Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F04
(658 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 297 2e-80
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 297 2e-80
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 297 2e-80
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 297 3e-80
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 297 3e-80
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 297 3e-80
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 297 3e-80
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 297 3e-80
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 252 1e-66
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 202 9e-52
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 44 6e-04
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 43 0.001
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 43 0.001
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 39 0.014
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 297 bits (729), Expect = 2e-80
Identities = 135/174 (77%), Positives = 154/174 (88%)
Frame = -2
Query: 657 HTKKRKGAXKLRSLDYAERHGYIKGXVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 478
H K RKGA +LR++D+AERHGYIKG VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA
Sbjct: 19 HVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIA 78
Query: 477 PEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 298
EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 297 HNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKXQGQ 136
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHK + +
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAK 192
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -3
Query: 143 KVKRNCWPYVRGVAMNPVEHP 81
K KRNCWP VRGVAMNPVEHP
Sbjct: 190 KAKRNCWPRVRGVAMNPVEHP 210
Score = 33.1 bits (72), Expect = 0.90
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 76 GGGNHQHIGKASTVQ 32
GGGNHQHIGK ST++
Sbjct: 212 GGGNHQHIGKPSTIR 226
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 297 bits (729), Expect = 2e-80
Identities = 135/174 (77%), Positives = 154/174 (88%)
Frame = -2
Query: 657 HTKKRKGAXKLRSLDYAERHGYIKGXVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 478
H K RKGA +LR++D+AERHGYIKG VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA
Sbjct: 19 HVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIA 78
Query: 477 PEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 298
EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 297 HNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKXQGQ 136
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHK + +
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAK 192
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -3
Query: 143 KVKRNCWPYVRGVAMNPVEHP 81
K KRNCWP VRGVAMNPVEHP
Sbjct: 190 KAKRNCWPRVRGVAMNPVEHP 210
Score = 33.1 bits (72), Expect = 0.90
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 76 GGGNHQHIGKASTVQ 32
GGGNHQHIGK ST++
Sbjct: 212 GGGNHQHIGKPSTIR 226
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 297 bits (729), Expect = 2e-80
Identities = 135/174 (77%), Positives = 154/174 (88%)
Frame = -2
Query: 657 HTKKRKGAXKLRSLDYAERHGYIKGXVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 478
H K RKGA +LR++D+AERHGYIKG VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA
Sbjct: 19 HVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIA 78
Query: 477 PEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 298
EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 297 HNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKXQGQ 136
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHK + +
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAK 192
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -3
Query: 143 KVKRNCWPYVRGVAMNPVEHP 81
K KRNCWP VRGVAMNPVEHP
Sbjct: 190 KAKRNCWPRVRGVAMNPVEHP 210
Score = 33.1 bits (72), Expect = 0.90
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 76 GGGNHQHIGKASTVQ 32
GGGNHQHIGK ST++
Sbjct: 212 GGGNHQHIGKPSTIR 226
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 297 bits (728), Expect = 3e-80
Identities = 134/174 (77%), Positives = 154/174 (88%)
Frame = -2
Query: 657 HTKKRKGAXKLRSLDYAERHGYIKGXVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 478
H K RKGA +LR++D+AERHGYIKG VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA
Sbjct: 19 HVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIA 78
Query: 477 PEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 298
EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 297 HNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKXQGQ 136
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHK + +
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAK 192
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -3
Query: 143 KVKRNCWPYVRGVAMNPVEHP 81
K KRNCWP VRGVAMNPVEHP
Sbjct: 190 KAKRNCWPRVRGVAMNPVEHP 210
Score = 33.1 bits (72), Expect = 0.90
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 76 GGGNHQHIGKASTVQ 32
GGGNHQHIGK ST++
Sbjct: 212 GGGNHQHIGKPSTIR 226
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 297 bits (728), Expect = 3e-80
Identities = 134/174 (77%), Positives = 154/174 (88%)
Frame = -2
Query: 657 HTKKRKGAXKLRSLDYAERHGYIKGXVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 478
H K RKGA +LR++D+AERHGYIKG VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA
Sbjct: 19 HVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIA 78
Query: 477 PEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 298
EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 297 HNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKXQGQ 136
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHK + +
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAK 192
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -3
Query: 143 KVKRNCWPYVRGVAMNPVEHP 81
K KRNCWP VRGVAMNPVEHP
Sbjct: 190 KAKRNCWPRVRGVAMNPVEHP 210
Score = 33.1 bits (72), Expect = 0.90
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 76 GGGNHQHIGKASTVQ 32
GGGNHQHIGK ST++
Sbjct: 212 GGGNHQHIGKPSTIR 226
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 297 bits (728), Expect = 3e-80
Identities = 134/174 (77%), Positives = 154/174 (88%)
Frame = -2
Query: 657 HTKKRKGAXKLRSLDYAERHGYIKGXVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 478
H K RKGA +LR++D+AERHGYIKG VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA
Sbjct: 19 HVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIA 78
Query: 477 PEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 298
EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 297 HNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKXQGQ 136
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHK + +
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAK 192
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -3
Query: 143 KVKRNCWPYVRGVAMNPVEHP 81
K KRNCWP VRGVAMNPVEHP
Sbjct: 190 KAKRNCWPRVRGVAMNPVEHP 210
Score = 33.1 bits (72), Expect = 0.90
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 76 GGGNHQHIGKASTVQ 32
GGGNHQHIGK ST++
Sbjct: 212 GGGNHQHIGKPSTIR 226
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 297 bits (728), Expect = 3e-80
Identities = 134/174 (77%), Positives = 154/174 (88%)
Frame = -2
Query: 657 HTKKRKGAXKLRSLDYAERHGYIKGXVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 478
H K RKGA +LR++D+AERHGYIKG VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA
Sbjct: 19 HVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIA 78
Query: 477 PEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 298
EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 297 HNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKXQGQ 136
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHK + +
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAK 192
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -3
Query: 143 KVKRNCWPYVRGVAMNPVEHP 81
K KRNCWP VRGVAMNPVEHP
Sbjct: 190 KAKRNCWPRVRGVAMNPVEHP 210
Score = 33.1 bits (72), Expect = 0.90
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 76 GGGNHQHIGKASTVQ 32
GGGNHQHIGK ST++
Sbjct: 212 GGGNHQHIGKPSTIR 226
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 297 bits (728), Expect = 3e-80
Identities = 134/174 (77%), Positives = 154/174 (88%)
Frame = -2
Query: 657 HTKKRKGAXKLRSLDYAERHGYIKGXVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 478
H K RKGA +LR++D+AERHGYIKG VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA
Sbjct: 19 HVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIA 78
Query: 477 PEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 298
EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI
Sbjct: 79 AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVIS 138
Query: 297 HNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKXQGQ 136
HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHK + +
Sbjct: 139 HNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAK 192
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -3
Query: 143 KVKRNCWPYVRGVAMNPVEHP 81
K KRNCWP VRGVAMNPVEHP
Sbjct: 190 KAKRNCWPRVRGVAMNPVEHP 210
Score = 33.1 bits (72), Expect = 0.90
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 76 GGGNHQHIGKASTVQ 32
GGGNHQHIGK ST++
Sbjct: 212 GGGNHQHIGKPSTIR 226
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 252 bits (616), Expect = 1e-66
Identities = 114/146 (78%), Positives = 130/146 (89%)
Frame = -2
Query: 573 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 394
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 393 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 214
MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +V
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVV 120
Query: 213 GIVAGGGRIDKPILKAGRAYHKXQGQ 136
G+VAGGGRIDKPILKAGRAYHK + +
Sbjct: 121 GVVAGGGRIDKPILKAGRAYHKYKAK 146
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -3
Query: 143 KVKRNCWPYVRGVAMNPVEHP 81
K KRNCWP VRGVAMNPVEHP
Sbjct: 144 KAKRNCWPRVRGVAMNPVEHP 164
Score = 33.1 bits (72), Expect = 0.90
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1
Query: 76 GGGNHQHIGKASTVQ 32
GGGNHQHIGK ST++
Sbjct: 166 GGGNHQHIGKPSTIR 180
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 202 bits (493), Expect = 9e-52
Identities = 91/116 (78%), Positives = 102/116 (87%)
Frame = -2
Query: 657 HTKKRKGAXKLRSLDYAERHGYIKGXVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 478
H K RKGA +LR++D+AERHGYIKG VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA
Sbjct: 15 HVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIA 74
Query: 477 PEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 310
EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 75 AEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 43.6 bits (98), Expect = 6e-04
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 5/171 (2%)
Frame = -2
Query: 657 HTKKRKGAXKLRSLDYAERHGYIKGXVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 478
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 477 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 313
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 312 ATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 160
++ + ++LPS + + + VG V+ + I KAGR
Sbjct: 214 GVLL--RKVNGHSIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 42.7 bits (96), Expect = 0.001
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Frame = -2
Query: 657 HTKKRKGAXKLRSLDYAERHGYIKGXVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 478
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 477 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 313
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 312 ATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 160
++ ++LPS + + + VG V+ + I KAGR
Sbjct: 214 GVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 42.7 bits (96), Expect = 0.001
Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 5/171 (2%)
Frame = -2
Query: 657 HTKKRKGAXKLRSLDYAERHGYIKGXVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 478
H ++ + LR + G + V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 477 PEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNF 313
E + G + + G+ A G+ P+GA+P GT++ N+E + G + RA+G
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTC 213
Query: 312 ATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 160
++ ++LPS + + + VG V+ + I KAGR
Sbjct: 214 GVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 39.1 bits (87), Expect = 0.014
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = -2
Query: 501 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 337
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 143 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 202
Query: 336 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 160
RA+G ++ ++LPS + + + VG V+ + I KAGR
Sbjct: 203 YIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 259
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,890,279
Number of Sequences: 237096
Number of extensions: 2579836
Number of successful extensions: 5654
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5653
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -