Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F05
(770 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35) 171 7e-43
SB_30177| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 4e-24
SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 5e-19
SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09) 52 4e-07
SB_19024| Best HMM Match : Thiolase_C (HMM E-Value=5.4e-36) 36 0.048
SB_1573| Best HMM Match : Thiolase_C (HMM E-Value=1.6e-40) 36 0.048
SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40) 29 5.5
SB_33413| Best HMM Match : DUF81 (HMM E-Value=0.31) 28 7.3
SB_14132| Best HMM Match : dCMP_cyt_deam (HMM E-Value=7.6e-05) 28 7.3
SB_4451| Best HMM Match : Cornifin (HMM E-Value=0.11) 28 9.6
>SB_51267| Best HMM Match : Thiolase_N (HMM E-Value=2.2e-35)
Length = 415
Score = 171 bits (415), Expect = 7e-43
Identities = 83/144 (57%), Positives = 103/144 (71%), Gaps = 1/144 (0%)
Frame = -3
Query: 765 AYEAKAFVDELVPVPVPQKRGAP-VIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNA 589
A++A F E+VPV +PQK+G P ++F EDEEYK+V+FEKF L TVF+KENGTVTA NA
Sbjct: 90 AWDAGKFKQEVVPVNIPQKKGKPDIVFEEDEEYKKVSFEKFPSLKTVFKKENGTVTAANA 149
Query: 588 STLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVR 409
STLNDG A++ V P+A IV FAD PIDFPIAPA AIPK+L +R
Sbjct: 150 STLNDGAAAVVLMTREAAEKNGVTPLASIVAFADAAVAPIDFPIAPAAAIPKVLRLAHLR 209
Query: 408 KEDVALWEINEAFSVVAVANQKLL 337
K+D+ +WEINEAFS VA+AN +L
Sbjct: 210 KDDIDMWEINEAFSAVALANINVL 233
>SB_30177| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 643
Score = 108 bits (260), Expect = 4e-24
Identities = 59/142 (41%), Positives = 81/142 (57%), Gaps = 2/142 (1%)
Frame = -3
Query: 576 DGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDV 397
DG K + P+AR+V ++ DP I P +I LE+ G +D+
Sbjct: 20 DGAAALVLASEKAVKDHGLTPLARLVSYSINGVDPAIMGIGPVPSIKCALERAGKTLDDM 79
Query: 396 ALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIGMSGARIVVHLCH-ALKKGE 220
+ E+NEAF+ +A QK LGLD SK NV+GGA++LGHP+G SGAR+ VHL H ++KG
Sbjct: 80 DIIEVNEAFAPQFLAVQKDLGLDMSKTNVNGGAIALGHPVGTSGARLTVHLTHEMMRKGL 139
Query: 219 K-GVASICNGGGGASSVMIEKM 157
K + S C GGG S M + M
Sbjct: 140 KYSIGSACIGGGQESFSMTDSM 161
>SB_12473| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 91.9 bits (218), Expect = 5e-19
Identities = 61/165 (36%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Frame = -3
Query: 765 AYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKEN-GTVTAGNA 589
A +A F DE+V V + + G + ++ E KL F + GTV+AGN
Sbjct: 194 AQKAGYFSDEIVTVSIKTRAGLTEVNSDQFPRHGCTIEGLRKLKPCFLFDGKGTVSAGNT 253
Query: 588 STLNDGXXXXXXXXXXXAKRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVR 409
S LNDG A NV P+AR+V +A DP P A K L K G +
Sbjct: 254 SGLNDGAAVVVLMPYAEANARNVSPLARVVSWAQAGVDPSVMGTGPIPATRKALSKAGWK 313
Query: 408 KEDVALWEINEAFSVVAVANQKLLGLDPSKINVHGGAVSLGHPIG 274
EDV L+E+NEAF+ + A + LGLDPSK NV L H +G
Sbjct: 314 VEDVDLFELNEAFAAQSCAVIRELGLDPSK-NVVDCETRLDHALG 357
>SB_30176| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1012
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/61 (52%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Frame = -3
Query: 765 AYEAKAFVDELVPVPVPQKRGAPVIFAEDEEYK-RVNFEKFTKLSTVFQKENGTVTAGNA 589
A+E+ AF E+VPVPV K+G P FA DE + E+ KL VF K+NGTV+AGNA
Sbjct: 851 AHESGAFTAEIVPVPVKGKKG-PEQFAVDEHPRPETTIEQLAKLPAVF-KKNGTVSAGNA 908
Query: 588 S 586
S
Sbjct: 909 S 909
>SB_25136| Best HMM Match : Thiolase_N (HMM E-Value=4.4e-09)
Length = 162
Score = 52.4 bits (120), Expect = 4e-07
Identities = 36/117 (30%), Positives = 55/117 (47%)
Frame = -3
Query: 714 QKRGAPVIFAEDEEYKRVNFEKFTKLSTVFQKENGTVTAGNASTLNDGXXXXXXXXXXXA 535
Q G + + D + ++ KL F + GT+TA N+S L DG A
Sbjct: 58 QVPGTTTVLSADNGIRVSTPQQMAKLKPAFIRPFGTITAANSSFLTDGASACLVMCEEKA 117
Query: 534 KRLNVKPIARIVGFADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSV 364
+ +KP A + +PA A PKLLEKTG++ D+ ++E +EAF+V
Sbjct: 118 LSMGLKPKAYL---------------SPAYATPKLLEKTGLKLSDIDVFEFHEAFAV 159
>SB_19024| Best HMM Match : Thiolase_C (HMM E-Value=5.4e-36)
Length = 330
Score = 35.5 bits (78), Expect = 0.048
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Frame = -3
Query: 495 FADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGL-DPSK 319
F +G C + A +L +KTG+ +DV + E+++ FS + + LGL D K
Sbjct: 9 FDEGNCIKLVGYDMTKTAAKRLFDKTGLSPKDVDVVELHDCFSTNELLTYEALGLCDEGK 68
Query: 318 -----------------INVHGGAVSLGHPIGMSG 265
+N GG +S GHP+G +G
Sbjct: 69 AGEMVDRGDNTYGGKYVVNPSGGLISKGHPLGATG 103
>SB_1573| Best HMM Match : Thiolase_C (HMM E-Value=1.6e-40)
Length = 331
Score = 35.5 bits (78), Expect = 0.048
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 18/95 (18%)
Frame = -3
Query: 495 FADGECDPIDFPIAPAVAIPKLLEKTGVRKEDVALWEINEAFSVVAVANQKLLGL-DPSK 319
F +G C + A +L +KTG+ +DV + E+++ FS + + LGL D K
Sbjct: 154 FDEGNCIKLVGYDMTKTAAKRLFDKTGLSPKDVDVVELHDCFSTNELLTYEALGLCDEGK 213
Query: 318 -----------------INVHGGAVSLGHPIGMSG 265
+N GG +S GHP+G +G
Sbjct: 214 AGEMVDRGDNTYGGKYVVNPSGGLISKGHPLGATG 248
>SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)
Length = 1740
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 185 PPPPLQIEATPF--SPFFKAWHRCTTMRAPDIPIG*PKLTAPPCTLIFD 325
P P +EA P +PF + R T + P + IG P+L P ++I D
Sbjct: 225 PDTPKLMEALPILKTPFLRENPRLMTKKPPLVVIGKPRLVFFPYSVIVD 273
>SB_33413| Best HMM Match : DUF81 (HMM E-Value=0.31)
Length = 455
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 634 RQFCKLFKINSFILFIFSKYYRSPSFLWN 720
R CK++K ++LF+FS + + +WN
Sbjct: 23 RVTCKVYKRRWYVLFVFSAAAMTSNVMWN 51
>SB_14132| Best HMM Match : dCMP_cyt_deam (HMM E-Value=7.6e-05)
Length = 423
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -3
Query: 381 NEAFSVVAVANQKLLGLDPSKINVHGGAVSL 289
N+ SV+ + + + L +D S+ +VHGG + L
Sbjct: 29 NKVGSVIVLPSDRALSVDCSRNDVHGGVIGL 59
>SB_4451| Best HMM Match : Cornifin (HMM E-Value=0.11)
Length = 1384
Score = 27.9 bits (59), Expect = 9.6
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +2
Query: 422 FSNNLGMATAGAIGKSMGSH-SPSANPTIRAIGLTFNLLAASAVINTKAAAPSFNVEALP 598
FS + + ++G + + + +++PT+ + N AS T A + V A P
Sbjct: 323 FSTTVSSTPSRSVGIAFSTTVTATSSPTVE---IALNTTVASTPSPTVEIALNTTVAATP 379
Query: 599 AVTVPFSFWNTVDNFVNFSKL-TLLYS-SSSANITGAP 706
+ TV + NTV NF+ TL Y+ +++ N T P
Sbjct: 380 SPTVEIALDNTVAATPNFTVTPTLNYTVAATPNFTVTP 417
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,169,929
Number of Sequences: 59808
Number of extensions: 436879
Number of successful extensions: 1452
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1438
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2095976575
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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