Sbjct: 167 DGGFGCSPGAESHAGQIFCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKL 226
Query: 171 TDPFHTLFGLAGLSLL 124
D ++ + L+ L ++
Sbjct: 227 PDVCYSWWVLSSLIMI 242
Score = 62.9 bits (146), Expect = 2e-10
Identities = 41/186 (22%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Frame = -1
Query: 669 VRYIVSLQQEDG--SFYGDKWGEIDXRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNF 496
+RYI++L E SF + ++ + L+LL +L ++ ++ V +V++C +
Sbjct: 11 LRYILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSWVMTCQHE 70
Query: 495 DGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGGLNGRPEKLP 316
GGF G + H V L++ +++ L ++++ ++ Q G +G
Sbjct: 71 SGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVEKVSNYIAGLQNEDGSFSGDIWGEV 130
Query: 315 DLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFSDRPGDITDPFHTLFGLAG 136
D +S+ + LS+L + ++ K ++I++C++ + GGF PG + +
Sbjct: 131 DTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLD-GGFGCSPGAESHAGQIFCCVGA 189
Query: 135 LSLLGN 118
L++ GN
Sbjct: 190 LAITGN 195
>At3g12070.1 68416.m01502 geranylgeranyl transferase type II beta
subunit, putative / RAB geranylgeranyltransferase beta
subunit, putative similar to geranylgeranyl transferase
type II beta subunit SP:P53611 [GI:1552549] [Homo
sapiens]
Length = 317
Score = 292 bits (716), Expect = 2e-79
Identities = 125/225 (55%), Positives = 165/225 (73%), Gaps = 1/225 (0%)
Frame = -1
Query: 729 SAVQVXAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL 550
SAVQ+ A++D+L+ +D+E + YI LQ EDGSF GD WGE+D RFS+ A+ CLS+L+ L
Sbjct: 89 SAVQILALFDKLNILDVEKVSNYIAGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILKCL 148
Query: 549 DAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWL 370
D I++ K V++++SC N DGGFG PG+ESHAG I+CCVG L+I + + D L WWL
Sbjct: 149 DKINVKKAVDYIVSCKNLDGGFGCSPGAESHAGQIFCCVGALAITGNLHRVDKDLLGWWL 208
Query: 369 CERQ-LPSGGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGF 193
CERQ SGGLNGRPEKLPD+CYSWWV+SSL M++R+HW++K L +FIL QD + GG
Sbjct: 209 CERQDYESGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHWIEKAKLVKFILDSQDMDNGGI 268
Query: 192 SDRPGDITDPFHTLFGLAGLSLLGNTSIKPVNPTYCMPQETIDRL 58
SDRP D FHT FG+AGLSLL +K ++P Y +P I+R+
Sbjct: 269 SDRPSYTVDIFHTYFGVAGLSLLEYPGVKTIDPAYALPVHVINRI 313
Score = 84.6 bits (200), Expect = 6e-17
Identities = 48/196 (24%), Positives = 93/196 (47%)
Frame = -1
Query: 711 AMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRLDAIDIN 532
A+ D+L +V + +V ++++ Q E G F G+ + ++ AV L+L +L+ +D+
Sbjct: 47 ALLDKLGSVSEDEVVSWVMTCQHESGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVE 106
Query: 531 KTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLP 352
K ++ N DG F E Y + LSI K +D ++ + ++ +
Sbjct: 107 KVSNYIAGLQNEDGSFSGDIWGEVDTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNL 166
Query: 351 SGGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFSDRPGDI 172
GG P + + +L++ +H VDK L ++ QDYE+GG + RP +
Sbjct: 167 DGGFGCSPGAESHAGQIFCCVGALAITGNLHRVDKDLLGWWLCERQDYESGGLNGRPEKL 226
Query: 171 TDPFHTLFGLAGLSLL 124
D ++ + L+ L ++
Sbjct: 227 PDVCYSWWVLSSLIMI 242
Score = 62.9 bits (146), Expect = 2e-10
Identities = 41/186 (22%), Positives = 89/186 (47%), Gaps = 2/186 (1%)
Frame = -1
Query: 669 VRYIVSLQQEDG--SFYGDKWGEIDXRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNF 496
+RYI++L E SF + ++ + L+LL +L ++ ++ V +V++C +
Sbjct: 11 LRYILNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSEDEVVSWVMTCQHE 70
Query: 495 DGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGGLNGRPEKLP 316
GGF G + H V L++ +++ L ++++ ++ Q G +G
Sbjct: 71 SGGFAGNTGHDPHVLYTLSAVQILALFDKLNILDVEKVSNYIAGLQNEDGSFSGDIWGEV 130
Query: 315 DLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGFSDRPGDITDPFHTLFGLAG 136
D +S+ + LS+L + ++ K ++I++C++ + GGF PG + +
Sbjct: 131 DTRFSYIAICCLSILKCLDKINVKKAVDYIVSCKNLD-GGFGCSPGAESHAGQIFCCVGA 189
Query: 135 LSLLGN 118
L++ GN
Sbjct: 190 LAITGN 195
>At2g39550.1 68415.m04852 geranylgeranyl transferase type I beta
subunit (GGT-IB) nearly identical to GI:11878247
Length = 375
Score = 140 bits (338), Expect = 1e-33
Identities = 73/218 (33%), Positives = 114/218 (52%), Gaps = 12/218 (5%)
Frame = -1
Query: 696 LDAVDIEGIVRYIVSLQQEDGSFYGDK-WGEIDXRFSFCAVMCLSLLQRLDAIDINKTVE 520
L +D + ++ +++LQQ+DGSF GE D RF +CA +L +D
Sbjct: 152 LSTIDSKSLLISMINLQQDDGSFMPIHIGGETDLRFVYCAAAICYMLDSWSGMDKESAKN 211
Query: 519 FVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICK--RMDALHADE---------LAWW 373
++L+C ++DGGFG PGSESH G YC + +L + +D L D L W
Sbjct: 212 YILNCQSYDGGFGLIPGSESHGGATYCAIASLRLMGYIGVDLLSNDSSSSIIDPSLLLNW 271
Query: 372 LCERQLPSGGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETGGF 193
+RQ GG GR K D CY++W+ + L ++ +DK +L +F+++CQ + GGF
Sbjct: 272 CLQRQANDGGFQGRTNKPSDTCYAFWIGAVLKLIGGDALIDKMALRKFLMSCQS-KYGGF 330
Query: 192 SDRPGDITDPFHTLFGLAGLSLLGNTSIKPVNPTYCMP 79
S PG + D +H+ +G SLL + P+ P +P
Sbjct: 331 SKFPGQLPDLYHSYYGYTAFSLLEEQGLSPLCPELGLP 368
Score = 39.5 bits (88), Expect = 0.002
Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 11/163 (6%)
Frame = -1
Query: 726 AVQVXAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL- 550
A + M D +D E YI++ Q DG F E ++CA+ L L+ +
Sbjct: 191 AAAICYMLDSWSGMDKESAKNYILNCQSYDGGFGLIPGSESHGGATYCAIASLRLMGYIG 250
Query: 549 ----------DAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDA 400
ID + + + L DGGF + S + L +
Sbjct: 251 VDLLSNDSSSSIIDPSLLLNWCLQRQANDGGFQGRTNKPSDTCYAFWIGAVLKLIGGDAL 310
Query: 399 LHADELAWWLCERQLPSGGLNGRPEKLPDLCYSWWVMSSLSML 271
+ L +L Q GG + P +LPDL +S++ ++ S+L
Sbjct: 311 IDKMALRKFLMSCQSKYGGFSKFPGQLPDLYHSYYGYTAFSLL 353
>At5g40280.1 68418.m04886 protein farnesyltransferase beta subunit
(ERA1) identical to GI:8347240 [SWISS-PROT:Q38920];
WIGGUM mutant
Length = 482
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/146 (30%), Positives = 75/146 (51%)
Frame = -1
Query: 696 LDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRLDAIDINKTVEF 517
L +++ E + ++ ++ G F GE+D R + A+ S+L +D ++
Sbjct: 177 LSSINREKMSCFLRRMKDTSGGFRMHDMGEMDVRACYTAISVASILNIMDDELTQGLGDY 236
Query: 516 VLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMDALHADELAWWLCERQLPSGGLN 337
+LSC ++GG G +PGSE+H G YC + + + +D L+ D L W RQ G
Sbjct: 237 ILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINEVDRLNLDSLMNWAVHRQGVEMGFQ 296
Query: 336 GRPEKLPDLCYSWWVMSSLSMLNRIH 259
GR KL D CY++W + +L R++
Sbjct: 297 GRTNKLVDGCYTFWQAAPCVLLQRLY 322
Score = 58.8 bits (136), Expect = 3e-09
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 3/145 (2%)
Frame = -1
Query: 549 DAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVG---TLSICKRMDALHADELA 379
D ++ N ++F+ C +GG+G PG H Y V TL K + +++ ++++
Sbjct: 128 DELESN-AIDFLGRCQGSEGGYGGGPGQLPHLATTYAAVNALVTLGGDKALSSINREKMS 186
Query: 378 WWLCERQLPSGGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFILACQDYETG 199
+L + SGG D+ + +S S+LN + + L ++IL+CQ YE G
Sbjct: 187 CFLRRMKDTSGGFRMHDMGEMDVRACYTAISVASILNIMDDELTQGLGDYILSCQTYE-G 245
Query: 198 GFSDRPGDITDPFHTLFGLAGLSLL 124
G PG +T GLA + L+
Sbjct: 246 GIGGEPGSEAHGGYTYCGLAAMILI 270
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/153 (22%), Positives = 62/153 (40%)
Frame = -1
Query: 582 AVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFGSKPGSESHAGLIYCCVGTLSICKRMD 403
A++ L + L +I+ K F+ + GGF E Y + SI MD
Sbjct: 167 ALVTLGGDKALSSINREKMSCFLRRMKDTSGGFRMHDMGEMDVRACYTAISVASILNIMD 226
Query: 402 ALHADELAWWLCERQLPSGGLNGRPEKLPDLCYSWWVMSSLSMLNRIHWVDKKSLEEFIL 223
L ++ Q GG+ G P Y++ ++++ ++N + ++ SL + +
Sbjct: 227 DELTQGLGDYILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINEVDRLNLDSLMNWAV 286
Query: 222 ACQDYETGGFSDRPGDITDPFHTLFGLAGLSLL 124
Q E GF R + D +T + A LL
Sbjct: 287 HRQGVEM-GFQGRTNKLVDGCYTFWQAAPCVLL 318
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -1
Query: 252 DKKSLEEFILACQDYETGGFSDRPGDITDPFHTLFGLAGLSLLGNTSIK 106
D L+ ++L C GGF D+P D +HT + L+GLS+ + +K
Sbjct: 390 DSLGLQRYVLLCSKIPDGGFRDKPRKPRDFYHTCYCLSGLSVAQHAWLK 438
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/82 (19%), Positives = 42/82 (51%)
Frame = -1
Query: 729 SAVQVXAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL 550
+A+ V ++ + +D +G+ YI+S Q +G G+ E +++C + + L+ +
Sbjct: 214 TAISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINEV 273
Query: 549 DAIDINKTVEFVLSCMNFDGGF 484
D ++++ + + + + GF
Sbjct: 274 DRLNLDSLMNWAVHRQGVEMGF 295
>At1g78500.1 68414.m09150 pentacyclic triterpene synthase, putative
similar to pentacyclic triterpene synthase (04C11)
[gi:6650208] [PMID:11247608]; similar to beta-Amyrin
Synthase GI:3688600 from [Panax ginseng]
Length = 767
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = -1
Query: 681 IEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL--DAIDINKTVEFVLS 508
I+ V+YI S Q DGS+YG+ WG +F AV L + + I K V+F+L
Sbjct: 598 IKNAVKYIESFQMPDGSWYGN-WGVCFMYGTFFAVRGLVAAGKTYQNCEPIRKAVQFILE 656
Query: 507 CMNFDGGFG 481
N +GG+G
Sbjct: 657 TQNVEGGWG 665
>At4g15370.1 68417.m02349 pentacyclic triterpene synthase, putative
similar to pentacyclic triterpene synthase [gi:6650208]
[PMID:11247608]
Length = 759
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = -1
Query: 669 VRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL--DAIDINKTVEFVLSCMNF 496
V+YI LQ DGS+YG+ WG +F AV L + + I + V F+L N
Sbjct: 596 VKYIEDLQMVDGSWYGN-WGVCFIYGTFFAVRGLVAAGKCYNNCEAIRRAVRFILDTQNT 654
Query: 495 DGGFG 481
+GG+G
Sbjct: 655 EGGWG 659
>At5g42600.1 68418.m05186 pentacyclic triterpene synthase, putative
similar to pentacyclic triterpene synthase [gi:6650207]
[PMID: 11247608]
Length = 761
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = -1
Query: 669 VRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL--DAIDINKTVEFVLSCMNF 496
++YI LQ DGS+YG+ WG + AV L+ + ++ I + V+F+L+ N
Sbjct: 597 LKYIEDLQMPDGSWYGN-WGVCFTYGTLFAVRGLAAAGKTFGNSEAIRRAVQFILNTQNA 655
Query: 495 DGGFG 481
+GG+G
Sbjct: 656 EGGWG 660
>At5g36150.1 68418.m04356 pentacyclic triterpene synthase, putative
similar to pentacyclic triterpene synthase [gi:6650208]
[PMID:11247608]; oxidosqualene cyclase; also highly
similar to beta-amyrin synthase, lupeol synthase,
cycloartenol synthase
Length = 729
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = -1
Query: 669 VRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCL-SLLQRLDAID-INKTVEFVLSCMNF 496
V+YI SLQ DGS+YG+ WG +F AV L + D + I + V F+L N
Sbjct: 596 VKYIESLQIADGSWYGN-WGICFIYGTFFAVRGLVAAGNTYDNCEAIRRAVRFLLDIQNG 654
Query: 495 DGGFG 481
+GG+G
Sbjct: 655 EGGWG 659
>At1g66960.1 68414.m07614 lupeol synthase, putative /
2,3-oxidosqualene-triterpenoid cyclase, putative similar
to lupeol synthase GI:1762150 from [Arabidopsis
thaliana], 2,3-oxidosqualene-triterpenoid cyclase
[Arabidopsis thaliana] GI:2738027
Length = 763
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = -1
Query: 681 IEGIVRYIVSLQQEDGSFYGDKWG---EIDXRFSFCAVMCLSLLQRLDAIDINKTVEFVL 511
IE V++I S Q DGS+YG WG F+ C + + + + + V F+L
Sbjct: 592 IEKAVQFIESKQLRDGSWYG-SWGICFTYGTWFALCGLAAIGKTYN-NCLSMRDGVHFLL 649
Query: 510 SCMNFDGGFG 481
+ N DGG+G
Sbjct: 650 NIQNEDGGWG 659
>At5g48010.1 68418.m05933 pentacyclic triterpene synthase, putative
similar to pentacyclic triterpene synthase [gi:6650207]
[PMID: 11247608] Contains Pfam domain PF00432:
Prenyltransferase and squalene oxidase repeat
Length = 758
Score = 35.1 bits (77), Expect = 0.048
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -1
Query: 666 RYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL--DAIDINKTVEFVLSCMNFD 493
+YI +Q DGS+YG+ WG +F AV L + + I K V F+L N +
Sbjct: 594 KYIEDMQTVDGSWYGN-WGVCFIYGTFFAVRGLVAAGKTYSNCEAIRKAVRFLLDTQNPE 652
Query: 492 GGFG 481
GG+G
Sbjct: 653 GGWG 656
>At1g78960.1 68414.m09206 lupeol synthase, putative /
2,3-oxidosqualene-triterpenoid cyclase, putative similar
to lupeol synthase GI:1762150 from [Arabidopsis
thaliana], 2,3-oxidosqualene-triterpenoid cyclase
[Arabidopsis thaliana] GI:2738027
Length = 763
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = -1
Query: 681 IEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL--DAIDINKTVEFVLS 508
IE V++I S Q DGS++G+ WG ++ A+ L+ + + + K V+F+L+
Sbjct: 592 IEKGVQFIESKQTPDGSWHGN-WGICFIYATWFALSGLAAAGKTYKSCLAVRKGVDFLLA 650
Query: 507 CMNFDGGFG 481
DGG+G
Sbjct: 651 IQEEDGGWG 659
>At1g78950.1 68414.m09204 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 759
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = -1
Query: 681 IEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL--DAIDINKTVEFVLS 508
I+ Y+ ++Q DGS+YG+ WG ++ A+ L+ + D I K V+F+L+
Sbjct: 592 IKKAAEYLENMQTRDGSWYGN-WGICFTYGTWFALAGLAAAGKTFNDCEAIRKGVQFLLA 650
Query: 507 CMNFDGGFG 481
+GG+G
Sbjct: 651 AQKDNGGWG 659
>At4g15340.1 68417.m02346 pentacyclic triterpene synthase (04C11)
identical to pentacyclic triterpene synthase
[gi:6650208] [PMID:11247608]
Length = 766
Score = 32.7 bits (71), Expect = 0.26
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = -1
Query: 669 VRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL--DAIDINKTVEFVLSCMNF 496
V+YI LQ +DGS+ G+ WG + AV L + + I + V F+L N
Sbjct: 601 VKYIEDLQMKDGSWCGN-WGVCFIYGTLFAVRGLVAAGKTFHNCEPIRRAVRFLLDTQNQ 659
Query: 495 DGGFG 481
+GG+G
Sbjct: 660 EGGWG 664
>At1g78970.2 68414.m09208 lupeol synthase (LUP1) /
2,3-oxidosqualene-triterpenoid cyclase identical to
lupeol synthase GI:1762150 from [Arabidopsis thaliana],
2,3-oxidosqualene-triterpenoid cyclase [Arabidopsis
thaliana] GI:2738027; contains Pfam profile PF00432:
Prenyltransferase and squalene oxidase repeat; contains
TIGRfam profile TIGR01787: squalene/oxidosqualene
cyclases; identical to cDNA
2,3-oxidosqualene-triterpenoid cyclase GI:2738026
Length = 757
Score = 32.3 bits (70), Expect = 0.34
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 681 IEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL--DAIDINKTVEFVLS 508
IE V++I Q DGS+YG+ WG ++ A+ L+ D + + V F+L+
Sbjct: 589 IEKAVQFIQDNQTPDGSWYGN-WGVCFIYATWFALGGLAAAGETYNDCLAMRNGVHFLLT 647
Query: 507 CMNFDGGFG 481
DGG+G
Sbjct: 648 TQRDDGGWG 656
Score = 31.5 bits (68), Expect = 0.59
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -1
Query: 669 VRYIVSLQQEDGSFYGDKWGEID--XRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNF 496
VRY +LQ DG + G+ G + FC + L + DA + + + N
Sbjct: 103 VRYFTALQASDGHWPGEITGPLFFLPPLIFCLYITGHLEEVFDAEHRKEMLRHIYCHQNE 162
Query: 495 DGGFGSKPGSESHAGLIYCCVGTLSICKRM 406
DGG+G S+S +++C V IC RM
Sbjct: 163 DGGWGLHIESKS---VMFCTVLNY-ICLRM 188
>At1g78970.1 68414.m09207 lupeol synthase (LUP1) /
2,3-oxidosqualene-triterpenoid cyclase identical to
lupeol synthase GI:1762150 from [Arabidopsis thaliana],
2,3-oxidosqualene-triterpenoid cyclase [Arabidopsis
thaliana] GI:2738027; contains Pfam profile PF00432:
Prenyltransferase and squalene oxidase repeat; contains
TIGRfam profile TIGR01787: squalene/oxidosqualene
cyclases; identical to cDNA
2,3-oxidosqualene-triterpenoid cyclase GI:2738026
Length = 757
Score = 32.3 bits (70), Expect = 0.34
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 681 IEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL--DAIDINKTVEFVLS 508
IE V++I Q DGS+YG+ WG ++ A+ L+ D + + V F+L+
Sbjct: 589 IEKAVQFIQDNQTPDGSWYGN-WGVCFIYATWFALGGLAAAGETYNDCLAMRNGVHFLLT 647
Query: 507 CMNFDGGFG 481
DGG+G
Sbjct: 648 TQRDDGGWG 656
Score = 31.5 bits (68), Expect = 0.59
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -1
Query: 669 VRYIVSLQQEDGSFYGDKWGEID--XRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNF 496
VRY +LQ DG + G+ G + FC + L + DA + + + N
Sbjct: 103 VRYFTALQASDGHWPGEITGPLFFLPPLIFCLYITGHLEEVFDAEHRKEMLRHIYCHQNE 162
Query: 495 DGGFGSKPGSESHAGLIYCCVGTLSICKRM 406
DGG+G S+S +++C V IC RM
Sbjct: 163 DGGWGLHIESKS---VMFCTVLNY-ICLRM 188
>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 769
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = -1
Query: 681 IEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL--DAIDINKTVEFVLS 508
I+ V+YI S+Q DGS+YG WG ++ + L+ + + + + K V F+L+
Sbjct: 592 IKKAVQYIESIQMLDGSWYG-SWGVCFTYSTWFGLGGLAAAGKTYNNCLAMRKGVHFLLT 650
Query: 507 CMNFDGGFG 481
+GG+G
Sbjct: 651 TQKDNGGWG 659
>At2g07050.1 68415.m00806 cycloartenol synthase (CAS1) /
2,3-epoxysqualene--cycloartenol cyclase /
(S)-2,3-epoxysqualene mutase identical to cycloartenol
synthase [SP:P38605 | GI:452446] [PMID:7505443]
Length = 759
Score = 31.1 bits (67), Expect = 0.78
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -1
Query: 681 IEGIVRYIVSLQQEDGSFYGDKWGEIDXRFSFCAVMCLSLLQRL--DAIDINKTVEFVLS 508
IE V++I S+Q DGS+YG W ++ V L + + ++ + K EF+LS
Sbjct: 589 IEKAVKFIESIQAADGSWYG-SWAVCFTYGTWFGVKGLVAVGKTLKNSPHVAKACEFLLS 647
Query: 507 CMNFDGGFG 481
GG+G
Sbjct: 648 KQQPSGGWG 656
>At4g00530.1 68417.m00073 hypothetical protein
Length = 94
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = -1
Query: 300 WWVMSSLSMLNRIHWVDKKSLEEFILACQD 211
WWVM L ML HW+ +K ILA QD
Sbjct: 47 WWVMLHLFMLVIEHWIKRK-----ILAAQD 71
>At2g04680.1 68415.m00478 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 657
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 586 LCGNVSITLTTIGCHRHQQDCGVCAQ 509
+C N S L T C++ CG+C Q
Sbjct: 436 VCNNTSFILFTDSCNKANASCGLCKQ 461
>At2g32460.1 68415.m03965 myb family transcription factor (MYB101)
identical to putative transcription factor MYB101
GI:18087348 from [Arabidopsis thaliana]
Length = 490
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 92 VGLTGFILVLPSNERPARPNNVWNGSVMSPGLSLKPP 202
+GL +L LPSN+RP ++ + ++ G+ L+PP
Sbjct: 292 LGLDNSVLELPSNQRPT--HSFSSSPIIDNGVHLEPP 326
>At1g33410.1 68414.m04136 expressed protein
Length = 1459
Score = 28.3 bits (60), Expect = 5.5
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Frame = +3
Query: 216 DMLR*ILLSFSCLPSEFYSALKVKT*PTKSSTNLAVFPVDHSDH-------HWAAVVHIA 374
D R + +S PS LK+ T + + +VFP+DH H + + V +A
Sbjct: 121 DSGRLVYFLYSLTPSGVVYVLKLSN--TLAYKSGSVFPLDHLIHLDVRPYLNESRVTSVA 178
Query: 375 TTPARLRVGRPCACISTVYP 434
+P + +GR C+S P
Sbjct: 179 ASPGFIFLGRSDGCVSCFQP 198
>At5g35970.1 68418.m04332 DNA-binding protein, putative similar to
SWISS-PROT:Q60560 DNA-binding protein SMUBP-2
(Immunoglobulin MU binding protein 2, SMUBP-2)
[Mesocricetus auratus]
Length = 961
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 343 TTTGQLSFT*PPRQLVCV*GVHALAYRQCTHTAVN 447
T T +FT PP VCV GV R+ + VN
Sbjct: 19 TATAAFTFTRPPLNYVCVVGVRVFPTRKVFCSGVN 53
>At2g28460.1 68415.m03457 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 704
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 467 DPGLEPNPPSKFMQLSTNSTVLLMSMASN 553
D L+P P S+FM L+T LL SM S+
Sbjct: 34 DLDLQPKPESEFMSLTTQIFSLLHSMDSD 62
>At1g07550.1 68414.m00808 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 864
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 8 KTFILENXICSLCGFSFSLSIVSCGMQYVGLTGFILVLPSNERPARPN 151
K + EN IC CG F + V+ + V + +LVL R +P+
Sbjct: 487 KLLVDENMICVSCGTRFPTAAVAASVSAVAIIILVLVLIFVLRRRKPS 534
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,278,190
Number of Sequences: 28952
Number of extensions: 389037
Number of successful extensions: 1080
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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