Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F08
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0945 - 22791754-22791863,22792295-22792367,22792457-227925... 66 1e-11
11_04_0392 + 17131839-17131943,17134182-17134258,17134385-171344... 60 1e-09
11_06_0315 + 22318155-22318210,22319743-22319769,22319868-223199... 60 1e-09
03_02_0377 - 7898075-7898605,7900782-7901000,7901079-7901142,790... 58 3e-09
08_02_0954 + 22989780-22989883,22989980-22990160,22990218-22990316 57 7e-09
10_02_0078 - 4992019-4992594,4993156-4993248,4995984-4996202,499... 56 2e-08
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581... 54 5e-08
09_04_0341 + 16820890-16820993,16821082-16821269,16821412-16821416 53 2e-07
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 53 2e-07
02_05_0743 + 31425827-31425888,31426733-31426759,31426840-314269... 49 2e-06
06_01_0865 - 6571056-6571190,6571737-6571977,6572279-6572401,657... 47 8e-06
09_06_0070 - 20670387-20670473,20672418-20672645,20673388-206735... 44 7e-05
11_01_0354 + 2665570-2665601,2665796-2665894,2667158-2667202,266... 39 0.002
12_01_0375 + 2930807-2930838,2930936-2930999,2931127-2931333,293... 33 0.13
04_04_1438 - 33609242-33609349,33609571-33609663,33609840-336098... 29 2.8
09_02_0511 - 10079180-10079355,10079656-10079722,10080144-100801... 28 3.7
01_05_0148 + 18609853-18610058,18610347-18612669 28 3.7
05_01_0431 + 3412178-3412336,3413012-3413109,3413185-3413312,341... 28 5.0
05_07_0288 + 29001228-29001399,29001493-29001723,29001817-290019... 27 6.5
03_06_0371 + 33435936-33436472,33436554-33436741,33437146-334372... 27 6.5
03_02_0165 + 6083059-6084252,6084664-6084741 27 6.5
08_02_0501 + 17836948-17837373,17837857-17839184,17839270-178393... 27 8.7
>07_03_0945 -
22791754-22791863,22792295-22792367,22792457-22792552,
22793268-22793331,22793957-22794008,22794525-22794622,
22795108-22795166,22795981-22796013
Length = 194
Score = 66.5 bits (155), Expect = 1e-11
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = -1
Query: 508 KWLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY 329
+WL YW Y FSI E F+D I+ P Y+ +K ++W P+ +G+ +Y R +RP+
Sbjct: 57 RWLLYWAAYGSFSIAEIFADQILSSVPFYYHVKFAILVWLQFPSN-SGAKHVYRRYMRPF 115
Query: 328 YQKHHGRIDDMAN 290
+ KH +ID + N
Sbjct: 116 FLKHQAKIDRILN 128
>11_04_0392 +
17131839-17131943,17134182-17134258,17134385-17134411,
17134512-17134634,17134738-17134981,17135081-17135098
Length = 197
Score = 60.1 bits (139), Expect = 1e-09
Identities = 22/64 (34%), Positives = 39/64 (60%)
Frame = -1
Query: 508 KWLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY 329
+WL YW +Y+ ++VE + ++ W P+++ LK +F+ W LP + G+ IY R +R
Sbjct: 87 QWLAYWILYSFITLVEMLLESLIYWIPIWYELKLLFIAWLALP-NFRGAAFIYNRFVREQ 145
Query: 328 YQKH 317
+KH
Sbjct: 146 LRKH 149
>11_06_0315 +
22318155-22318210,22319743-22319769,22319868-22319990,
22320867-22321110,22321487-22321981
Length = 314
Score = 59.7 bits (138), Expect = 1e-09
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = -1
Query: 508 KWLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY 329
+WLTYW +Y+ ++ E I+ W P + +K IF+ W LP +NG+ +Y +RP
Sbjct: 45 QWLTYWVMYSLITLFELTFASIIQWLPFWPSMKLIFICWLVLP-YFNGAAFVYQNYVRPM 103
Query: 328 YQKH 317
+ KH
Sbjct: 104 FVKH 107
>03_02_0377 -
7898075-7898605,7900782-7901000,7901079-7901142,
7901226-7901282,7901373-7901471,7901744-7901793,
7902378-7902422,7902967-7903062
Length = 386
Score = 58.4 bits (135), Expect = 3e-09
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = -1
Query: 505 WLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYY 326
W YW + A +++E F DF + W P Y K +F I+ + P + G+ IY RPY
Sbjct: 93 WCQYWILVALMTVMERFGDFTISWLPFYSEAKLMFFIYLWYP-KTKGTTYIYGTFFRPYI 151
Query: 325 QKHHGRID 302
+H ID
Sbjct: 152 SQHENEID 159
>08_02_0954 + 22989780-22989883,22989980-22990160,22990218-22990316
Length = 127
Score = 57.2 bits (132), Expect = 7e-09
Identities = 20/67 (29%), Positives = 43/67 (64%)
Frame = -1
Query: 508 KWLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY 329
+WL YW +Y+ +++E ++ ++ W P+++ +K +FV W LP ++ G+ IY +++R
Sbjct: 11 QWLAYWILYSFITLLEMVAEPVLYWIPVWYPVKVLFVAWLVLP-QFKGASFIYKKLVREQ 69
Query: 328 YQKHHGR 308
+K+ R
Sbjct: 70 LRKYRAR 76
>10_02_0078 -
4992019-4992594,4993156-4993248,4995984-4996202,
4996282-4996345,4996429-4996485,4996573-4996671,
4997296-4997327
Length = 379
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = -1
Query: 505 WLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYY 326
W YW + A +++E F DF + W PLY K +F I+ + P G+ +Y RPY
Sbjct: 40 WCQYWILVALLTVLERFGDFAISWLPLYSEAKLMFFIYLWCP-RTKGTSYVYETFFRPYI 98
Query: 325 QKHHGRID 302
++ ID
Sbjct: 99 SQYENDID 106
>01_06_0575 - 30357556-30357582,30357698-30357944,30358039-30358161,
30358275-30358301,30358475-30358633,30359764-30359948,
30360225-30360293,30360432-30362354,30363018-30363339,
30363506-30363543
Length = 1039
Score = 54.4 bits (125), Expect = 5e-08
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = -1
Query: 508 KWLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY 329
+WLTYW +Y+ ++ E ++ WFPL+ +K +F W LP +NG+ IY +R Y
Sbjct: 925 QWLTYWVLYSLITLFELSCWKVLQWFPLWPYMKLLFCCWLVLPI-FNGAAYIYETHVRRY 983
Query: 328 YQ 323
++
Sbjct: 984 FK 985
>09_04_0341 + 16820890-16820993,16821082-16821269,16821412-16821416
Length = 98
Score = 52.8 bits (121), Expect = 2e-07
Identities = 20/70 (28%), Positives = 41/70 (58%)
Frame = -1
Query: 508 KWLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY 329
+WL YW +Y+ +++E ++ W PL++ K +FV W LP ++ G+ IY + +R
Sbjct: 11 QWLVYWILYSLITLMEMALHKVLYWIPLWYEAKVLFVAWLVLP-QFRGASFIYDKFVREQ 69
Query: 328 YQKHHGRIDD 299
+K+ ++ +
Sbjct: 70 LKKNRVKLHE 79
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -1
Query: 505 WLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLP--TEYNGSLVIYYRIIRP 332
W YW + A ++ E D V W P+Y K F+++ + P + G+ +Y +P
Sbjct: 40 WCQYWILLAVLTVFERVGDNFVSWLPMYSEAKLAFIVYLWYPKTQHFQGTSYVYESFFKP 99
Query: 331 YYQKHHGRID 302
Y KH ID
Sbjct: 100 YIGKHEAEID 109
>02_05_0743 +
31425827-31425888,31426733-31426759,31426840-31426962,
31427252-31427492,31427655-31427780
Length = 192
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = -1
Query: 508 KWLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRP 332
+WLTYW +Y+ ++ E ++ W PL+ K F W LP +NG+ +Y +RP
Sbjct: 47 QWLTYWVLYSFITLFELTFSPVLEWLPLWSYAKLFFNCWLVLP-YFNGAAHVYEHFVRP 104
>06_01_0865 -
6571056-6571190,6571737-6571977,6572279-6572401,
6572501-6572527,6573954-6574009
Length = 193
Score = 47.2 bits (107), Expect = 8e-06
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = -1
Query: 508 KWLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY 329
+WLTYW +Y+ ++ E ++ W P + K F W LP ++G+ +Y +RP
Sbjct: 45 QWLTYWVLYSFITLFELTFAPVIEWLPFWSYAKLFFNCWLVLPC-FHGAAYVYDHFVRPM 103
Query: 328 Y 326
+
Sbjct: 104 F 104
>09_06_0070 -
20670387-20670473,20672418-20672645,20673388-20673508,
20673604-20673702,20673802-20673833
Length = 188
Score = 44.0 bits (99), Expect = 7e-05
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = -1
Query: 505 WLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYY 326
W YW + A + +E + F V W P+Y K V++ + P + G+ +Y ++P
Sbjct: 40 WCQYWILLAFLTTLETITYFTVSWLPMYGEAKLALVLYLWYP-KTRGAKHVYESYLQPVL 98
Query: 325 QKHHGRID 302
+H ID
Sbjct: 99 ARHEADID 106
>11_01_0354 +
2665570-2665601,2665796-2665894,2667158-2667202,
2667293-2667356,2667497-2667709,2669960-2670160
Length = 217
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -1
Query: 505 WLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYY 326
W YW + + E F V W P+Y +K F ++ + P + GS V+Y IRP
Sbjct: 40 WCQYWIIVSMVIACESF----VSWMPMYGEIKLAFFVYLWYP-KTKGSDVVYDSFIRPTV 94
Query: 325 QKHHGRID 302
++ I+
Sbjct: 95 MQYEPNIE 102
>12_01_0375 +
2930807-2930838,2930936-2930999,2931127-2931333,
2932385-2932458,2932831-2932858,2933268-2933456
Length = 197
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = -1
Query: 445 IVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHGRID 302
++ W P+Y +K F ++ + P + GS V+Y +RP ++ I+
Sbjct: 8 LISWMPMYGEIKLAFFVYLWYP-KTKGSDVVYDTFLRPIVMQYEPNIE 54
>04_04_1438 -
33609242-33609349,33609571-33609663,33609840-33609884,
33610000-33610055,33610362-33610468,33610605-33610806,
33611068-33611122,33611129-33611167,33611664-33611725,
33611875-33611988,33612618-33612627,33612750-33612835,
33613008-33613377
Length = 448
Score = 28.7 bits (61), Expect = 2.8
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Frame = +2
Query: 239 FINRFIEVFNDIIHGICVGHIIDTTMVLLVVRTNDTVVDHQGPVV-----FSRQVAPDHE 403
F N + V N I+ G + + T V + + ++ V H+ P++ FS AP
Sbjct: 245 FGNTQMTVNNQIVIGTLMNLADNPTRVSIGQKWRESDVTHRVPIIVTGNDFSTLYAPLIR 304
Query: 404 DAL*QPVQWKPADDEIGKVLH 466
D + W+P ++I ++H
Sbjct: 305 DGRMEKFYWQPGREDIINIVH 325
>09_02_0511 -
10079180-10079355,10079656-10079722,10080144-10080181,
10080255-10080336
Length = 120
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 457 FSDFIVGWFPLYWLLKCIFVI 395
+S+ IV WFP++ CIFVI
Sbjct: 84 YSNGIVQWFPVFEYWSCIFVI 104
>01_05_0148 + 18609853-18610058,18610347-18612669
Length = 842
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 354 ITRDPLYSVGR*HQITKMHFNSQYNGNQ 437
+ DPL S+ R +T++HF YNG +
Sbjct: 714 LKEDPLPSLSRLLNLTELHFTRAYNGEK 741
>05_01_0431 +
3412178-3412336,3413012-3413109,3413185-3413312,
3413770-3413881,3414309-3414489,3414714-3414896,
3415133-3415315,3416062-3416131,3416413-3416522,
3416604-3416908,3417079-3417175,3417622-3417765,
3418217-3418303,3418387-3418473,3418566-3418706,
3418805-3418930,3419166-3419264,3419690-3419757,
3420275-3420341,3420713-3420883,3420959-3421048,
3421831-3421911,3423397-3423470,3423784-3423855,
3423925-3424017,3424138-3424204
Length = 1030
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 313 GRIDDMANTDPMNDIIKDLNESIDKTMTA 227
GR DD +T PM+D+I L+ ++K +TA
Sbjct: 371 GRADDDDDT-PMDDVINGLDADLEKQITA 398
>05_07_0288 +
29001228-29001399,29001493-29001723,29001817-29001914,
29002687-29002873,29003068-29003198,29003282-29003908
Length = 481
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 123 GSIIIFFDCIKTAF*SCFPASDTKYVYSFLSVLLKAVIVLS-IDSLRSLMISFMGSVL 293
GSI++ DC++ + P K +Y F+ V+ + +LS + S SL +GS+L
Sbjct: 157 GSILLAADCLQIMYSDLAPNGPLK-LYHFIIVVAVVLSLLSQLPSFHSLRYINLGSLL 213
>03_06_0371 +
33435936-33436472,33436554-33436741,33437146-33437245,
33437360-33437545,33438977-33439186,33439772-33439959,
33440083-33440341
Length = 555
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -1
Query: 391 CYLPTEYNGSLVIYYRIIRPYYQKHHGRIDDMAN---TDPMNDIIKDLNESIDKTMTAFS 221
CY+PT + ++ + R Y + G MAN P D + + S T+ S
Sbjct: 423 CYVPTSSDNMVITFRNWFRKYCKHQIGWATPMANQLPPTPTKDQVLERYRSHVMQCTSCS 482
Query: 220 KTLKKL 203
LKK+
Sbjct: 483 AALKKM 488
>03_02_0165 + 6083059-6084252,6084664-6084741
Length = 423
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 200 LQLFKCLAESCHCFINRFIEVFNDIIHGICVGHIID 307
L+L KCL E+ I + FN +IHG C+ +D
Sbjct: 320 LRLAKCLIENKG--IKYDVVAFNTLIHGFCIAGDLD 353
>08_02_0501 + 17836948-17837373,17837857-17839184,17839270-17839380,
17839719-17839998,17840275-17840396,17840451-17840556,
17840814-17841020,17841130-17841255,17841719-17841817,
17842265-17842456,17842555-17843073
Length = 1171
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Frame = -1
Query: 505 WLTYWXVYACFSIVEYFSDFIVGW-----FPLYWLLKCIFVIWCYLP 380
W T+ +Y F S + V W PLYWL + V+ +P
Sbjct: 1095 WYTFLVIYGSFPPTISTSAYHVFWEACASSPLYWLSTLVIVVTALIP 1141
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,197,943
Number of Sequences: 37544
Number of extensions: 263813
Number of successful extensions: 653
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -