Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P01_pT_F04
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 281 4e-76
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 36 0.025
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 28 5.1
AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical... 28 5.1
Z81031-6|CAF31465.2| 199|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81031-5|CAF31466.2| 196|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81031-4|CAF31468.2| 421|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81031-3|CAF31467.1| 455|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81031-2|CAF31464.1| 429|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81031-1|CAB02718.4| 432|Caenorhabditis elegans Hypothetical pr... 27 8.9
AF539814-1|AAN16459.1| 421|Caenorhabditis elegans tyramine rece... 27 8.9
AF539813-1|AAN16458.1| 444|Caenorhabditis elegans tyramine rece... 27 8.9
AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homo... 27 8.9
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 281 bits (688), Expect = 4e-76
Identities = 120/174 (68%), Positives = 148/174 (85%)
Frame = -2
Query: 657 HTKKRKGAXKLRSLDYAERHGYIKGXVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIA 478
H K RKGA KLR LDYAERHGYIKG VKDIIHDPGRGAPLA++ FRDPYK+KT K +A
Sbjct: 19 HNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAIIAFRDPYKYKTVKTTVVA 78
Query: 477 PEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIG 298
EG++TGQF++CG KA +++GN++PVG +PEGT +CN+E K GDRG +ARASGN+ATVI
Sbjct: 79 AEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIA 138
Query: 297 HNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKXQGQ 136
HNPD K+TR++LPSGAKKV+ S NR M+G+VAGGGR DKP+LKAGR+YHK + +
Sbjct: 139 HNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLLKAGRSYHKYKAK 192
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -3
Query: 143 KVKRNCWPYVRGVAMNPVEHP 81
K KRN WP VRGVAMNPVEHP
Sbjct: 190 KAKRNSWPRVRGVAMNPVEHP 210
Score = 31.1 bits (67), Expect = 0.72
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1
Query: 76 GGGNHQHIGKASTVQ 32
GGGNHQHIG STV+
Sbjct: 212 GGGNHQHIGHPSTVR 226
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 35.9 bits (79), Expect = 0.025
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 417 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 259
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -2
Query: 303 IGHNPDAKRTRVKLPSGAKKVL 238
IGH D +RTR LP+G KKVL
Sbjct: 57 IGHGSD-RRTRFVLPNGYKKVL 77
>AC024859-12|AAK29966.1| 477|Caenorhabditis elegans Hypothetical
protein Y71H2AM.16 protein.
Length = 477
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 103 ATPRTYGQQLRLTLXLVVCPSSFQNRFVNTSTSSNNTDH 219
++P + ++LRL V+CP FV+T SN +H
Sbjct: 388 SSPESAPRELRLPGCDVLCPMETYQEFVSTRIISNKEEH 426
>Z81031-6|CAF31465.2| 199|Caenorhabditis elegans Hypothetical
protein C02D4.2c protein.
Length = 199
Score = 27.5 bits (58), Expect = 8.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = +2
Query: 161 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 340
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 33 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMTVVGNTLVVVAVF----SYR 83
Query: 341 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 436
PL + + L ++ S +A P V F
Sbjct: 84 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 115
>Z81031-5|CAF31466.2| 196|Caenorhabditis elegans Hypothetical
protein C02D4.2d protein.
Length = 196
Score = 27.5 bits (58), Expect = 8.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = +2
Query: 161 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 340
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 30 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMTVVGNTLVVVAVF----SYR 80
Query: 341 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 436
PL + + L ++ S +A P V F
Sbjct: 81 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 112
>Z81031-4|CAF31468.2| 421|Caenorhabditis elegans Hypothetical
protein C02D4.2f protein.
Length = 421
Score = 27.5 bits (58), Expect = 8.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = +2
Query: 161 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 340
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 25 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMTVVGNTLVVVAVF----SYR 75
Query: 341 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 436
PL + + L ++ S +A P V F
Sbjct: 76 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 107
>Z81031-3|CAF31467.1| 455|Caenorhabditis elegans Hypothetical
protein C02D4.2e protein.
Length = 455
Score = 27.5 bits (58), Expect = 8.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = +2
Query: 161 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 340
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 36 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMTVVGNTLVVVAVF----SYR 86
Query: 341 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 436
PL + + L ++ S +A P V F
Sbjct: 87 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 118
>Z81031-2|CAF31464.1| 429|Caenorhabditis elegans Hypothetical
protein C02D4.2b protein.
Length = 429
Score = 27.5 bits (58), Expect = 8.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = +2
Query: 161 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 340
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 33 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMTVVGNTLVVVAVF----SYR 83
Query: 341 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 436
PL + + L ++ S +A P V F
Sbjct: 84 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 115
>Z81031-1|CAB02718.4| 432|Caenorhabditis elegans Hypothetical
protein C02D4.2a protein.
Length = 432
Score = 27.5 bits (58), Expect = 8.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = +2
Query: 161 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 340
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 36 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMTVVGNTLVVVAVF----SYR 86
Query: 341 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 436
PL + + L ++ S +A P V F
Sbjct: 87 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 118
>AF539814-1|AAN16459.1| 421|Caenorhabditis elegans tyramine
receptor short isoformSER-2a protein.
Length = 421
Score = 27.5 bits (58), Expect = 8.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = +2
Query: 161 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 340
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 25 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMAVVGNTLVVVAVF----SYR 75
Query: 341 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 436
PL + + L ++ S +A P V F
Sbjct: 76 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 107
>AF539813-1|AAN16458.1| 444|Caenorhabditis elegans tyramine
receptor long isoformSER-2 protein.
Length = 444
Score = 27.5 bits (58), Expect = 8.9
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = +2
Query: 161 LPAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARR 340
LP I ++ PP+ IPT+ L+L T+L + G + VA F + R
Sbjct: 25 LPPLDIPMTSMKPPSIIPTVELVLGTITYLV-----IIAMTVVGNTLVVVAVF----SYR 75
Query: 341 PLSPIFSSRLHTMVPSGIAPTGITFPTSRVAF 436
PL + + L ++ S +A P V F
Sbjct: 76 PLKKVQNYFLVSLAASDLAVAIFVMPLHVVTF 107
>AF220526-1|AAF43009.1| 332|Caenorhabditis elegans DNAse II homolog
F09G8.2 protein.
Length = 332
Score = 27.5 bits (58), Expect = 8.9
Identities = 23/87 (26%), Positives = 40/87 (45%)
Frame = +1
Query: 235 WQNLLGSRR*LYSCTLSIRIVSNHSGEVSRGTCQTTSITHFLFKIAHNGTLRHSSNRHHI 414
W +L+ + TL++ N SG+ TC +TS TH + ++ G L +S++ H
Sbjct: 209 WNDLISRQN---KVTLAVESWLNGSGDDIHTTCTSTSQTHDVTEMRVTG-LNFASSKDH- 263
Query: 415 SNFKSCFLSTINKLACVEPFGSNEELL 495
S + + S N + C E + L
Sbjct: 264 SKW-AVSNSQTNPIVCFEDMNRQKSQL 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,366,499
Number of Sequences: 27780
Number of extensions: 374851
Number of successful extensions: 935
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -