Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_pT_F08
         (508 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024201-6|AAF36016.1|  183|Caenorhabditis elegans Hypothetical ...    80   8e-16
Z81113-6|CAD21647.2|  295|Caenorhabditis elegans Hypothetical pr...    71   4e-13
AF045646-11|AAK29829.1|  205|Caenorhabditis elegans Hypothetical...    62   2e-10
U28412-5|AAC46595.1|  229|Caenorhabditis elegans Hypothetical pr...    61   4e-10
AC024748-4|AAF60410.1|  251|Caenorhabditis elegans Hypothetical ...    41   6e-04
U58750-1|AAB00641.1|  307|Caenorhabditis elegans Hypothetical pr...    31   0.36 
Z48583-1|CAA88470.1|  389|Caenorhabditis elegans Hypothetical pr...    30   1.1  
U97403-3|AAB52473.1|  142|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AF078157-18|AAG24080.1|  338|Caenorhabditis elegans Seven tm rec...    29   1.9  
AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical...    28   4.5  
AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical ...    28   4.5  
AF040655-2|AAB95042.2|  306|Caenorhabditis elegans Serpentine re...    27   7.8  

>AC024201-6|AAF36016.1|  183|Caenorhabditis elegans Hypothetical
           protein Y71F9B.3 protein.
          Length = 183

 Score = 80.2 bits (189), Expect = 8e-16
 Identities = 32/69 (46%), Positives = 49/69 (71%)
 Frame = -1

Query: 508 KWLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY 329
           +WLTYW ++A  S+VE+FS  IV  FP+YWL K IF+++ YLP+ + G+  +Y+R ++P 
Sbjct: 90  QWLTYWVIFAILSVVEFFSVQIVAVFPVYWLFKSIFLLYLYLPS-FLGAAKLYHRFVKPV 148

Query: 328 YQKHHGRID 302
             +H G ID
Sbjct: 149 AARHSGSID 157


>Z81113-6|CAD21647.2|  295|Caenorhabditis elegans Hypothetical
           protein T03F6.6 protein.
          Length = 295

 Score = 71.3 bits (167), Expect = 4e-13
 Identities = 27/59 (45%), Positives = 44/59 (74%)
 Frame = -1

Query: 505 WLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPY 329
           WL YW V+  FSI+++F+  I+ +FP+YW+ K  F+++ YLP E +GS VIY+++I P+
Sbjct: 108 WLIYWTVFGAFSIIDFFAASIMSYFPIYWVAKAAFLLYLYLP-ETHGSHVIYHQLIDPF 165


>AF045646-11|AAK29829.1|  205|Caenorhabditis elegans Hypothetical
           protein F56B3.6 protein.
          Length = 205

 Score = 62.1 bits (144), Expect = 2e-10
 Identities = 23/58 (39%), Positives = 38/58 (65%)
 Frame = -1

Query: 505 WLTYWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRP 332
           WL YW  +A   +V++FS+ I+ WFP Y++ K  F+++ YLP +  GS++ Y  I+ P
Sbjct: 131 WLIYWTCFAVLYLVDFFSEAILSWFPFYYIAKACFLVYLYLP-QTQGSVMFYETIVDP 187


>U28412-5|AAC46595.1|  229|Caenorhabditis elegans Hypothetical
           protein T19C3.4 protein.
          Length = 229

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
 Frame = -1

Query: 508 KWLTYWXVYACFSIVEYFSDFIVG-WFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRP 332
           KW+ YW V+A +S +E   D ++  WFP Y+ LK +F+ W   P    G+ ++Y + + P
Sbjct: 36  KWMMYWIVFAIYSFLENLLDLVLAFWFPFYFQLKIVFIFWLLSPWT-KGASILYRKWVHP 94

Query: 331 YYQKHHGRID---DMANTDPMNDIIKDLNESI 245
              +H   ID   + A ++  N +++  ++S+
Sbjct: 95  TLNRHEKDIDALLESAKSESYNQLMRIGSKSL 126


>AC024748-4|AAF60410.1|  251|Caenorhabditis elegans Hypothetical
           protein Y110A2AR.1 protein.
          Length = 251

 Score = 40.7 bits (91), Expect = 6e-04
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
 Frame = -1

Query: 496 YWXVYACFSIVEYF-SDFIVGWF-PLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQ 323
           YW +Y  F IV++F S F V  F P Y      F +   +P     + V+Y + + P+ +
Sbjct: 39  YWTIYGSFLIVDWFLSTFYVSCFIPFYDFFILTFTVLMAIP-HIGFASVLYTKFLAPFLR 97

Query: 322 KHHGRIDDMA 293
           K+  RID+++
Sbjct: 98  KYERRIDNIS 107


>U58750-1|AAB00641.1|  307|Caenorhabditis elegans Hypothetical
           protein F55G1.7 protein.
          Length = 307

 Score = 31.5 bits (68), Expect = 0.36
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = -1

Query: 160 AVLMQSKKIIMLPVWWQIPSERPIKPARFFICFK*NL 50
           + L  S   ++LP++W++ +E P  P+RF +C + +L
Sbjct: 45  STLQSSSDEVLLPLYWKM-AENPNVPSRFMVCLRESL 80


>Z48583-1|CAA88470.1|  389|Caenorhabditis elegans Hypothetical
           protein F54B3.2 protein.
          Length = 389

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = -3

Query: 464 GVLFRFHRRLVSIVLAVKVHLRDLVLPAD*IQRVPGDLLPYHSS--LLPEAPWSYR*YGQ 291
           GV F FHRR  S+V  ++  + + +L  +        L+PY +    LP A W YR  G+
Sbjct: 182 GVQFEFHRR--SVVSKIQKTI-EFMLKLNNQTSTYSQLIPYWNPTIFLPPASWQYRKLGE 238

Query: 290 HR 285
            +
Sbjct: 239 EK 240


>U97403-3|AAB52473.1|  142|Caenorhabditis elegans Hypothetical
           protein T10E9.6 protein.
          Length = 142

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -1

Query: 496 YWXVYACFSIVEYFSDFIVGWFPLYWLLKCIFVIWCYLP 380
           YW ++  F    Y  D I+ + PLY+++K    I  +LP
Sbjct: 91  YWTIFGFF----YLFDRILEYIPLYYIIKLAVFIGLFLP 125


>AF078157-18|AAG24080.1|  338|Caenorhabditis elegans Seven tm
           receptor protein 28 protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -1

Query: 481 ACFSIVEYFSDFIVGWFPLYWLLKCIFV--IWCY 386
           AC      +S    GW  +YWLL C+ +  +W Y
Sbjct: 114 ACVLARPIWSKIFDGWKLIYWLLYCLIIGGLWSY 147


>AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical
            protein Y6B3A.1a protein.
          Length = 1628

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -1

Query: 439  GWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHG 311
            GWFP+++ L CI +  C L      SL + + I+     KHHG
Sbjct: 1221 GWFPIFFELSCI-INRCKLDVR-TRSLTVMFEIM-----KHHG 1256


>AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical
            protein Y6B3A.1a protein.
          Length = 1628

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = -1

Query: 439  GWFPLYWLLKCIFVIWCYLPTEYNGSLVIYYRIIRPYYQKHHG 311
            GWFP+++ L CI +  C L      SL + + I+     KHHG
Sbjct: 1221 GWFPIFFELSCI-INRCKLDVR-TRSLTVMFEIM-----KHHG 1256


>AF040655-2|AAB95042.2|  306|Caenorhabditis elegans Serpentine
           receptor, class x protein111 protein.
          Length = 306

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 508 KWLTYWXVYACFSIVEYFSDFI 443
           KW+T+  + AC+ I  YFS  I
Sbjct: 122 KWITFGSLSACWIIAAYFSTLI 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,746,903
Number of Sequences: 27780
Number of extensions: 249096
Number of successful extensions: 728
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)