Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F07
(715 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 217 6e-57
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 217 8e-57
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 215 2e-56
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 210 5e-55
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 208 4e-54
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 207 5e-54
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 207 6e-54
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 206 1e-53
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 195 2e-50
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 190 8e-49
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 173 1e-43
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 173 1e-43
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 167 5e-42
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 155 4e-38
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 153 8e-38
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 128 3e-30
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 122 2e-28
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 120 7e-28
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 108 3e-24
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 104 7e-23
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 99 3e-21
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 94 7e-20
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 73 1e-13
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 46 2e-05
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 38 0.009
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 38 0.009
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 38 0.009
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 36 0.035
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 33 0.14
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 31 0.57
At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B li... 28 5.3
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 28 5.3
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ... 28 7.1
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 9.3
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 9.3
At2g16030.1 68415.m01838 expressed protein 27 9.3
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ... 27 9.3
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /... 27 9.3
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 217 bits (530), Expect = 6e-57
Identities = 102/138 (73%), Positives = 113/138 (81%), Gaps = 7/138 (5%)
Frame = -2
Query: 714 NFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 556
NFRALCTGEKG G +KGS FHRVIPNFM QGGDFT NGTGG+SIYG KFEDEN
Sbjct: 36 NFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDEN 95
Query: 555 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 376
F KHTGPG+LSMANAGA+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE GS
Sbjct: 96 FERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGS 155
Query: 375 QSGKTSKRIVIKDCGQIA 322
SGK +K +VI DCG+I+
Sbjct: 156 SSGKPTKPVVIADCGEIS 173
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 217 bits (529), Expect = 8e-57
Identities = 101/138 (73%), Positives = 114/138 (82%), Gaps = 7/138 (5%)
Frame = -2
Query: 714 NFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 556
NFRALCTGEKG G +KGS FHRVIPNFM QGGDFT NGTGG+SIYG+KFEDEN
Sbjct: 35 NFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDEN 94
Query: 555 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 376
F KHTGPG+LSMANAGA+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE GS
Sbjct: 95 FERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGS 154
Query: 375 QSGKTSKRIVIKDCGQIA 322
SGK +K +V+ DCGQ++
Sbjct: 155 SSGKPTKPVVVADCGQLS 172
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 215 bits (525), Expect = 2e-56
Identities = 101/138 (73%), Positives = 113/138 (81%), Gaps = 7/138 (5%)
Frame = -2
Query: 714 NFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 556
NFRALCTGE+G G YKGS FHRVIP FM QGGDFT NGTGG+SIYG+KF+DEN
Sbjct: 36 NFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDEN 95
Query: 555 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 376
F KHTGPG+LSMANAGA+TNGSQFFI T KTSWLDG+HVVFG VVEG+ VV+ IE GS
Sbjct: 96 FIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGS 155
Query: 375 QSGKTSKRIVIKDCGQIA 322
SG+TSK +VI DCGQI+
Sbjct: 156 DSGRTSKPVVIADCGQIS 173
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 210 bits (514), Expect = 5e-55
Identities = 96/131 (73%), Positives = 108/131 (82%), Gaps = 1/131 (0%)
Frame = -2
Query: 714 NFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 535
NFRALCTGEKGFGYKGS FHRVI +FM+QGGDF NGTGGKS+YG F+DENF L H G
Sbjct: 124 NFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVG 183
Query: 534 PGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSG-KTS 358
PGVLSMANAG +TNGSQFFI T+KTSWLDGRHVVFG V+EGMEVVK IE + G +
Sbjct: 184 PGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPR 243
Query: 357 KRIVIKDCGQI 325
K++VI DCGQ+
Sbjct: 244 KKVVIADCGQL 254
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 208 bits (507), Expect = 4e-54
Identities = 98/138 (71%), Positives = 111/138 (80%), Gaps = 7/138 (5%)
Frame = -2
Query: 714 NFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 556
NFRALCTGEKG G +KGSIFHRVIP FM QGGDFT NGTGG+SIYG KF+DEN
Sbjct: 35 NFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDEN 94
Query: 555 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 376
F KHTG G+LSMAN+G +TNGSQFFI T KTSWLDG+HVVFG VV+G++VVK IE GS
Sbjct: 95 FIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGS 154
Query: 375 QSGKTSKRIVIKDCGQIA 322
SGKTSK + I DCGQ++
Sbjct: 155 DSGKTSKVVTITDCGQLS 172
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 207 bits (506), Expect = 5e-54
Identities = 95/137 (69%), Positives = 109/137 (79%), Gaps = 7/137 (5%)
Frame = -2
Query: 714 NFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 556
NFRALCTGE G G YKGS FHR+IP FM QGGDFT NGTGG+SIYG+KFEDEN
Sbjct: 35 NFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDEN 94
Query: 555 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 376
F LKHTGPG+LSMAN+G +TNGSQFFI T KTSWLDG+HVVFG VV+G VVK +E GS
Sbjct: 95 FKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGS 154
Query: 375 QSGKTSKRIVIKDCGQI 325
G S+R+VI+DCG++
Sbjct: 155 DMGNPSERVVIEDCGEL 171
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 207 bits (505), Expect = 6e-54
Identities = 97/137 (70%), Positives = 110/137 (80%), Gaps = 7/137 (5%)
Frame = -2
Query: 714 NFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 556
NFRALCTGEKG G YKGS FHR+IP+FM+QGGDFT+ NG GG+SIYG KF DEN
Sbjct: 63 NFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADEN 122
Query: 555 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 376
F LKHTGPGVLSMAN+G DTNGSQFFITTV TSWLDGRHVVFG VV+GM+VV +IE G
Sbjct: 123 FKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGK 182
Query: 375 QSGKTSKRIVIKDCGQI 325
QSG ++VI D G++
Sbjct: 183 QSGTPKSKVVIADSGEL 199
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 206 bits (503), Expect = 1e-53
Identities = 97/137 (70%), Positives = 109/137 (79%), Gaps = 7/137 (5%)
Frame = -2
Query: 714 NFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 556
NFRALCTGEKG G YKGS FHR+IP+FMLQGGDFT+ NG GG+SIYG KF DEN
Sbjct: 66 NFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADEN 125
Query: 555 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 376
F LKHTGPG LSMANAG DTNGSQFFITTV TSWLDGRHVVFG VV GM+VV ++E G+
Sbjct: 126 FKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGN 185
Query: 375 QSGKTSKRIVIKDCGQI 325
QSG ++VI D G++
Sbjct: 186 QSGTPKSKVVIVDSGEL 202
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 195 bits (476), Expect = 2e-50
Identities = 89/131 (67%), Positives = 108/131 (82%), Gaps = 1/131 (0%)
Frame = -2
Query: 714 NFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTG 535
NFRALCTGEK +GYKGS FHR+I +FM+QGGDFT NGTGG SIYG KFEDENFTLKHTG
Sbjct: 126 NFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTG 185
Query: 534 PGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTSK 355
PG+LSMANAG +TNGSQFFI TVKTSWLD +HVVFG V+EGM++V+ +E+ +++ K
Sbjct: 186 PGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPK 245
Query: 354 R-IVIKDCGQI 325
+ I CG++
Sbjct: 246 KGCRIYACGEL 256
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 190 bits (463), Expect = 8e-49
Identities = 88/138 (63%), Positives = 105/138 (76%), Gaps = 7/138 (5%)
Frame = -2
Query: 714 NFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 556
NFR+LCTGEKG G +KGS FHR+IP FM+QGGDFT +G GG+SIYG+KF DEN
Sbjct: 90 NFRSLCTGEKGVGNMGKPLYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADEN 149
Query: 555 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGS 376
F LKHTGPG LSMAN+G D+NGSQFFITTV TSWLDG HVVFG V+ GMEVV++IE G
Sbjct: 150 FKLKHTGPGFLSMANSGPDSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIEAQGQ 209
Query: 375 QSGKTSKRIVIKDCGQIA 322
SG ++I G+++
Sbjct: 210 DSGVPKANVIIFASGEVS 227
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 173 bits (421), Expect = 1e-43
Identities = 84/137 (61%), Positives = 97/137 (70%), Gaps = 8/137 (5%)
Frame = -2
Query: 714 NFRALCTGEKGFG--------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE 559
NFRALCTGE G G +KGS FHRVI FM QGGDF+N NGTGG+SIYG KF DE
Sbjct: 38 NFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDE 97
Query: 558 NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFG 379
NF L H G GVLSMAN G +TNGSQFFI + LDG+HVVFG VVEGM V+K++E G
Sbjct: 98 NFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVG 157
Query: 378 SQSGKTSKRIVIKDCGQ 328
+ GK + + I DCG+
Sbjct: 158 TSDGKPTSPVKIIDCGE 174
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 173 bits (421), Expect = 1e-43
Identities = 84/137 (61%), Positives = 97/137 (70%), Gaps = 8/137 (5%)
Frame = -2
Query: 714 NFRALCTGEKGFG--------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE 559
NFRALCTGE G G +KGS FHRVI FM QGGDF+N NGTGG+SIYG KF DE
Sbjct: 38 NFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDE 97
Query: 558 NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFG 379
NF L H G GVLSMAN G +TNGSQFFI + LDG+HVVFG VVEGM V+K++E G
Sbjct: 98 NFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVG 157
Query: 378 SQSGKTSKRIVIKDCGQ 328
+ GK + + I DCG+
Sbjct: 158 TSDGKPTSPVKIIDCGE 174
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 167 bits (407), Expect = 5e-42
Identities = 83/139 (59%), Positives = 101/139 (72%), Gaps = 9/139 (6%)
Frame = -2
Query: 714 NFRALCTGEKGFG--------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE 559
NFR LCTGEKG G YKG+ FHRVI FM+QGGD + ++GTGG+SIYG KF+DE
Sbjct: 35 NFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDE 94
Query: 558 NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFG 379
NF LKH G+LSMAN+G +TNGSQFFITT +TS LDG+HVVFG V +GM VV+ IE
Sbjct: 95 NFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVS 154
Query: 378 -SQSGKTSKRIVIKDCGQI 325
+ S+ +VI DCG+I
Sbjct: 155 IEEQSCPSQDVVIHDCGEI 173
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 155 bits (375), Expect = 4e-38
Identities = 75/138 (54%), Positives = 96/138 (69%), Gaps = 8/138 (5%)
Frame = -2
Query: 714 NFRALCTGEKG-------FGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 556
NFRALCTGEKG YKG+ FHR+I F++QGGD + +G SIYG F DEN
Sbjct: 78 NFRALCTGEKGKTSSGKPLHYKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYGGTFPDEN 137
Query: 555 FTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE-TFG 379
F ++H+ G+++MAN G D+NGSQFFITTVK SWL+G HVV G V++GM+ V IE G
Sbjct: 138 FKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVLGKVIQGMDNVFAIEGGAG 197
Query: 378 SQSGKTSKRIVIKDCGQI 325
+ SGK K++VI D G+I
Sbjct: 198 TYSGKPRKKVVIADSGEI 215
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 153 bits (372), Expect = 8e-38
Identities = 74/137 (54%), Positives = 96/137 (70%), Gaps = 7/137 (5%)
Frame = -2
Query: 714 NFRALCTGE-----KGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFT 550
NFR CTGE K GYK FHRVI +FM+Q GDF ++G+G SIYG+KFEDENFT
Sbjct: 63 NFRQFCTGELRKAGKPLGYKECQFHRVIKDFMVQSGDFLKNDGSGCMSIYGHKFEDENFT 122
Query: 549 LKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVV-EGMEVVKQIETFG-S 376
KHTGPG+LSMAN+G +TNG QFFIT K WLD +HVVFG V+ +G+ V+++IE
Sbjct: 123 AKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVMRKIENVAIG 182
Query: 375 QSGKTSKRIVIKDCGQI 325
+ + +VI +CG++
Sbjct: 183 PNNRPKLAVVITECGEM 199
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 128 bits (310), Expect = 3e-30
Identities = 65/137 (47%), Positives = 83/137 (60%), Gaps = 8/137 (5%)
Frame = -2
Query: 714 NFRALCTGEKGFG--------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE 559
NFRALCTGEKG G YKGS FHR++ Q GDF N NGT G+SIY KF DE
Sbjct: 38 NFRALCTGEKGIGPRSGKPLHYKGSFFHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDE 97
Query: 558 NFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFG 379
+ L+H G+LSM+ A D GS F IT LD +VVFG +++G E++K+IE G
Sbjct: 98 SPKLRHEETGLLSMSIADRDKFGSHFHITFRPNQQLDRNNVVFGKLIQGKEILKKIERVG 157
Query: 378 SQSGKTSKRIVIKDCGQ 328
+ GK + + I CG+
Sbjct: 158 DEEGKPTVSVKIIRCGE 174
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 122 bits (294), Expect = 2e-28
Identities = 57/96 (59%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -2
Query: 675 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 499
Y +FHR++ +F++QGGD T G GG+SIYG+KFEDE N LKHTG G+LSMANAG +
Sbjct: 46 YDNVLFHRIVKDFIVQGGDPTG-TGRGGESIYGSKFEDEINKELKHTGAGILSMANAGPN 104
Query: 498 TNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 391
TNGSQFFIT LDG+H +FG V GMEV+K++
Sbjct: 105 TNGSQFFITLAPQPSLDGKHTIFGRVCRGMEVIKRL 140
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 120 bits (290), Expect = 7e-28
Identities = 63/110 (57%), Positives = 78/110 (70%), Gaps = 1/110 (0%)
Frame = -2
Query: 714 NFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHT 538
NF C G+ Y +FHRVI FM+Q GD +GTGG+SI+G +FEDE + +L+H
Sbjct: 502 NFTTHC--RNGY-YDNHLFHRVIRGFMIQTGDPLG-DGTGGQSIWGREFEDEFHKSLRHD 557
Query: 537 GPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 388
P LSMANAG +TNGSQFFITTV T WLD +H VFG VV+GM+VV+ IE
Sbjct: 558 RPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVVKGMDVVQGIE 607
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 108 bits (260), Expect = 3e-24
Identities = 58/110 (52%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Frame = -2
Query: 714 NFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHT 538
NF ALC G+ Y G+IFHR I FM+QGGD G GG SI+G KF DE +LKH
Sbjct: 27 NFLALCAS--GY-YDGTIFHRNIKGFMIQGGD-PKGTGKGGTSIWGKKFNDEIRDSLKHN 82
Query: 537 GPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 388
G+LSMAN+G +TNGSQFFIT K L+G + +FG V+ G EV+ +E
Sbjct: 83 ARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVIHGFEVLDIME 132
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 104 bits (249), Expect = 7e-23
Identities = 56/110 (50%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Frame = -2
Query: 714 NFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHT 538
NF LC E+G+ Y G FHR I NFM+QGGD T G GG+SI+G F+DE N L H+
Sbjct: 370 NFITLC--ERGY-YNGVAFHRSIRNFMIQGGDPTG-TGKGGESIWGKPFKDEPNSKLLHS 425
Query: 537 GPGVLSMANAGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 388
G GV+SMAN+G TNGSQFF+ + L+ +H VFG VV G+ + +E
Sbjct: 426 GRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAME 475
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 99.1 bits (236), Expect = 3e-21
Identities = 60/146 (41%), Positives = 85/146 (58%), Gaps = 11/146 (7%)
Frame = -2
Query: 714 NFRALCTGEKGFG-------YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDEN 556
NFR LCTGE+G G YKGS F ++P+ M GGD N + I+ + +DE
Sbjct: 35 NFRGLCTGERGIGKCGKPIHYKGSTFDHIVPDLMWCGGDIIFEN----EPIHSEELDDEY 90
Query: 555 FTLKHT-GPGVLSMANAGADTNGSQFFITTVKTSW-LDGRHVVFGNVVEGMEVVKQI--E 388
F L H GPG++SMA D+NGSQF I +DG HVV G VVEG+++++ I E
Sbjct: 91 FILNHEDGPGIISMA----DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIEKE 146
Query: 387 TFGSQSGKTSKRIVIKDCGQIA*FKS 310
+ + SK +VI DCG+++ ++S
Sbjct: 147 VITTTTRTPSKPVVIADCGELSDYRS 172
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 94.3 bits (224), Expect = 7e-20
Identities = 50/100 (50%), Positives = 68/100 (68%), Gaps = 2/100 (2%)
Frame = -2
Query: 714 NFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHT 538
NF LC +G+ + +IFHRVIP F++QGGD T +GTGG SIYG F DE + L+ +
Sbjct: 39 NFVQLCL--EGY-FDNTIFHRVIPGFLVQGGDPTG-SGTGGDSIYGGVFADEFHSRLRFS 94
Query: 537 GPGVLSMANAGA-DTNGSQFFITTVKTSWLDGRHVVFGNV 421
G+++MANA + ++NGSQFF T K WLD +H +FG V
Sbjct: 95 HRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKHTIFGKV 134
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 73.3 bits (172), Expect = 1e-13
Identities = 51/135 (37%), Positives = 71/135 (52%), Gaps = 10/135 (7%)
Frame = -2
Query: 714 NFRALCTGEKGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIY----GNK---FEDE- 559
NF LC K Y G +FH V +F Q GD T G GG SIY G + ++DE
Sbjct: 27 NFLKLC---KIKYYNGCLFHTVQKDFTAQTGDPTG-TGAGGDSIYKFLYGEQARFYKDEI 82
Query: 558 NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFGNVVEGMEVVKQI-ET 385
+ LKH+ G ++MA+ G + N SQF+ T +LDG+H VFG + EG + + +I E
Sbjct: 83 HLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGFDTLTRINEA 142
Query: 384 FGSQSGKTSKRIVIK 340
+ + K I IK
Sbjct: 143 YVDPKNRPYKNIRIK 157
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/96 (28%), Positives = 50/96 (52%)
Frame = -2
Query: 675 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 496
+KG +F RV+ +F++Q GD + ++ + +LKH ++ A +
Sbjct: 114 FKGFLFSRVVKHFVIQAGDSAEFDAVKDWALDRKNIDT---SLKHE-EFMVGTPKAKNEQ 169
Query: 495 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 388
G +FFI + + L+ + VFG V +G +VV++IE
Sbjct: 170 GGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIE 205
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 37.5 bits (83), Expect = 0.009
Identities = 27/96 (28%), Positives = 46/96 (47%)
Frame = -2
Query: 675 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 496
+KG F RVI N+++Q G + + G + KH + + N G +
Sbjct: 117 FKGMPFQRVIKNYLVQAGHSPSSIPVEEWTAKGKLRGRLHIGPKHEAFMLGTPKNKG-NN 175
Query: 495 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 388
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 176 KDFELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 37.5 bits (83), Expect = 0.009
Identities = 27/96 (28%), Positives = 46/96 (47%)
Frame = -2
Query: 675 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 496
+KG F RVI N+++Q G + + G + KH + + N G +
Sbjct: 117 FKGMPFQRVIKNYLVQAGHSPSSIPVEEWTAKGKLRGRLHIGPKHEAFMLGTPKNKG-NN 175
Query: 495 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 388
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 176 KDFELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 37.5 bits (83), Expect = 0.009
Identities = 27/96 (28%), Positives = 46/96 (47%)
Frame = -2
Query: 675 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 496
+KG F RVI N+++Q G + + G + KH + + N G +
Sbjct: 117 FKGMPFQRVIKNYLVQAGHSPSSIPVEEWTAKGKLRGRLHIGPKHEAFMLGTPKNKG-NN 175
Query: 495 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 388
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 176 KDFELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 35.5 bits (78), Expect = 0.035
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 20/129 (15%)
Frame = -2
Query: 711 FRALCTGEKGFGYKGSIFHRVIPN--FML--QGGDF--TNHNGTGGKSIYGNK--FEDEN 556
F+ +CT YK + H++ P F+ QGG T G + + N +
Sbjct: 104 FKRMCTSSST-SYKNTPVHKIFPGQYFLAGRQGGGRRDTAEVGYSLRDLPRNTDVVNSKA 162
Query: 555 FTLKHTGPGVLSMANAGADTNGS----------QFFITTVK--TSWLDGRHVVFGNVVEG 412
F L H GV+S+ + D + +F ITT + LDG ++VFG V+EG
Sbjct: 163 FLLPHARAGVVSLCLSENDDDDDIRLDPDYRNVEFLITTGPGPSPQLDGGNIVFGTVLEG 222
Query: 411 MEVVKQIET 385
++VV I +
Sbjct: 223 LDVVTSISS 231
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = -2
Query: 495 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETFGSQSGKTS 358
NG++F IT V + L+ +V G V+EGM VV+++ + TS
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKMREVKTVRDNTS 275
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 31.5 bits (68), Expect = 0.57
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +2
Query: 389 SICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 568
++ T PS++ P TC ++E+ V+ P VS+P M TP P+C V F+SS
Sbjct: 22 AVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSPPNNMSETPDPICCSV-FTSS 75
>At5g59930.1 68418.m07515 DC1 domain-containing protein / UV-B
light-insensitive protein, putative similar to ULI3
(UV-B light insensitive) [Arabidopsis thaliana]
GI:17225050; contains Pfam profile PF03107: DC1 domain
Length = 656
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 185 LLLM*RTGYCIYFHALLVCSLLHFCYYI 102
++L R G +YF C L+HF YY+
Sbjct: 629 VILKFREGNIVYFFCSRSCFLMHFSYYL 656
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 28.3 bits (60), Expect = 5.3
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = -2
Query: 621 DFTNHNG-TGGKSIYGNKFEDENFTLKHTGPGVLSM---ANAGADTNGSQFFITTVKTSW 454
+F N N T S + + E+E KH+ L + A +G DTNG FF KT+
Sbjct: 517 NFANSNYLTERTSRWIEECEEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTA 576
Query: 453 LDGRHVVFGNVVEGMEVVKQIETFGSQ 373
+VF N + EVV++++ Q
Sbjct: 577 KKDIELVFVNPLS--EVVEKLQRADEQ 601
>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 513
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 677 VTRAPFSIVSSPISCCKEGTSPTITALG 594
VT +PF V+ P+ C EGT P G
Sbjct: 429 VTCSPFPSVNIPMCTCNEGTCPNFETHG 456
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 473 VMKNWEPLVSAPALAMERTPGPVCLR 550
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 473 VMKNWEPLVSAPALAMERTPGPVCLR 550
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At2g16030.1 68415.m01838 expressed protein
Length = 231
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 338 SLITILLEVFPDWLPKVSICLTT-SMPSTTFPKTTCLPSSQEVLTVVMKN 484
S+ T+L+ + PK I S P T FP++TC S ++ L + KN
Sbjct: 18 SIGTVLMVIMILQTPKTCISPEAPSKPHTHFPRSTCDSSPRQHLPLPKKN 67
>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 769
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +2
Query: 428 PKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFP 595
PK +PS E +V +W + A ER P P+ K ++ L DFP
Sbjct: 666 PKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDFP 721
>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 447
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 473 VMKNWEPLVSAPALAMERTPGPVCLR 550
V + W P +AP LAM R G CL+
Sbjct: 240 VSRVWLPFDNAPGLAMARAFGDFCLK 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,913,300
Number of Sequences: 28952
Number of extensions: 346936
Number of successful extensions: 863
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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