Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F07
(715 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 229 2e-60
SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.) 220 8e-58
SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 3e-44
SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.) 168 4e-42
SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19) 98 7e-21
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 91 6e-19
SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 3e-18
SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24) 89 4e-18
SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23) 86 2e-17
SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05) 77 1e-14
SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2) 37 0.014
SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11) 34 0.100
SB_24760| Best HMM Match : PT (HMM E-Value=0.17) 31 0.70
SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_3760| Best HMM Match : SVA (HMM E-Value=0.19) 30 1.6
SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085) 29 2.8
SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_24028| Best HMM Match : DNA_photolyase (HMM E-Value=1.3e-39) 28 8.6
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 28 8.6
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 229 bits (559), Expect = 2e-60
Identities = 99/131 (75%), Positives = 114/131 (87%)
Frame = -2
Query: 714 NFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 535
NFR LCT EKGFGYKGS FHR+IP FM QGGDFT HNGTGGKSIYG KFEDENF LKHTG
Sbjct: 168 NFRCLCTHEKGFGYKGSSFHRIIPQFMCQGGDFTKHNGTGGKSIYGAKFEDENFVLKHTG 227
Query: 534 PGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 355
GVLSMAN+G +TNGSQFF+TT KT WLDG+HVVFGNV+EG +VV+++E GSQSGK SK
Sbjct: 228 AGVLSMANSGPNTNGSQFFLTTEKTDWLDGKHVVFGNVIEGFDVVRKMEAVGSQSGKASK 287
Query: 354 RIVIKDCGQIA 322
++VI DCG+++
Sbjct: 288 KVVIDDCGELS 298
>SB_31360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 235
Score = 220 bits (538), Expect = 8e-58
Identities = 99/130 (76%), Positives = 110/130 (84%)
Frame = -2
Query: 714 NFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 535
NFRALCTGEKGFGYKGS FHRVIP FM QGGDFT +GTGGKSIYG KF DENF LKHTG
Sbjct: 34 NFRALCTGEKGFGYKGSSFHRVIPGFMCQGGDFTRGDGTGGKSIYGAKFADENFNLKHTG 93
Query: 534 PGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 355
PG+LSMANAG TNGSQFF+ T KTSWLDG+HVVFG+V +GM+VVK+IE GS SGKTSK
Sbjct: 94 PGILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKIEKVGSDSGKTSK 153
Query: 354 RIVIKDCGQI 325
++VI D +
Sbjct: 154 KVVIADSASV 163
>SB_24678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 175 bits (426), Expect = 3e-44
Identities = 79/109 (72%), Positives = 90/109 (82%)
Frame = -2
Query: 714 NFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 535
NF AL E+GFGYK SIFHRVI NFM+QGGDFTN +GTGG SIYG F+DENF LKH G
Sbjct: 57 NFVALADKEQGFGYKDSIFHRVIKNFMIQGGDFTNKDGTGGYSIYGKYFDDENFNLKHYG 116
Query: 534 PGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 388
PG L MANAG +TNGSQF+ITT+KTSWLDG H FG V+EGM+VV++IE
Sbjct: 117 PGWLCMANAGKNTNGSQFYITTIKTSWLDGSHTCFGKVLEGMDVVRRIE 165
>SB_24677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 168 bits (408), Expect = 4e-42
Identities = 78/101 (77%), Positives = 85/101 (84%), Gaps = 2/101 (1%)
Frame = -2
Query: 699 CT--GEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGV 526
CT +KGFGYK SIFHRVI +FM+QGGDFT +GTGGKSIYG KF DENF L+H G G
Sbjct: 79 CTIESQKGFGYKNSIFHRVIQDFMIQGGDFTKGDGTGGKSIYGQKFADENFKLQHYGAGW 138
Query: 525 LSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEV 403
LSMANAG DTNGSQFFITTVKT WLDGRHVVFG V++GMEV
Sbjct: 139 LSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLKGMEV 179
>SB_51693| Best HMM Match : Pro_isomerase (HMM E-Value=3.5e-19)
Length = 99
Score = 97.9 bits (233), Expect = 7e-21
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Frame = -2
Query: 606 NGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVF 430
+GTGG+SI+G +FEDE + L+H P +SMANAG +TNGSQFFIT V T WLD +H VF
Sbjct: 2 DGTGGESIWGGEFEDEFHRNLRHDRPYTVSMANAGPNTNGSQFFITVVPTPWLDNKHTVF 61
Query: 429 GNVVEGMEVVKQI 391
G VV+GM+V +QI
Sbjct: 62 GRVVKGMDVAQQI 74
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = -2
Query: 546 KHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG 367
+H PG+LSMAN+G +TNGSQFFITTV T LDGRHVVFG V++GM+VV+++E
Sbjct: 188 EHDKPGLLSMANSGPNTNGSQFFITTVPTPHLDGRHVVFGKVLKGMDVVRELEATPVDDS 247
Query: 366 KTSKRIVIKDCGQIA 322
+I++CG++A
Sbjct: 248 SPKSPCIIEECGELA 262
>SB_24676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 89.0 bits (211), Expect = 3e-18
Identities = 40/65 (61%), Positives = 49/65 (75%)
Frame = -2
Query: 519 MANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSKRIVIK 340
MANAG DTNGSQFFITTVKTSWLDG+HVVFG V+EGM+VV+++E + K +I
Sbjct: 1 MANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKLENVNVKGSTPVKTCMID 60
Query: 339 DCGQI 325
D G +
Sbjct: 61 DSGTL 65
>SB_25950| Best HMM Match : Pro_isomerase (HMM E-Value=2.5e-24)
Length = 145
Score = 88.6 bits (210), Expect = 4e-18
Identities = 39/91 (42%), Positives = 57/91 (62%)
Frame = -2
Query: 603 GTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGN 424
G GG+S+YG FEDE+F++ H GV+ MAN G TNGSQF+IT W+D ++V FG
Sbjct: 46 GIGGESVYGPLFEDEDFSVAHNRRGVVGMANKGRHTNGSQFYITLQPAPWMDTKYVAFGQ 105
Query: 423 VVEGMEVVKQIETFGSQSGKTSKRIVIKDCG 331
V+EG+ V+ +E + + + + DCG
Sbjct: 106 VIEGLNVLDVLEGQETFNERPKVECRVADCG 136
>SB_32917| Best HMM Match : Pro_isomerase (HMM E-Value=5.1e-23)
Length = 378
Score = 86.2 bits (204), Expect = 2e-17
Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = -2
Query: 606 NGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 427
NGTGG+SIYG F DE F KH P +LSMAN G +TNGSQFFI HVVFG
Sbjct: 25 NGTGGESIYGGTFGDECFEFKHERPMLLSMANRGPNTNGSQFFII----------HVVFG 74
Query: 426 NVVEGMEVVKQIETF-GSQSGKTSKRIVIKDCGQI 325
+V++G E+V+QIE+ ++ + + + + +CG++
Sbjct: 75 HVIQGEELVRQIESLPTNEKNRPNADVKVSNCGEL 109
>SB_3070| Best HMM Match : Pro_isomerase (HMM E-Value=2.3e-05)
Length = 49
Score = 77.4 bits (182), Expect = 1e-14
Identities = 33/46 (71%), Positives = 41/46 (89%)
Frame = -2
Query: 528 VLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 391
+LSMANAG TNGSQFF+ T KTSWLDG+HVVFG+V +GM+VVK++
Sbjct: 2 ILSMANAGPGTNGSQFFLCTAKTSWLDGKHVVFGSVKDGMDVVKKM 47
>SB_23239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 52.0 bits (119), Expect = 5e-07
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Frame = -2
Query: 675 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA-D 499
Y G+ FHRVIP FM+QGG F + + ++E H G L+MA D
Sbjct: 60 YAGTQFHRVIPGFMVQGGGF---DADMQQKDTQAPIKNEADNGLHNVRGTLAMARTQVRD 116
Query: 498 TNGSQFFITTVKTSWLDG-----RHVVFGNVVEGMEVVKQI 391
+ SQFFI ++LD + VFG VV+GM+VV +I
Sbjct: 117 SATSQFFINHKDNAFLDHGSRDFGYAVFGKVVKGMDVVDKI 157
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = -2
Query: 543 HTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFG 427
H G +SMAN G ++NGSQFFI K LD ++ +FG
Sbjct: 301 HNARGTVSMANNGPNSNGSQFFICYGKQPHLDMKYTMFG 339
>SB_6440| Best HMM Match : DUF638 (HMM E-Value=6.2)
Length = 175
Score = 37.1 bits (82), Expect = 0.014
Identities = 14/40 (35%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = -2
Query: 441 HVVFGNVVEGMEVVKQIETF-GSQSGKTSKRIVIKDCGQI 325
HVVFG+V++G E+V+QIE+ ++ + + + + +CG++
Sbjct: 3 HVVFGHVIQGEELVRQIESLPTNEKNRPNADVKVSNCGEL 42
>SB_21081| Best HMM Match : Pro_isomerase (HMM E-Value=0.11)
Length = 48
Score = 34.3 bits (75), Expect = 0.100
Identities = 18/29 (62%), Positives = 18/29 (62%), Gaps = 8/29 (27%)
Frame = -2
Query: 714 NFRALCTGEKGFG--------YKGSIFHR 652
NFRALCTGEKG G YKG FHR
Sbjct: 19 NFRALCTGEKGIGPSTGKPLHYKGCPFHR 47
>SB_24760| Best HMM Match : PT (HMM E-Value=0.17)
Length = 422
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +2
Query: 401 TTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 538
TT PST P T PS+ E +T WEP P PGP
Sbjct: 34 TTGEPSTWEPMTGA-PSTWEPMTGAPSTWEPWTDGPGPYPTDGPGP 78
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 428 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 538
P TT PS+ E +T WEP+ AP+ T GP
Sbjct: 32 PFTTGEPSTWEPMTGAPSTWEPMTGAPSTWEPWTDGP 68
>SB_6387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 398 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 538
L+ + + FP TT P + + T + EPL+ P +R P P
Sbjct: 13 LSATQLTAAFPTTTTTPVTTQTTTTDVSRTEPLIELPTAQEKRKPCP 59
>SB_3760| Best HMM Match : SVA (HMM E-Value=0.19)
Length = 259
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Frame = +2
Query: 425 FPKTTCLPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 538
FP+ + LP S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPSLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_19447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1110
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
Frame = +2
Query: 425 FPKTTCLPSSQE-----VLTVVMKNWEPLVSAPALAMERTPGP 538
FP+ LP S E +LT++++N P ++APA + P P
Sbjct: 81 FPQPPLLPPSSESFDITLLTILLRNICPTLTAPATGWDALPAP 123
>SB_40118| Best HMM Match : DREPP (HMM E-Value=0.085)
Length = 512
Score = 29.5 bits (63), Expect = 2.8
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +1
Query: 331 TTVFDNDSLRGLPRLAAKGLNLLDNFHAFNNIPKDNMSAIQPGGLDSGDEE 483
T V +N + PR A +GL D F+ K+ MS I+PGG D +EE
Sbjct: 431 TKVPENVQPKPKPRRAGEGLPHSDFKSGFSY--KEYMSGIRPGGPDMEEEE 479
>SB_51093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 253
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = +2
Query: 380 PKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKF 559
P+ TTS PST+ P+T ++ T N AP+ + RT + LR
Sbjct: 87 PRTGSTTTTSAPSTSTPRTGSTTTTSAPSTSTTSN--STTRAPSTSTPRTGSTITLRTST 144
Query: 560 SS 565
+S
Sbjct: 145 TS 146
>SB_24028| Best HMM Match : DNA_photolyase (HMM E-Value=1.3e-39)
Length = 432
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/52 (23%), Positives = 26/52 (50%)
Frame = -3
Query: 713 TSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGENPSTAISLRTR 558
T+V C L ++ +S+ +SC + S T++ + ST +S +++
Sbjct: 373 TTVSCQLKALSTTVSCELKALSTTVSCQSKALSTTVSCQSKALSTTVSCQSK 424
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/57 (28%), Positives = 23/57 (40%)
Frame = +2
Query: 368 PDWLPKVSICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGP 538
P P + TT+ P TT P+TT P + T + P + P +T P
Sbjct: 1767 PPHSPPTTTTTTTTTPETTAPRTT-TPETTTPETTTPRTTTPETTKPRTTTPKTTTP 1822
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,374,593
Number of Sequences: 59808
Number of extensions: 481611
Number of successful extensions: 1340
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1889780269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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