Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F07
(715 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 217 1e-57
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 185 5e-48
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 166 2e-42
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 154 1e-38
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 126 2e-30
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 113 2e-26
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 98 1e-21
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 74 2e-14
SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25 |Sch... 27 2.7
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.5
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 27 3.5
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 4.7
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 6.1
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 26 6.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 6.1
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 6.1
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 217 bits (530), Expect = 1e-57
Identities = 98/130 (75%), Positives = 107/130 (82%)
Frame = -2
Query: 714 NFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 535
NFRALCTGEKG+GY GS FHRVIP FMLQGGDFT NGTGGKSIYG KF DENF LKH
Sbjct: 33 NFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNK 92
Query: 534 PGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 355
PG+LSMANAG +TNGSQFFITTV T WLDG+HVVFG V EGM+VVK++E+ GS SG T
Sbjct: 93 PGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRA 152
Query: 354 RIVIKDCGQI 325
RIVI CG +
Sbjct: 153 RIVIDKCGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 185 bits (451), Expect = 5e-48
Identities = 82/108 (75%), Positives = 93/108 (86%)
Frame = -2
Query: 714 NFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 535
NFRAL TGEKGFGY+GSIFHRVIPNFM+QGGD T +GTGGKSIYG++F DENF L H
Sbjct: 58 NFRALATGEKGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQR 117
Query: 534 PGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 391
PG+LSMANAG D+NGSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 118 PGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 166 bits (404), Expect = 2e-42
Identities = 81/132 (61%), Positives = 96/132 (72%), Gaps = 4/132 (3%)
Frame = -2
Query: 714 NFRALCTGEKGFG----YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTL 547
NF +LC G + G YKGS FHRVI NFMLQGGDFT NGTGG+SIYG KFEDENF L
Sbjct: 34 NFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFEL 93
Query: 546 KHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 367
KH P +LSMANAG +TNGSQFFITTV T LDG+HVVFG V++G V+ IE +++
Sbjct: 94 KHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKND 153
Query: 366 KTSKRIVIKDCG 331
+VI++CG
Sbjct: 154 DPVVPVVIEECG 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 154 bits (373), Expect = 1e-38
Identities = 74/138 (53%), Positives = 96/138 (69%), Gaps = 8/138 (5%)
Frame = -2
Query: 714 NFRALCTGE------KGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNK-FEDEN 556
NFR CTGE K GYK S FHR+I FM+QGGDF + +GTG +I+ ++ F DEN
Sbjct: 36 NFRQFCTGETLGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDEN 95
Query: 555 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFG 379
FTLKH PG+LSMANAG D+NG QFFITTV +LDG+HVVFG V+EG ++VK+IE T
Sbjct: 96 FTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPV 155
Query: 378 SQSGKTSKRIVIKDCGQI 325
+ + + I +CG++
Sbjct: 156 GANSRPKSNVAIVECGEM 173
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 126 bits (305), Expect = 2e-30
Identities = 63/109 (57%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
Frame = -2
Query: 714 NFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHT 538
NF L ++G+ Y G IFHRVIP+F++QGGD T G GG SIYG+KF+DE + L HT
Sbjct: 28 NFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDLHHT 83
Query: 537 GPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 391
G G+LSMANAG +TN SQFFIT T WLDG+H +FG VV G+ V K++
Sbjct: 84 GAGILSMANAGPNTNSSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRM 132
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 113 bits (272), Expect = 2e-26
Identities = 56/102 (54%), Positives = 72/102 (70%), Gaps = 1/102 (0%)
Frame = -2
Query: 690 EKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMA 514
E G+ Y +IFHR+I NFM+QGGD +GTGG+SI+ FEDE + LKH P +SMA
Sbjct: 487 ENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMA 544
Query: 513 NAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 388
N+G +TNGSQFFITT T WLDG+H +F G++VV +IE
Sbjct: 545 NSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIE 586
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 97.9 bits (233), Expect = 1e-21
Identities = 50/108 (46%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Frame = -2
Query: 675 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGAD 499
Y+ +IFHR I FM+QGGD + G GG+SI+G F+DE LKH G++SMAN G +
Sbjct: 312 YRNTIFHRNIARFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKN 370
Query: 498 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 355
TNGSQFFI LD +H +FG VV G+ V+ +E + S K
Sbjct: 371 TNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPK 418
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 74.1 bits (174), Expect = 2e-14
Identities = 44/100 (44%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = -2
Query: 714 NFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENF-TLKHT 538
NF LC +G+ Y G+I HRV+P F++QGGD T G GG+SIYG F E L+
Sbjct: 39 NFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGESIYGEPFAVETHPRLRFI 94
Query: 537 GPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV 418
G++ MA + N SQFFIT T +G+ +FG VV
Sbjct: 95 RRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPBC32C12.03c |ppk25||serine/threonine protein kinase Ppk25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 423
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 365 FPDWLPKVSICLTTSMPSTTFPKTTCLPS 451
FP WL K S CL +P T+ P T + S
Sbjct: 302 FP-WLKKNSFCLYLPIPLTSIPSTPSIRS 329
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.5
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 493 WFPVLHHHC 467
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 26.6 bits (56), Expect = 3.5
Identities = 13/53 (24%), Positives = 24/53 (45%)
Frame = +1
Query: 331 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEELG 489
T VFD + +L+ ++++DN +IPK+ A S + +G
Sbjct: 525 TVVFDKTGTLTVGKLSVTDISIVDNLEELLDIPKNIFWAFVKASESSSEHPIG 577
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 4.7
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 398 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 547
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 6.1
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 621 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 475
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -3
Query: 674 TRAPFSIVSSPISCCKEGTSPTITALGENPSTAISLRTRISP 549
+RA S++S I KE +P+ITA +P +A S + ISP
Sbjct: 321 SRAAASLLS--ILDSKEKNTPSITAKAGSPQSAPSKASYISP 360
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 6.1
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -3
Query: 713 TSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGENPSTAISLRTRISPLST 540
TS C + S+ S +S+PI+ TS + T++ P++ S T SPL T
Sbjct: 225 TSTSCTTS--TSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 25.4 bits (53), Expect = 8.1
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 713 TSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGENPSTAISLRTRISPLST 540
TS C + T S+ S+PI+ TS + T++ P++ S T SPL T
Sbjct: 168 TSTSCTTSTSIPPTGGSSSL-STPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 25.8 bits (54), Expect = 6.1
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +2
Query: 380 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 559
P S + +S +++ T+ P+S EV T P+ S+ A + E + G V
Sbjct: 162 PASSTEVASSYSASSTEVTSSYPASSEVATSTSSYVAPVSSSVASSSEISAGSATSYVPT 221
Query: 560 SSSNL 574
SSS++
Sbjct: 222 SSSSI 226
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,995,769
Number of Sequences: 5004
Number of extensions: 62763
Number of successful extensions: 174
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 333194204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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